Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:26:29 (4076140): wrapper (7.7.26015): starting
07:26:29 (4076140): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 07:26:29] Arguments: --nthreads 4
[2026-03-16 07:26:29] Threads: 4
[2026-03-16 07:26:29] Checking for CVMFS
[2026-03-16 07:26:29] No cvmfs_config command found, will try listing directly
[2026-03-16 07:26:29] CVMFS is ok
[2026-03-16 07:26:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 07:26:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 07:26:29] Further information can be found at the LHC@home message board.
[2026-03-16 07:26:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 07:26:29] Checking for apptainer binary...
[2026-03-16 07:26:29] which: no apptainer in ((null))
[2026-03-16 07:26:29] apptainer is not installed, using version from CVMFS
[2026-03-16 07:26:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 07:26:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-16 07:26:29] apptainer works
[2026-03-16 07:26:29] Set ATHENA_PROC_NUMBER=4
[2026-03-16 07:26:29] Set ATHENA_CORE_NUMBER=4
[2026-03-16 07:26:29] Starting ATLAS job with PandaID=7047074027
[2026-03-16 07:26:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 11:21:22]  *** The last 200 lines of the pilot log: ***
[2026-03-16 11:21:22] 2026-03-16 10:20:21,218 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2564829/.job.ad'
[2026-03-16 11:21:22] 2026-03-16 10:20:21,218 | INFO     | total number of processed events: 400 (read)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,269 | INFO     | using path: /var/lib/boinc/var/slot36/slots/7/PanDA_Pilot-7047074027/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,270 | INFO     | extracted standard info from prmon json
[2026-03-16 11:21:22] 2026-03-16 10:20:21,270 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 11:21:22] 2026-03-16 10:20:21,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 11:21:22] 2026-03-16 10:20:21,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 11:21:22] 2026-03-16 10:20:21,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 11:21:22] 2026-03-16 10:20:21,275 | INFO     | fitting pss+swap vs Time
[2026-03-16 11:21:22] 2026-03-16 10:20:21,275 | INFO     | sum of square deviations: 3772712597.5
[2026-03-16 11:21:22] 2026-03-16 10:20:21,277 | INFO     | sum of deviations: 10517849695.499996
[2026-03-16 11:21:22] 2026-03-16 10:20:21,277 | INFO     | mean x: 1773649426.5
[2026-03-16 11:21:22] 2026-03-16 10:20:21,277 | INFO     | mean y: 2328406.717391304
[2026-03-16 11:21:22] 2026-03-16 10:20:21,277 | INFO     | intersect: -4942383812.495529
[2026-03-16 11:21:22] 2026-03-16 10:20:21,278 | INFO     | chi2: 2.0573404225359866
[2026-03-16 11:21:22] 2026-03-16 10:20:21,278 | INFO     | sum of square deviations: 3531973200.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,280 | INFO     | sum of deviations: 23701799917.000008
[2026-03-16 11:21:22] 2026-03-16 10:20:21,280 | INFO     | mean x: 1773649274.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,280 | INFO     | mean y: 2336607.3777777776
[2026-03-16 11:21:22] 2026-03-16 10:20:21,280 | INFO     | intersect: -11899984796.216204
[2026-03-16 11:21:22] 2026-03-16 10:20:21,280 | INFO     | chi2: 1.3650760400427686
[2026-03-16 11:21:22] 2026-03-16 10:20:21,280 | INFO     | current chi2=1.3650760400427686 (change=33.64850925545401 %)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,281 | INFO     | sum of square deviations: 3301699115.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,282 | INFO     | sum of deviations: 23138093915.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,282 | INFO     | mean x: 1773649121.5
[2026-03-16 11:21:22] 2026-03-16 10:20:21,282 | INFO     | mean y: 2336233.9909090907
[2026-03-16 11:21:22] 2026-03-16 10:20:21,283 | INFO     | intersect: -12427282127.985193
[2026-03-16 11:21:22] 2026-03-16 10:20:21,283 | INFO     | chi2: 1.3657610243496208
[2026-03-16 11:21:22] 2026-03-16 10:20:21,283 | INFO     | current chi2=1.3657610243496208 (change=-0.0501792051694566 %)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,283 | INFO     | right removable region: 219
[2026-03-16 11:21:22] 2026-03-16 10:20:21,284 | INFO     | sum of square deviations: 3531973200.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,285 | INFO     | sum of deviations: -20224759351.999996
[2026-03-16 11:21:22] 2026-03-16 10:20:21,285 | INFO     | mean x: 1773649579.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,285 | INFO     | mean y: 2347675.368888889
[2026-03-16 11:21:22] 2026-03-16 10:20:21,285 | INFO     | intersect: 10158607046.207577
[2026-03-16 11:21:22] 2026-03-16 10:20:21,286 | INFO     | chi2: 0.7164753196662237
[2026-03-16 11:21:22] 2026-03-16 10:20:21,286 | INFO     | current chi2=0.7164753196662237 (change=65.17468320662955 %)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,286 | INFO     | sum of square deviations: 3301699115.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,288 | INFO     | sum of deviations: -19787377792.5
[2026-03-16 11:21:22] 2026-03-16 10:20:21,288 | INFO     | mean x: 1773649731.5
[2026-03-16 11:21:22] 2026-03-16 10:20:21,288 | INFO     | mean y: 2347381.440909091
[2026-03-16 11:21:22] 2026-03-16 10:20:21,288 | INFO     | intersect: 10631988692.277521
[2026-03-16 11:21:22] 2026-03-16 10:20:21,288 | INFO     | chi2: 0.7163306810228367
[2026-03-16 11:21:22] 2026-03-16 10:20:21,289 | INFO     | current chi2=0.7163306810228367 (change=0.020187526271577123 %)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,289 | INFO     | left removable region: 20
[2026-03-16 11:21:22] 2026-03-16 10:20:21,289 | INFO     | sum of square deviations: 2443580700.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,290 | INFO     | sum of deviations: -3664895677.0000005
[2026-03-16 11:21:22] 2026-03-16 10:20:21,290 | INFO     | mean x: 1773649701.0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,290 | INFO     | mean y: 2354340.226130653
[2026-03-16 11:21:22] 2026-03-16 10:20:21,291 | INFO     | intersect: 2662483846.776597
[2026-03-16 11:21:22] 2026-03-16 10:20:21,292 | INFO     | chi2: 0.006685855200544511
[2026-03-16 11:21:22] 2026-03-16 10:20:21,292 | INFO     | current memory leak: -1.50 B/s (using 199 data points, chi2=0.01)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,292 | INFO     | could have reported an average CPU frequency of 2693 MHz (11 samples)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | ..............................
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . Timing measurements:
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . get job = 0 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . initial setup = 8 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . payload setup = 9 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . stage-in = 0 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . payload execution = 13978 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . stage-out = 1 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | . log creation = 0 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,293 | INFO     | ..............................
[2026-03-16 11:21:22] 2026-03-16 10:20:21,439 | INFO     | 
[2026-03-16 11:21:22] 2026-03-16 10:20:21,440 | INFO     | job summary report
[2026-03-16 11:21:22] 2026-03-16 10:20:21,440 | INFO     | --------------------------------------------------
[2026-03-16 11:21:22] 2026-03-16 10:20:21,440 | INFO     | PanDA job id: 7047074027
[2026-03-16 11:21:22] 2026-03-16 10:20:21,440 | INFO     | task id: 48998022
[2026-03-16 11:21:22] 2026-03-16 10:20:21,440 | INFO     | errors: (none)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | pilot state: finished 
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | transexitcode: 0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | exeerrorcode: 0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | exeerrordiag: 
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | exitcode: 0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | exitmsg: OK
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | cpuconsumptiontime: 53466 s
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | nevents: 400
[2026-03-16 11:21:22] 2026-03-16 10:20:21,441 | INFO     | neventsw: 0
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | pid: 4087376
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | pgrp: 4087376
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | corecount: 4
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | event service: False
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | sizes: {0: 2279805, 1: 2280322, 12: 2280322, 13992: 2311301, 13995: 2320321, 13997: 2320699}
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | --------------------------------------------------
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | 
[2026-03-16 11:21:22] 2026-03-16 10:20:21,442 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/7
[2026-03-16 11:21:22] 2026-03-16 10:20:21,493 | INFO     | PID=4080231 has CPU usage=22.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-16 11:21:22] 2026-03-16 10:20:21,494 | INFO     | .. there are 25 such processes running
[2026-03-16 11:21:22] 2026-03-16 10:20:21,497 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,497 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,497 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 11:21:22] 2026-03-16 10:20:21,499 | INFO     | job 7047074027 has completed (purged errors)
[2026-03-16 11:21:22] 2026-03-16 10:20:21,499 | INFO     | overall cleanup function is called
[2026-03-16 11:21:22] 2026-03-16 10:20:22,508 | INFO     | --- collectZombieJob: --- 10, [4087376]
[2026-03-16 11:21:22] 2026-03-16 10:20:22,509 | INFO     | zombie collector waiting for pid 4087376
[2026-03-16 11:21:22] 2026-03-16 10:20:22,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 11:21:22] 2026-03-16 10:20:22,509 | INFO     | collected zombie processes
[2026-03-16 11:21:22] 2026-03-16 10:20:22,509 | INFO     | will attempt to kill all subprocesses of pid=4087376
[2026-03-16 11:21:22] 2026-03-16 10:20:23,394 | INFO     | process IDs to be killed: [4087376] (in reverse order)
[2026-03-16 11:21:22] 2026-03-16 10:20:23,762 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 11:21:22] 2026-03-16 10:20:23,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 11:21:22] 2026-03-16 10:20:23,795 | INFO     | did not find any defunct processes belonging to 4087376
[2026-03-16 11:21:22] 2026-03-16 10:20:23,822 | INFO     | did not find any defunct processes belonging to 4087376
[2026-03-16 11:21:22] 2026-03-16 10:20:23,822 | INFO     | ready for new job
[2026-03-16 11:21:22] 2026-03-16 10:20:23,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 11:21:22] 2026-03-16 10:20:23,825 | INFO     | **************************************
[2026-03-16 11:21:22] 2026-03-16 10:20:23,825 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 11:21:22] 2026-03-16 10:20:23,825 | INFO     | **************************************
[2026-03-16 11:21:22] 2026-03-16 10:20:23,825 | INFO     | 
[2026-03-16 11:21:22] 2026-03-16 10:20:23,834 | INFO     | architecture information:
[2026-03-16 11:21:22] 2026-03-16 10:20:23,834 | INFO     | executing command: cat /etc/os-release
[2026-03-16 11:21:22] 2026-03-16 10:20:23,867 | INFO     | cat /etc/os-release:
[2026-03-16 11:21:22] NAME="CentOS Linux"
[2026-03-16 11:21:22] VERSION="7 (Core)"
[2026-03-16 11:21:22] ID="centos"
[2026-03-16 11:21:22] ID_LIKE="rhel fedora"
[2026-03-16 11:21:22] VERSION_ID="7"
[2026-03-16 11:21:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 11:21:22] ANSI_COLOR="0;31"
[2026-03-16 11:21:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 11:21:22] HOME_URL="https://www.centos.org/"
[2026-03-16 11:21:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 11:21:22] 
[2026-03-16 11:21:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 11:21:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 11:21:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 11:21:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 11:21:22] 
[2026-03-16 11:21:22] 2026-03-16 10:20:23,867 | INFO     | **************************************
[2026-03-16 11:21:22] 2026-03-16 10:20:24,370 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/7
[2026-03-16 11:21:22] 2026-03-16 10:20:24,399 | INFO     | sufficient remaining disk space (134715801600 B)
[2026-03-16 11:21:22] 2026-03-16 10:20:24,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 11:21:22] 2026-03-16 10:20:24,400 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 11:21:22] 2026-03-16 10:20:24,400 | INFO     | update_server=False
[2026-03-16 11:21:22] 2026-03-16 10:20:24,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 11:21:22] 2026-03-16 10:20:24,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 11:21:22] 2026-03-16 10:20:24,518 | INFO     | all payload control threads have been joined
[2026-03-16 11:21:22] 2026-03-16 10:20:24,544 | INFO     | all data control threads have been joined
[2026-03-16 11:21:22] 2026-03-16 10:20:25,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 11:21:22] 2026-03-16 10:20:25,135 | INFO     | aborting loop
[2026-03-16 11:21:22] 2026-03-16 10:20:25,408 | INFO     | [job] retrieve thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,443 | INFO     | [payload] validate_post thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,450 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,524 | INFO     | [payload] control thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,551 | INFO     | [data] control thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,644 | INFO     | all job control threads have been joined
[2026-03-16 11:21:22] 2026-03-16 10:20:25,761 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,762 | INFO     | [data] copytool_in thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,781 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:25,876 | INFO     | [payload] failed_post thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:26,140 | INFO     | [job] job monitor thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:26,407 | INFO     | [data] copytool_out thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:26,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 11:21:22] 2026-03-16 10:20:26,608 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:26,650 | INFO     | [job] control thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:26,813 | INFO     | [job] validate thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:27,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 11:21:22] 2026-03-16 10:20:27,455 | INFO     | [job] queue monitor thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:31,220 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 11:21:22] 2026-03-16 10:20:54,608 | INFO     | PID=4080231 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 11:21:22] 2026-03-16 10:20:54,608 | INFO     | .. there are 25 such processes running
[2026-03-16 11:21:22] 2026-03-16 10:20:54,608 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 11:21:22] 2026-03-16 10:20:54,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 11:21:22] 2026-03-16 10:20:54,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 11:21:22] 2026-03-16 10:21:15,426 | INFO     | [monitor] cgroup control has ended
[2026-03-16 11:21:22] 2026-03-16 10:21:16,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22722662819648)>', '<ExcThread(monitor, started 22722420938496)>']
[2026-03-16 11:21:22] 2026-03-16 10:21:16,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 11:21:22] 2026-03-16 10:21:16,720 | INFO     | [monitor] control thread has ended
[2026-03-16 11:21:22] 2026-03-16 10:21:21,486 | INFO     | all workflow threads have been joined
[2026-03-16 11:21:22] 2026-03-16 10:21:21,486 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 11:21:22] 2026-03-16 10:21:21,486 | INFO     | traces error code: 0
[2026-03-16 11:21:22] 2026-03-16 10:21:21,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 11:21:22] 2026-03-16 10:21:21,634 [wrapper] ==== pilot stdout END ====
[2026-03-16 11:21:22] 2026-03-16 10:21:21,638 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 11:21:22] 2026-03-16 10:21:21,642 [wrapper] pilotpid: 4080231
[2026-03-16 11:21:22] 2026-03-16 10:21:21,645 [wrapper] Pilot exit status: 0
[2026-03-16 11:21:22] 2026-03-16 10:21:21,688 [wrapper] pandaids: 7047074027
[2026-03-16 11:21:22] 2026-03-16 10:21:21,927 [wrapper] cleanup supervisor_pilot  395638 4080232
[2026-03-16 11:21:22] 2026-03-16 10:21:21,932 [wrapper] Test setup, not cleaning
[2026-03-16 11:21:22] 2026-03-16 10:21:21,944 [wrapper] apfmon messages muted
[2026-03-16 11:21:22] 2026-03-16 10:21:21,949 [wrapper] ==== wrapper stdout END ====
[2026-03-16 11:21:22] 2026-03-16 10:21:21,956 [wrapper] ==== wrapper stderr END ====
[2026-03-16 11:21:22]  *** Error codes and diagnostics ***
[2026-03-16 11:21:22]     "exeErrorCode": 0,
[2026-03-16 11:21:22]     "exeErrorDiag": "",
[2026-03-16 11:21:22]     "pilotErrorCode": 0,
[2026-03-16 11:21:22]     "pilotErrorDiag": "",
[2026-03-16 11:21:22]  *** Listing of results directory ***
[2026-03-16 11:21:22] total 562124
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc    584627 Mar  9 08:59 pilot3.tar.gz
[2026-03-16 11:21:22] -rwx------. 1 boinc boinc     36322 Mar  9 09:02 runpilot2-wrapper.sh
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc      5111 Mar  9 09:05 queuedata.json
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc       100 Mar 16 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 11:21:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 07:26 run_atlas
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc       105 Mar 16 07:26 job.xml
[2026-03-16 11:21:22] -rw-r--r--. 2 boinc boinc 323930144 Mar 16 07:26 EVNT.48998020._000018.pool.root.1
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc      6621 Mar 16 07:26 init_data.xml
[2026-03-16 11:21:22] -rw-r--r--. 2 boinc boinc     15845 Mar 16 07:26 start_atlas.sh
[2026-03-16 11:21:22] drwxrwx--x. 2 boinc boinc      4096 Mar 16 07:26 shared
[2026-03-16 11:21:22] -rw-r--r--. 2 boinc boinc    597965 Mar 16 07:26 input.tar.gz
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc         0 Mar 16 07:26 boinc_lockfile
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc      2609 Mar 16 07:26 pandaJob.out
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc   1006471 Mar 16 07:26 agis_schedconf.cvmfs.json
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc       442 Mar 16 07:26 workernode_map.json
[2026-03-16 11:21:22] drwx------. 5 boinc boinc      4096 Mar 16 07:26 pilot3
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc 243137101 Mar 16 11:19 HITS.48998022._000453.pool.root.1
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc       530 Mar 16 11:19 boinc_task_state.xml
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc        95 Mar 16 11:20 pilot_heartbeat.json
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc      1026 Mar 16 11:20 memory_monitor_summary.json
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc   1511579 Mar 16 11:20 agis_ddmendpoints.agis.ALL.json
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc    409026 Mar 16 11:20 log.48998022._000453.job.log.tgz.1
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc      6346 Mar 16 11:20 heartbeat.json
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc      8192 Mar 16 11:21 boinc_mmap_file
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc        28 Mar 16 11:21 wrapper_checkpoint.txt
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc      4830 Mar 16 11:21 pilotlog.txt
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc   1893787 Mar 16 11:21 log.48998022._000453.job.log.1
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc       357 Mar 16 11:21 output.list
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc       620 Mar 16 11:21 runtime_log
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc   2324480 Mar 16 11:21 result.tar.gz
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc      9205 Mar 16 11:21 runtime_log.err
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc       666 Mar 16 11:21 KVANDm0kkJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZubLDmJf6Ddn.diag
[2026-03-16 11:21:22] -rw-r--r--. 1 boinc boinc     20998 Mar 16 11:21 stderr.txt
[2026-03-16 11:21:22] HITS file was successfully produced:
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc 243137101 Mar 16 11:19 shared/HITS.pool.root.1
[2026-03-16 11:21:22]  *** Contents of shared directory: ***
[2026-03-16 11:21:22] total 556660
[2026-03-16 11:21:22] -rw-r--r--. 2 boinc boinc 323930144 Mar 16 07:26 ATLAS.root_0
[2026-03-16 11:21:22] -rw-r--r--. 2 boinc boinc     15845 Mar 16 07:26 start_atlas.sh
[2026-03-16 11:21:22] -rw-r--r--. 2 boinc boinc    597965 Mar 16 07:26 input.tar.gz
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc 243137101 Mar 16 11:19 HITS.pool.root.1
[2026-03-16 11:21:22] -rw-------. 1 boinc boinc   2324480 Mar 16 11:21 result.tar.gz
11:21:24 (4076140): run_atlas exited; CPU time 54392.369459
11:21:24 (4076140): called boinc_finish(0)

</stderr_txt>
]]>

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