Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:39:43 (2121464): wrapper (7.7.26015): starting
14:39:43 (2121464): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 14:39:43] Arguments: --nthreads 4
[2026-03-09 14:39:43] Threads: 4
[2026-03-09 14:39:43] Checking for CVMFS
[2026-03-09 14:39:43] No cvmfs_config command found, will try listing directly
[2026-03-09 14:39:43] CVMFS is ok
[2026-03-09 14:39:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 14:39:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 14:39:43] Further information can be found at the LHC@home message board.
[2026-03-09 14:39:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 14:39:43] Checking for apptainer binary...
[2026-03-09 14:39:43] which: no apptainer in ((null))
[2026-03-09 14:39:43] apptainer is not installed, using version from CVMFS
[2026-03-09 14:39:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 14:39:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 14:39:44] apptainer works
[2026-03-09 14:39:44] Set ATHENA_PROC_NUMBER=4
[2026-03-09 14:39:44] Set ATHENA_CORE_NUMBER=4
[2026-03-09 14:39:44] Starting ATLAS job with PandaID=7047073535
[2026-03-09 14:39:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:29:20 (3403853): wrapper (7.7.26015): starting
16:29:20 (3403853): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 16:29:20] Arguments: --nthreads 4
[2026-03-09 16:29:20] Threads: 4
[2026-03-09 16:29:20] This job has been restarted, cleaning up previous attempt
[2026-03-09 16:29:20] Checking for CVMFS
[2026-03-09 16:29:20] No cvmfs_config command found, will try listing directly
[2026-03-09 16:29:20] CVMFS is ok
[2026-03-09 16:29:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:29:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:29:20] Further information can be found at the LHC@home message board.
[2026-03-09 16:29:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:29:20] Checking for apptainer binary...
[2026-03-09 16:29:20] which: no apptainer in ((null))
[2026-03-09 16:29:20] apptainer is not installed, using version from CVMFS
[2026-03-09 16:29:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:29:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 16:29:20] apptainer works
[2026-03-09 16:29:20] Set ATHENA_PROC_NUMBER=4
[2026-03-09 16:29:20] Set ATHENA_CORE_NUMBER=4
[2026-03-09 16:29:20] Starting ATLAS job with PandaID=7047073535
[2026-03-09 16:29:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:16:59]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:16:59] 2026-03-09 17:16:26,120 | INFO     | intersect: -52359452591.91573
[2026-03-09 18:16:59] 2026-03-09 17:16:26,120 | INFO     | chi2: 1.118355153057214
[2026-03-09 18:16:59] 2026-03-09 17:16:26,120 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,120 | INFO     | sum of deviations: 10080572781.5
[2026-03-09 18:16:59] 2026-03-09 17:16:26,120 | INFO     | mean x: 1773073207.5
[2026-03-09 18:16:59] 2026-03-09 17:16:26,120 | INFO     | mean y: 2322405.83
[2026-03-09 18:16:59] 2026-03-09 17:16:26,120 | INFO     | intersect: -57644700609.1769
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | chi2: 1.1200856605348997
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | current chi2=1.1200856605348997 (change=-0.1547368448166957 %)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | right removable region: 99
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | sum of deviations: 248388645.00000006
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | mean x: 1773073512.5
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | mean y: 2355358.54
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | intersect: -1418086585.429508
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | chi2: 0.0009613561539210056
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | current chi2=0.0009613561539210056 (change=99.91403838473914 %)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,121 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | sum of deviations: -140712848.00000003
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | mean x: 1773073665.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | mean y: 2356691.557894737
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | intersect: 940911019.4048833
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | chi2: 0.00033155710197084405
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | current chi2=0.00033155710197084405 (change=65.5115223823607 %)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | sum of square deviations: 226022842.5
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | sum of deviations: -247585671.5
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | mean x: 1773073817.5
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | mean y: 2357093.3666666667
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | intersect: 1944584112.8538935
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | chi2: 0.00021854197423267185
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | current chi2=0.00021854197423267185 (change=34.086173110570364 %)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,122 | INFO     | sum of square deviations: 190403570.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | sum of deviations: -269181593.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | mean x: 1773073970.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | mean y: 2357184.411764706
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | intersect: 2509026968.762101
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | chi2: 0.00019313674053585494
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | current chi2=0.00019313674053585494 (change=11.624876084339338 %)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | left removable region: 40
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | sum of square deviations: 63666310.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | sum of deviations: 580109.9999999991
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | mean x: 1773074397.0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | mean y: 2355377.2033898304
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | intersect: -13800391.6552682
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | chi2: 9.803008913866663e-05
[2026-03-09 18:16:59] 2026-03-09 17:16:26,123 | INFO     | current memory leak: 0.01 B/s (using 59 data points, chi2=0.00)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | could have reported an average CPU frequency of 3597 MHz (7 samples)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | ..............................
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . Timing measurements:
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . get job = 0 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . initial setup = 0 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . payload setup = 4 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . stage-in = 0 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . payload execution = 6397 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . stage-out = 1 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | . log creation = 0 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,124 | INFO     | ..............................
[2026-03-09 18:16:59] 2026-03-09 17:16:26,171 | INFO     | 
[2026-03-09 18:16:59] 2026-03-09 17:16:26,171 | INFO     | job summary report
[2026-03-09 18:16:59] 2026-03-09 17:16:26,171 | INFO     | --------------------------------------------------
[2026-03-09 18:16:59] 2026-03-09 17:16:26,171 | INFO     | PanDA job id: 7047073535
[2026-03-09 18:16:59] 2026-03-09 17:16:26,171 | INFO     | task id: 48998022
[2026-03-09 18:16:59] 2026-03-09 17:16:26,171 | INFO     | errors: (none)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | pilot state: finished 
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | transexitcode: 0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | exeerrorcode: 0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | exeerrordiag: 
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | exitcode: 0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | exitmsg: OK
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | cpuconsumptiontime: 24718 s
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | nevents: 400
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | neventsw: 0
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | pid: 3411521
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | pgrp: 3411521
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | corecount: 4
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | event service: False
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | sizes: {0: 2279861, 1: 2280322, 11: 2280322, 6405: 2307243, 6406: 2307242, 6407: 2316640}
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | --------------------------------------------------
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | 
[2026-03-09 18:16:59] 2026-03-09 17:16:26,172 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/6
[2026-03-09 18:16:59] 2026-03-09 17:16:26,189 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,189 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,189 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,189 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | job 7047073535 has completed (purged errors)
[2026-03-09 18:16:59] 2026-03-09 17:16:26,190 | INFO     | overall cleanup function is called
[2026-03-09 18:16:59] 2026-03-09 17:16:26,279 | WARNING  | process 3411521 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 18:16:59] 2026-03-09 17:16:26,813 | INFO     | PID=3408401 has CPU usage=16.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 18:16:59] 2026-03-09 17:16:26,813 | INFO     | .. there are 57 such processes running
[2026-03-09 18:16:59] 2026-03-09 17:16:26,913 | INFO     | using path: /var/lib/boinc/var/slot16/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:16:59] 2026-03-09 17:16:27,198 | INFO     | --- collectZombieJob: --- 10, [3411521]
[2026-03-09 18:16:59] 2026-03-09 17:16:27,198 | INFO     | zombie collector waiting for pid 3411521
[2026-03-09 18:16:59] 2026-03-09 17:16:27,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:16:59] 2026-03-09 17:16:27,199 | INFO     | collected zombie processes
[2026-03-09 18:16:59] 2026-03-09 17:16:27,199 | INFO     | will attempt to kill all subprocesses of pid=3411521
[2026-03-09 18:16:59] 2026-03-09 17:16:27,544 | INFO     | number of running child processes to parent process 3411521: 1
[2026-03-09 18:16:59] 2026-03-09 17:16:27,544 | INFO     | maximum number of monitored processes: 6
[2026-03-09 18:16:59] 2026-03-09 17:16:27,544 | INFO     | aborting job monitoring since job object (job id=7047073535) has expired
[2026-03-09 18:16:59] 2026-03-09 17:16:27,807 | INFO     | process IDs to be killed: [3411521] (in reverse order)
[2026-03-09 18:16:59] 2026-03-09 17:16:28,003 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:16:59] 2026-03-09 17:16:28,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:16:59] 2026-03-09 17:16:28,030 | INFO     | did not find any defunct processes belonging to 3411521
[2026-03-09 18:16:59] 2026-03-09 17:16:28,054 | INFO     | did not find any defunct processes belonging to 3411521
[2026-03-09 18:16:59] 2026-03-09 17:16:28,054 | INFO     | ready for new job
[2026-03-09 18:16:59] 2026-03-09 17:16:28,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:16:59] 2026-03-09 17:16:28,055 | INFO     | **************************************
[2026-03-09 18:16:59] 2026-03-09 17:16:28,056 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:16:59] 2026-03-09 17:16:28,056 | INFO     | **************************************
[2026-03-09 18:16:59] 2026-03-09 17:16:28,056 | INFO     | 
[2026-03-09 18:16:59] 2026-03-09 17:16:28,061 | INFO     | architecture information:
[2026-03-09 18:16:59] 2026-03-09 17:16:28,061 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:16:59] 2026-03-09 17:16:28,072 | INFO     | cat /etc/os-release:
[2026-03-09 18:16:59] NAME="CentOS Linux"
[2026-03-09 18:16:59] VERSION="7 (Core)"
[2026-03-09 18:16:59] ID="centos"
[2026-03-09 18:16:59] ID_LIKE="rhel fedora"
[2026-03-09 18:16:59] VERSION_ID="7"
[2026-03-09 18:16:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:16:59] ANSI_COLOR="0;31"
[2026-03-09 18:16:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:16:59] HOME_URL="https://www.centos.org/"
[2026-03-09 18:16:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:16:59] 
[2026-03-09 18:16:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:16:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:16:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:16:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:16:59] 
[2026-03-09 18:16:59] 2026-03-09 17:16:28,072 | INFO     | **************************************
[2026-03-09 18:16:59] 2026-03-09 17:16:28,574 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/6
[2026-03-09 18:16:59] 2026-03-09 17:16:28,588 | INFO     | sufficient remaining disk space (20645412864 B)
[2026-03-09 18:16:59] 2026-03-09 17:16:28,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:16:59] 2026-03-09 17:16:28,588 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:16:59] 2026-03-09 17:16:28,588 | INFO     | update_server=False
[2026-03-09 18:16:59] 2026-03-09 17:16:28,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:16:59] 2026-03-09 17:16:28,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:16:59] 2026-03-09 17:16:28,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:16:59] 2026-03-09 17:16:28,589 | INFO     | aborting loop
[2026-03-09 18:16:59] 2026-03-09 17:16:28,689 | INFO     | all payload control threads have been joined
[2026-03-09 18:16:59] 2026-03-09 17:16:29,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:16:59] 2026-03-09 17:16:29,593 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:29,595 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:29,608 | INFO     | all data control threads have been joined
[2026-03-09 18:16:59] 2026-03-09 17:16:29,695 | INFO     | [payload] control thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:29,706 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:30,096 | INFO     | all job control threads have been joined
[2026-03-09 18:16:59] 2026-03-09 17:16:30,264 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:30,606 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:30,613 | INFO     | [data] control thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:30,805 | INFO     | [job] validate thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:30,860 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:30,899 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:31,040 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:31,042 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:31,101 | INFO     | [job] control thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:31,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:16:59] 2026-03-09 17:16:32,188 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:32,596 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:38,371 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:16:59] 2026-03-09 17:16:39,103 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:16:59] 2026-03-09 17:16:40,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:16:59] 2026-03-09 17:16:42,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22896281818944)>', '<ExcThread(monitor, started 22896044152576)>']
[2026-03-09 18:16:59] 2026-03-09 17:16:47,161 | INFO     | all workflow threads have been joined
[2026-03-09 18:16:59] 2026-03-09 17:16:47,161 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:16:59] 2026-03-09 17:16:47,162 | INFO     | traces error code: 0
[2026-03-09 18:16:59] 2026-03-09 17:16:47,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:16:59] 2026-03-09 17:16:59,359 | INFO     | PID=3408401 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 18:16:59] 2026-03-09 17:16:59,360 | INFO     | .. there are 57 such processes running
[2026-03-09 18:16:59] 2026-03-09 17:16:59,360 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:16:59] 2026-03-09 17:16:59,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:16:59] 2026-03-09 17:16:59,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:16:59] 2026-03-09 17:16:59,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:16:59] 2026-03-09 17:16:59,360 | INFO     | [monitor] control thread has ended
[2026-03-09 18:16:59] 2026-03-09 17:16:59,472 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:16:59] 2026-03-09 17:16:59,474 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:16:59] 2026-03-09 17:16:59,476 [wrapper] pilotpid: 3408401
[2026-03-09 18:16:59] 2026-03-09 17:16:59,478 [wrapper] Pilot exit status: 0
[2026-03-09 18:16:59] 2026-03-09 17:16:59,485 [wrapper] pandaids: 7047073535 7047073535
[2026-03-09 18:16:59] 2026-03-09 17:16:59,600 [wrapper] cleanup supervisor_pilot  349946 3408402
[2026-03-09 18:16:59] 2026-03-09 17:16:59,606 [wrapper] Test setup, not cleaning
[2026-03-09 18:16:59] 2026-03-09 17:16:59,609 [wrapper] apfmon messages muted
[2026-03-09 18:16:59] 2026-03-09 17:16:59,612 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:16:59] 2026-03-09 17:16:59,614 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:16:59]  *** Error codes and diagnostics ***
[2026-03-09 18:16:59]     "exeErrorCode": 0,
[2026-03-09 18:16:59]     "exeErrorDiag": "",
[2026-03-09 18:16:59]     "pilotErrorCode": 0,
[2026-03-09 18:16:59]     "pilotErrorDiag": "",
[2026-03-09 18:16:59]  *** Listing of results directory ***
[2026-03-09 18:16:59] total 871820
[2026-03-09 18:16:59] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc    584627 Mar  9 08:59 pilot3.tar.gz
[2026-03-09 18:16:59] -rwx------. 1 boinc boinc     36322 Mar  9 09:02 runpilot2-wrapper.sh
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc      5111 Mar  9 09:04 queuedata.json
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc       100 Mar  9 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:16:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 14:39 run_atlas
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc       105 Mar  9 14:39 job.xml
[2026-03-09 18:16:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:39 start_atlas.sh
[2026-03-09 18:16:59] drwxrwx--x. 2 boinc boinc      4096 Mar  9 14:39 shared
[2026-03-09 18:16:59] -rw-r--r--. 2 boinc boinc    597973 Mar  9 14:39 input.tar.gz
[2026-03-09 18:16:59] -rw-r--r--. 3 boinc boinc 323813395 Mar  9 14:39 EVNT.48998020._000013.pool.root.1
[2026-03-09 18:16:59] -rw-r--r--. 3 boinc boinc 323813395 Mar  9 14:39 ATLAS.root_0
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc         0 Mar  9 14:39 boinc_lockfile
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc      6709 Mar  9 16:29 init_data.xml
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc      2609 Mar  9 16:29 pandaJob.out
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc   1002554 Mar  9 16:29 agis_schedconf.cvmfs.json
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc       437 Mar  9 16:29 workernode_map.json
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc 238753604 Mar  9 18:15 HITS.48998022._000313.pool.root.1
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc       531 Mar  9 18:16 boinc_task_state.xml
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc      1031 Mar  9 18:16 memory_monitor_summary.json
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc   1511578 Mar  9 18:16 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc    286205 Mar  9 18:16 log.48998022._000313.job.log.tgz.1
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc      6341 Mar  9 18:16 heartbeat.json
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc      8192 Mar  9 18:16 boinc_mmap_file
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc        28 Mar  9 18:16 wrapper_checkpoint.txt
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc       823 Mar  9 18:16 pilotlog.txt
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc        97 Mar  9 18:16 pilot_heartbeat.json
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc    929045 Mar  9 18:16 log.48998022._000313.job.log.1
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc       357 Mar  9 18:16 output.list
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc       620 Mar  9 18:16 runtime_log
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc   1228800 Mar  9 18:16 result.tar.gz
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc      9281 Mar  9 18:16 runtime_log.err
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc       789 Mar  9 18:16 2K7NDmzkkJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmftbLDmuvphzm.diag
[2026-03-09 18:16:59] -rw-r--r--. 1 boinc boinc     22876 Mar  9 18:16 stderr.txt
[2026-03-09 18:16:59] HITS file was successfully produced:
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc 238753604 Mar  9 18:15 shared/HITS.pool.root.1
[2026-03-09 18:16:59]  *** Contents of shared directory: ***
[2026-03-09 18:16:59] total 551196
[2026-03-09 18:16:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:39 start_atlas.sh
[2026-03-09 18:16:59] -rw-r--r--. 2 boinc boinc    597973 Mar  9 14:39 input.tar.gz
[2026-03-09 18:16:59] -rw-r--r--. 3 boinc boinc 323813395 Mar  9 14:39 ATLAS.root_0
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc 238753604 Mar  9 18:15 HITS.pool.root.1
[2026-03-09 18:16:59] -rw-------. 1 boinc boinc   1228800 Mar  9 18:16 result.tar.gz
18:17:00 (3403853): run_atlas exited; CPU time 24959.308994
18:17:00 (3403853): called boinc_finish(0)

</stderr_txt>
]]>

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