Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:10 (2479323): wrapper (7.7.26015): starting
05:12:10 (2479323): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 05:12:10] Arguments: --nthreads 8
[2026-03-09 05:12:10] Threads: 8
[2026-03-09 05:12:10] Checking for CVMFS
[2026-03-09 05:12:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 05:12:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 05:12:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 05:12:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 05:12:10] 2.13.3.0 8635 107642 235088 157070 0 519 31090290 40960001 24774 16776704 0 311093360 99.655 290896734 35460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-09 05:12:10] CVMFS is ok
[2026-03-09 05:12:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 05:12:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 05:12:10] Further information can be found at the LHC@home message board.
[2026-03-09 05:12:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 05:12:10] Checking for apptainer binary...
[2026-03-09 05:12:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 05:12:10] Running /usr/bin/apptainer --version
[2026-03-09 05:12:10] apptainer version 1.4.5-2.el9
[2026-03-09 05:12:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 05:12:10] c-212-8.aglt2.org
[2026-03-09 05:12:10] apptainer works
[2026-03-09 05:12:10] Set ATHENA_PROC_NUMBER=8
[2026-03-09 05:12:10] Set ATHENA_CORE_NUMBER=8
[2026-03-09 05:12:10] Starting ATLAS job with PandaID=7045087779
[2026-03-09 05:12:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 10:02:10]  *** The last 200 lines of the pilot log: ***
[2026-03-09 10:02:10] 2026-03-09 14:01:11,040 | INFO     | total number of processed events: 400 (read)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,122 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7045087779/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,123 | INFO     | extracted standard info from prmon json
[2026-03-09 10:02:10] 2026-03-09 14:01:11,123 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 10:02:10] 2026-03-09 14:01:11,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 10:02:10] 2026-03-09 14:01:11,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 10:02:10] 2026-03-09 14:01:11,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 10:02:10] 2026-03-09 14:01:11,127 | INFO     | fitting pss+swap vs Time
[2026-03-09 10:02:10] 2026-03-09 14:01:11,128 | INFO     | sum of square deviations: 7102750700.968332
[2026-03-09 10:02:10] 2026-03-09 14:01:11,130 | INFO     | sum of deviations: 20179465757.257046
[2026-03-09 10:02:10] 2026-03-09 14:01:11,130 | INFO     | mean x: 1773056218.5105634
[2026-03-09 10:02:10] 2026-03-09 14:01:11,130 | INFO     | mean y: 2517068.0809859154
[2026-03-09 10:02:10] 2026-03-09 14:01:11,130 | INFO     | intersect: -5034873198.516392
[2026-03-09 10:02:10] 2026-03-09 14:01:11,130 | INFO     | chi2: 3.1201045991109986
[2026-03-09 10:02:10] 2026-03-09 14:01:11,131 | INFO     | sum of square deviations: 6734167960.967689
[2026-03-09 10:02:10] 2026-03-09 14:01:11,132 | INFO     | sum of deviations: 58764395932.47316
[2026-03-09 10:02:10] 2026-03-09 14:01:11,133 | INFO     | mean x: 1773056066.0107527
[2026-03-09 10:02:10] 2026-03-09 14:01:11,133 | INFO     | mean y: 2532858.17562724
[2026-03-09 10:02:10] 2026-03-09 14:01:11,133 | INFO     | intersect: -15469693150.656626
[2026-03-09 10:02:10] 2026-03-09 14:01:11,133 | INFO     | chi2: 1.4687340255555879
[2026-03-09 10:02:10] 2026-03-09 14:01:11,133 | INFO     | current chi2=1.4687340255555879 (change=52.926769635413194 %)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,133 | INFO     | sum of square deviations: 6378562208.467155
[2026-03-09 10:02:10] 2026-03-09 14:01:11,135 | INFO     | sum of deviations: 57345173985.04377
[2026-03-09 10:02:10] 2026-03-09 14:01:11,135 | INFO     | mean x: 1773055913.510949
[2026-03-09 10:02:10] 2026-03-09 14:01:11,136 | INFO     | mean y: 2532249.48540146
[2026-03-09 10:02:10] 2026-03-09 14:01:11,136 | INFO     | intersect: -15937768483.260778
[2026-03-09 10:02:10] 2026-03-09 14:01:11,136 | INFO     | chi2: 1.4689984514192058
[2026-03-09 10:02:10] 2026-03-09 14:01:11,136 | INFO     | current chi2=1.4689984514192058 (change=-0.018003658866549466 %)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,136 | INFO     | right removable region: 273
[2026-03-09 10:02:10] 2026-03-09 14:01:11,136 | INFO     | sum of square deviations: 6734166130.967689
[2026-03-09 10:02:10] 2026-03-09 14:01:11,138 | INFO     | sum of deviations: -24331875556.483864
[2026-03-09 10:02:10] 2026-03-09 14:01:11,138 | INFO     | mean x: 1773056371.0107527
[2026-03-09 10:02:10] 2026-03-09 14:01:11,139 | INFO     | mean y: 2535355.8279569894
[2026-03-09 10:02:10] 2026-03-09 14:01:11,139 | INFO     | intersect: 6408939079.025846
[2026-03-09 10:02:10] 2026-03-09 14:01:11,139 | INFO     | chi2: 1.7668955471163463
[2026-03-09 10:02:10] 2026-03-09 14:01:11,139 | INFO     | current chi2=1.7668955471163463 (change=43.37063098398104 %)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,139 | INFO     | sum of square deviations: 6378558548.467155
[2026-03-09 10:02:10] 2026-03-09 14:01:11,145 | INFO     | sum of deviations: -35616265692.10219
[2026-03-09 10:02:10] 2026-03-09 14:01:11,145 | INFO     | mean x: 1773056523.510949
[2026-03-09 10:02:10] 2026-03-09 14:01:11,145 | INFO     | mean y: 2540169.200729927
[2026-03-09 10:02:10] 2026-03-09 14:01:11,145 | INFO     | intersect: 9902841585.052216
[2026-03-09 10:02:10] 2026-03-09 14:01:11,146 | INFO     | chi2: 1.6899465828157005
[2026-03-09 10:02:10] 2026-03-09 14:01:11,146 | INFO     | current chi2=1.6899465828157005 (change=4.355037536102799 %)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,146 | INFO     | left removable region: 20
[2026-03-09 10:02:10] 2026-03-09 14:01:11,146 | INFO     | sum of square deviations: 5021470960.9644375
[2026-03-09 10:02:10] 2026-03-09 14:01:11,168 | INFO     | sum of deviations: -798326120.0671933
[2026-03-09 10:02:10] 2026-03-09 14:01:11,168 | INFO     | mean x: 1773056493.0118577
[2026-03-09 10:02:10] 2026-03-09 14:01:11,168 | INFO     | mean y: 2558202.355731225
[2026-03-09 10:02:10] 2026-03-09 14:01:11,168 | INFO     | intersect: 284443196.1612596
[2026-03-09 10:02:10] 2026-03-09 14:01:11,169 | INFO     | chi2: 0.007028564360846038
[2026-03-09 10:02:10] 2026-03-09 14:01:11,169 | INFO     | current memory leak: -0.16 B/s (using 253 data points, chi2=0.01)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,169 | INFO     | could have reported an average CPU frequency of 3218 MHz (13 samples)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,169 | INFO     | ..............................
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . Timing measurements:
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . get job = 0 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . initial setup = 8 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . payload setup = 12 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . stage-in = 0 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . payload execution = 17282 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . stage-out = 2 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | . log creation = 0 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,170 | INFO     | ..............................
[2026-03-09 10:02:10] 2026-03-09 14:01:11,308 | INFO     | time since job start (17318s) is within the limit (349056.0s)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,328 | INFO     | 
[2026-03-09 10:02:10] 2026-03-09 14:01:11,328 | INFO     | job summary report
[2026-03-09 10:02:10] 2026-03-09 14:01:11,328 | INFO     | --------------------------------------------------
[2026-03-09 10:02:10] 2026-03-09 14:01:11,328 | INFO     | PanDA job id: 7045087779
[2026-03-09 10:02:10] 2026-03-09 14:01:11,328 | INFO     | task id: 48997926
[2026-03-09 10:02:10] 2026-03-09 14:01:11,328 | INFO     | errors: (none)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | pilot state: finished 
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | transexitcode: 0
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | exeerrorcode: 0
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | exeerrordiag: 
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | exitcode: 0
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | exitmsg: OK
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | cpuconsumptiontime: 44912 s
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | nevents: 400
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | neventsw: 0
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | pid: 2500917
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | pgrp: 2500917
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | corecount: 8
[2026-03-09 10:02:10] 2026-03-09 14:01:11,329 | INFO     | event service: False
[2026-03-09 10:02:10] 2026-03-09 14:01:11,334 | INFO     | sizes: {0: 2279828, 1: 2280289, 11: 2280289, 17299: 2312261, 17302: 2321259, 17304: 2321315, 17307: 2321637}
[2026-03-09 10:02:10] 2026-03-09 14:01:11,334 | INFO     | --------------------------------------------------
[2026-03-09 10:02:10] 2026-03-09 14:01:11,334 | INFO     | 
[2026-03-09 10:02:10] 2026-03-09 14:01:11,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-09 10:02:10] 2026-03-09 14:01:11,417 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | job 7045087779 has completed (purged errors)
[2026-03-09 10:02:10] 2026-03-09 14:01:11,419 | INFO     | overall cleanup function is called
[2026-03-09 10:02:10] 2026-03-09 14:01:12,429 | INFO     | --- collectZombieJob: --- 10, [2500917]
[2026-03-09 10:02:10] 2026-03-09 14:01:12,429 | INFO     | zombie collector waiting for pid 2500917
[2026-03-09 10:02:10] 2026-03-09 14:01:12,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 10:02:10] 2026-03-09 14:01:12,429 | INFO     | collected zombie processes
[2026-03-09 10:02:10] 2026-03-09 14:01:12,429 | INFO     | will attempt to kill all subprocesses of pid=2500917
[2026-03-09 10:02:10] 2026-03-09 14:01:12,980 | INFO     | process IDs to be killed: [2500917] (in reverse order)
[2026-03-09 10:02:10] 2026-03-09 14:01:13,270 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 10:02:10] 2026-03-09 14:01:13,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 10:02:10] 2026-03-09 14:01:13,293 | INFO     | did not find any defunct processes belonging to 2500917
[2026-03-09 10:02:10] 2026-03-09 14:01:13,313 | INFO     | did not find any defunct processes belonging to 2500917
[2026-03-09 10:02:10] 2026-03-09 14:01:13,314 | INFO     | ready for new job
[2026-03-09 10:02:10] 2026-03-09 14:01:13,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 10:02:10] 2026-03-09 14:01:13,316 | INFO     | **************************************
[2026-03-09 10:02:10] 2026-03-09 14:01:13,316 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 10:02:10] 2026-03-09 14:01:13,317 | INFO     | **************************************
[2026-03-09 10:02:10] 2026-03-09 14:01:13,317 | INFO     | 
[2026-03-09 10:02:10] 2026-03-09 14:01:13,322 | INFO     | architecture information:
[2026-03-09 10:02:10] 2026-03-09 14:01:13,322 | INFO     | executing command: cat /etc/os-release
[2026-03-09 10:02:10] 2026-03-09 14:01:13,376 | INFO     | cat /etc/os-release:
[2026-03-09 10:02:10] NAME="CentOS Linux"
[2026-03-09 10:02:10] VERSION="7 (Core)"
[2026-03-09 10:02:10] ID="centos"
[2026-03-09 10:02:10] ID_LIKE="rhel fedora"
[2026-03-09 10:02:10] VERSION_ID="7"
[2026-03-09 10:02:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 10:02:10] ANSI_COLOR="0;31"
[2026-03-09 10:02:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 10:02:10] HOME_URL="https://www.centos.org/"
[2026-03-09 10:02:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 10:02:10] 
[2026-03-09 10:02:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 10:02:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 10:02:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 10:02:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 10:02:10] 
[2026-03-09 10:02:10] 2026-03-09 14:01:13,376 | INFO     | **************************************
[2026-03-09 10:02:10] 2026-03-09 14:01:13,880 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-09 10:02:10] 2026-03-09 14:01:13,910 | INFO     | sufficient remaining disk space (126498111488 B)
[2026-03-09 10:02:10] 2026-03-09 14:01:13,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 10:02:10] 2026-03-09 14:01:13,910 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 10:02:10] 2026-03-09 14:01:13,910 | INFO     | update_server=False
[2026-03-09 10:02:10] 2026-03-09 14:01:13,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 10:02:10] 2026-03-09 14:01:14,340 | INFO     | all data control threads have been joined
[2026-03-09 10:02:10] 2026-03-09 14:01:14,375 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 10:02:10] 2026-03-09 14:01:14,375 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 10:02:10] 2026-03-09 14:01:14,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 10:02:10] 2026-03-09 14:01:14,375 | INFO     | will abort loop
[2026-03-09 10:02:10] 2026-03-09 14:01:14,916 | INFO     | [job] retrieve thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:14,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 10:02:10] 2026-03-09 14:01:14,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 10:02:10] 2026-03-09 14:01:15,078 | INFO     | all job control threads have been joined
[2026-03-09 10:02:10] 2026-03-09 14:01:15,094 | INFO     | all payload control threads have been joined
[2026-03-09 10:02:10] 2026-03-09 14:01:15,197 | INFO     | [payload] failed_post thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:15,228 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:15,230 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:15,345 | INFO     | [data] control thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:15,381 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:15,382 | INFO     | [job] job monitor thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:16,050 | INFO     | [data] copytool_in thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:16,084 | INFO     | [job] control thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:16,100 | INFO     | [payload] control thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:16,100 | INFO     | [payload] validate_post thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:16,209 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:16,264 | INFO     | [job] validate thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:16,345 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 10:02:10] 2026-03-09 14:01:16,935 | INFO     | [data] copytool_out thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:17,353 | INFO     | [job] queue monitor thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:18,967 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 10:02:10] 2026-03-09 14:01:45,133 | INFO     | PID=2486402 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 10:02:10] 2026-03-09 14:01:45,136 | INFO     | .. there are 30 such processes running
[2026-03-09 10:02:10] 2026-03-09 14:01:45,137 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 10:02:10] 2026-03-09 14:01:45,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 10:02:10] 2026-03-09 14:01:45,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 10:02:10] 2026-03-09 14:02:03,620 | INFO     | [monitor] cgroup control has ended
[2026-03-09 10:02:10] 2026-03-09 14:02:04,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232108746560)>', '<ExcThread(monitor, started 140231755953920)>']
[2026-03-09 10:02:10] 2026-03-09 14:02:05,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 10:02:10] 2026-03-09 14:02:05,255 | INFO     | [monitor] control thread has ended
[2026-03-09 10:02:10] 2026-03-09 14:02:09,435 | INFO     | all workflow threads have been joined
[2026-03-09 10:02:10] 2026-03-09 14:02:09,435 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 10:02:10] 2026-03-09 14:02:09,435 | INFO     | traces error code: 0
[2026-03-09 10:02:10] 2026-03-09 14:02:09,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 10:02:10] 2026-03-09 14:02:09,556 [wrapper] ==== pilot stdout END ====
[2026-03-09 10:02:10] 2026-03-09 14:02:09,563 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 10:02:10] 2026-03-09 14:02:09,566 [wrapper] pilotpid: 2486402
[2026-03-09 10:02:10] 2026-03-09 14:02:09,573 [wrapper] Pilot exit status: 0
[2026-03-09 10:02:10] 2026-03-09 14:02:09,637 [wrapper] pandaids: 7045087779
[2026-03-09 10:02:10] 2026-03-09 14:02:09,836 [wrapper] cleanup supervisor_pilot 3280721 2486403
[2026-03-09 10:02:10] 2026-03-09 14:02:09,841 [wrapper] Test setup, not cleaning
[2026-03-09 10:02:10] 2026-03-09 14:02:09,858 [wrapper] apfmon messages muted
[2026-03-09 10:02:10] 2026-03-09 14:02:09,861 [wrapper] ==== wrapper stdout END ====
[2026-03-09 10:02:10] 2026-03-09 14:02:09,862 [wrapper] ==== wrapper stderr END ====
[2026-03-09 10:02:10]  *** Error codes and diagnostics ***
[2026-03-09 10:02:10]     "exeErrorCode": 0,
[2026-03-09 10:02:10]     "exeErrorDiag": "",
[2026-03-09 10:02:10]     "pilotErrorCode": 0,
[2026-03-09 10:02:10]     "pilotErrorDiag": "",
[2026-03-09 10:02:10]  *** Listing of results directory ***
[2026-03-09 10:02:10] total 603572
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas    584627 Mar  7 09:01 pilot3.tar.gz
[2026-03-09 10:02:10] -rwx------. 1 boincer umatlas     36322 Mar  7 09:07 runpilot2-wrapper.sh
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas      5111 Mar  7 09:07 queuedata.json
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas       100 Mar  9 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 10:02:10] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 05:12 run_atlas
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas       105 Mar  9 05:12 job.xml
[2026-03-09 10:02:10] -rw-r--r--. 2 boincer umatlas 343210524 Mar  9 05:12 EVNT.48997924._000008.pool.root.1
[2026-03-09 10:02:10] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 05:12 start_atlas.sh
[2026-03-09 10:02:10] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 05:12 shared
[2026-03-09 10:02:10] -rw-r--r--. 2 boincer umatlas    597949 Mar  9 05:12 input.tar.gz
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas         0 Mar  9 05:12 boinc_lockfile
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas      2584 Mar  9 05:12 pandaJob.out
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas        57 Mar  9 05:12 setup.sh.local
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas    987066 Mar  9 05:12 agis_schedconf.cvmfs.json
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas       429 Mar  9 05:12 workernode_map.json
[2026-03-09 10:02:10] drwx------. 5 boincer umatlas      4096 Mar  9 05:12 pilot3
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas 265575043 Mar  9 09:59 HITS.48997926._000186.pool.root.1
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas       530 Mar  9 09:59 boinc_task_state.xml
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas      6959 Mar  9 10:00 init_data.xml
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas      1046 Mar  9 10:01 memory_monitor_summary.json
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas   1511578 Mar  9 10:01 agis_ddmendpoints.agis.ALL.json
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas    487618 Mar  9 10:01 log.48997926._000186.job.log.tgz.1
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas      6320 Mar  9 10:01 heartbeat.json
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas        95 Mar  9 10:01 pilot_heartbeat.json
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 10:02 boinc_mmap_file
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas        28 Mar  9 10:02 wrapper_checkpoint.txt
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas      5007 Mar  9 10:02 pilotlog.txt
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas   2183629 Mar  9 10:02 log.48997926._000186.job.log.1
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas       357 Mar  9 10:02 output.list
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas       620 Mar  9 10:02 runtime_log
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas   2693120 Mar  9 10:02 result.tar.gz
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas      9337 Mar  9 10:02 runtime_log.err
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas       654 Mar  9 10:02 fZ3KDmuU7I9n9Rq4apOajLDm4fhM0noT9bVooX4SDmykTLDmBO2rXo.diag
[2026-03-09 10:02:10] -rw-r--r--. 1 boincer umatlas     21152 Mar  9 10:02 stderr.txt
[2026-03-09 10:02:10] HITS file was successfully produced:
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas 265575043 Mar  9 09:59 shared/HITS.pool.root.1
[2026-03-09 10:02:10]  *** Contents of shared directory: ***
[2026-03-09 10:02:10] total 597760
[2026-03-09 10:02:10] -rw-r--r--. 2 boincer umatlas 343210524 Mar  9 05:12 ATLAS.root_0
[2026-03-09 10:02:10] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 05:12 start_atlas.sh
[2026-03-09 10:02:10] -rw-r--r--. 2 boincer umatlas    597949 Mar  9 05:12 input.tar.gz
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas 265575043 Mar  9 09:59 HITS.pool.root.1
[2026-03-09 10:02:10] -rw-------. 1 boincer umatlas   2693120 Mar  9 10:02 result.tar.gz
10:02:11 (2479323): run_atlas exited; CPU time 45558.106047
10:02:11 (2479323): called boinc_finish(0)

</stderr_txt>
]]>

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