Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:03:21 (573782): wrapper (7.7.26015): starting
01:03:21 (573782): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 01:03:21] Arguments: --nthreads 4
[2026-03-10 01:03:21] Threads: 4
[2026-03-10 01:03:21] Checking for CVMFS
[2026-03-10 01:03:21] No cvmfs_config command found, will try listing directly
[2026-03-10 01:03:21] CVMFS is ok
[2026-03-10 01:03:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 01:03:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 01:03:21] Further information can be found at the LHC@home message board.
[2026-03-10 01:03:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 01:03:21] Checking for apptainer binary...
[2026-03-10 01:03:21] which: no apptainer in ((null))
[2026-03-10 01:03:21] apptainer is not installed, using version from CVMFS
[2026-03-10 01:03:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 01:03:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-10 01:03:21] apptainer works
[2026-03-10 01:03:21] Set ATHENA_PROC_NUMBER=4
[2026-03-10 01:03:21] Set ATHENA_CORE_NUMBER=4
[2026-03-10 01:03:21] Starting ATLAS job with PandaID=7040758801
[2026-03-10 01:03:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 02:22:46]  *** The last 200 lines of the pilot log: ***
[2026-03-10 02:22:46]  guid=f8d06c11-669b-4640-ad4d-d7435a83b9b7
[2026-03-10 02:22:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 02:22:46]  is_altstaged=None
[2026-03-10 02:22:46]  is_tar=False
[2026-03-10 02:22:46]  lfn=log.48955006._033996.job.log.tgz.1
[2026-03-10 02:22:46]  mtime=0
[2026-03-10 02:22:46]  protocol_id=None
[2026-03-10 02:22:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 02:22:46]  replicas=None
[2026-03-10 02:22:46]  scope=mc23_13p6TeV
[2026-03-10 02:22:46]  status=None
[2026-03-10 02:22:46]  status_code=0
[2026-03-10 02:22:46]  storage_token=
[2026-03-10 02:22:46]  surl=/var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758801/log.48955006._033996.job.log.tgz.1
[2026-03-10 02:22:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/4d/log.48955006._033996.job.log.tgz.1
[2026-03-10 02:22:46]  workdir=None
[2026-03-10 02:22:46] ]
[2026-03-10 02:22:46] 2026-03-10 01:21:51,087 | INFO     | transferring file log.48955006._033996.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758801/log.48955006._033996.job.log.tgz.1 to /var/lib/b
[2026-03-10 02:22:46] 2026-03-10 01:21:51,087 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758801/log.48955006._033996.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/2/lo
[2026-03-10 02:22:46] 2026-03-10 01:21:51,104 | INFO     | adding to output.list: log.48955006._033996.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/4d/log.48955006._033996.job.log.tg
[2026-03-10 02:22:46] 2026-03-10 01:21:51,105 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 02:22:46] 2026-03-10 01:21:51,105 | INFO     | summary of transferred files:
[2026-03-10 02:22:46] 2026-03-10 01:21:51,105 | INFO     |  -- lfn=log.48955006._033996.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 02:22:46] 2026-03-10 01:21:51,105 | INFO     | stage-out finished correctly
[2026-03-10 02:22:46] 2026-03-10 01:21:52,237 | INFO     | time since job start (4699s) is within the limit (349056.0s)
[2026-03-10 02:22:46] 2026-03-10 01:21:52,715 | INFO     | monitor loop #343: job 0:7040758801 is in state 'finished'
[2026-03-10 02:22:46] 2026-03-10 01:21:52,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 02:22:46] 2026-03-10 01:21:53,193 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 02:22:46] 2026-03-10 01:21:54,242 | INFO     | time since job start (4701s) is within the limit (349056.0s)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,922 | INFO     | job 7040758801 has state=finished
[2026-03-10 02:22:46] 2026-03-10 01:21:54,923 | INFO     | preparing for final server update for job 7040758801 in state='finished'
[2026-03-10 02:22:46] 2026-03-10 01:21:54,923 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758801/jobReport.json
[2026-03-10 02:22:46] 2026-03-10 01:21:54,924 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/2/workernode_map.json
[2026-03-10 02:22:46] 2026-03-10 01:21:54,925 | INFO     | this job has now completed (state=finished)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,925 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,925 | INFO     | log transfer has been attempted: DONE
[2026-03-10 02:22:46] 2026-03-10 01:21:54,925 | INFO     | job 7040758801 has finished - writing final server update
[2026-03-10 02:22:46] 2026-03-10 01:21:54,925 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2323/.job.ad'
[2026-03-10 02:22:46] 2026-03-10 01:21:54,925 | INFO     | total number of processed events: 400 (read)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,943 | INFO     | using path: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758801/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,943 | INFO     | extracted standard info from prmon json
[2026-03-10 02:22:46] 2026-03-10 01:21:54,943 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 02:22:46] 2026-03-10 01:21:54,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 02:22:46] 2026-03-10 01:21:54,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 02:22:46] 2026-03-10 01:21:54,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 02:22:46] 2026-03-10 01:21:54,945 | INFO     | fitting pss+swap vs Time
[2026-03-10 02:22:46] 2026-03-10 01:21:54,945 | INFO     | sum of square deviations: 106336877.5
[2026-03-10 02:22:46] 2026-03-10 01:21:54,945 | INFO     | sum of deviations: 771335789.0
[2026-03-10 02:22:46] 2026-03-10 01:21:54,945 | INFO     | mean x: 1773103442.5
[2026-03-10 02:22:46] 2026-03-10 01:21:54,945 | INFO     | mean y: 2325453.9714285713
[2026-03-10 02:22:46] 2026-03-10 01:21:54,945 | INFO     | intersect: -12859234664.712267
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | chi2: 0.0003316738719824435
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | current memory leak: 7.25 B/s (using 70 data points, chi2=0.00)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | could have reported an average CPU frequency of 3608 MHz (6 samples)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | ..............................
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . Timing measurements:
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . get job = 0 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . initial setup = 4 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . payload setup = 4 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . stage-in = 0 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . payload execution = 4677 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . stage-out = 0 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | . log creation = 0 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,946 | INFO     | ..............................
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | 
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | job summary report
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | --------------------------------------------------
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | PanDA job id: 7040758801
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | task id: 48955006
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | errors: (none)
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | pilot state: finished 
[2026-03-10 02:22:46] 2026-03-10 01:21:54,998 | INFO     | transexitcode: 0
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | exeerrorcode: 0
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | exeerrordiag: 
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | exitcode: 0
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | exitmsg: OK
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | cpuconsumptiontime: 17748 s
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | nevents: 400
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | neventsw: 0
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | pid: 600428
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | pgrp: 600428
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | corecount: 4
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | event service: False
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | sizes: {0: 2279981, 1: 2280243, 11: 2280271, 4685: 2306528, 4687: 2315548, 4689: 2315604, 4691: 2315926}
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | --------------------------------------------------
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | 
[2026-03-10 02:22:46] 2026-03-10 01:21:54,999 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/2
[2026-03-10 02:22:46] 2026-03-10 01:21:55,018 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,018 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,018 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,018 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | job 7040758801 has completed (purged errors)
[2026-03-10 02:22:46] 2026-03-10 01:21:55,019 | INFO     | overall cleanup function is called
[2026-03-10 02:22:46] 2026-03-10 01:21:56,026 | INFO     | --- collectZombieJob: --- 10, [600428]
[2026-03-10 02:22:46] 2026-03-10 01:21:56,026 | INFO     | zombie collector waiting for pid 600428
[2026-03-10 02:22:46] 2026-03-10 01:21:56,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 02:22:46] 2026-03-10 01:21:56,026 | INFO     | collected zombie processes
[2026-03-10 02:22:46] 2026-03-10 01:21:56,026 | INFO     | will attempt to kill all subprocesses of pid=600428
[2026-03-10 02:22:46] 2026-03-10 01:21:56,428 | INFO     | process IDs to be killed: [600428] (in reverse order)
[2026-03-10 02:22:46] 2026-03-10 01:21:56,625 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 02:22:46] 2026-03-10 01:21:56,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 02:22:46] 2026-03-10 01:21:56,647 | INFO     | did not find any defunct processes belonging to 600428
[2026-03-10 02:22:46] 2026-03-10 01:21:56,667 | INFO     | did not find any defunct processes belonging to 600428
[2026-03-10 02:22:46] 2026-03-10 01:21:56,667 | INFO     | ready for new job
[2026-03-10 02:22:46] 2026-03-10 01:21:56,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 02:22:46] 2026-03-10 01:21:56,668 | INFO     | **************************************
[2026-03-10 02:22:46] 2026-03-10 01:21:56,671 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 02:22:46] 2026-03-10 01:21:56,671 | INFO     | **************************************
[2026-03-10 02:22:46] 2026-03-10 01:21:56,671 | INFO     | 
[2026-03-10 02:22:46] 2026-03-10 01:21:56,676 | INFO     | architecture information:
[2026-03-10 02:22:46] 2026-03-10 01:21:56,677 | INFO     | executing command: cat /etc/os-release
[2026-03-10 02:22:46] 2026-03-10 01:21:56,693 | INFO     | cat /etc/os-release:
[2026-03-10 02:22:46] NAME="CentOS Linux"
[2026-03-10 02:22:46] VERSION="7 (Core)"
[2026-03-10 02:22:46] ID="centos"
[2026-03-10 02:22:46] ID_LIKE="rhel fedora"
[2026-03-10 02:22:46] VERSION_ID="7"
[2026-03-10 02:22:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 02:22:46] ANSI_COLOR="0;31"
[2026-03-10 02:22:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 02:22:46] HOME_URL="https://www.centos.org/"
[2026-03-10 02:22:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 02:22:46] 
[2026-03-10 02:22:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 02:22:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 02:22:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 02:22:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 02:22:46] 
[2026-03-10 02:22:46] 2026-03-10 01:21:56,693 | INFO     | **************************************
[2026-03-10 02:22:46] 2026-03-10 01:21:57,196 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/2
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | INFO     | sufficient remaining disk space (20370685952 B)
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | INFO     | update_server=False
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | INFO     | aborting loop
[2026-03-10 02:22:46] 2026-03-10 01:21:57,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 02:22:46] 2026-03-10 01:21:57,876 | INFO     | all data control threads have been joined
[2026-03-10 02:22:46] 2026-03-10 01:21:58,020 | INFO     | all job control threads have been joined
[2026-03-10 02:22:46] 2026-03-10 01:21:58,076 | INFO     | all payload control threads have been joined
[2026-03-10 02:22:46] 2026-03-10 01:21:58,219 | INFO     | [job] retrieve thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,220 | INFO     | [job] job monitor thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,443 | INFO     | [payload] validate_post thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,561 | INFO     | [job] validate thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,608 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,787 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,881 | INFO     | [data] control thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,907 | INFO     | [data] copytool_in thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:58,975 | INFO     | [payload] failed_post thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:59,025 | INFO     | [job] control thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:59,081 | INFO     | [payload] control thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:59,220 | INFO     | [data] copytool_out thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:21:59,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 02:22:46] 2026-03-10 01:21:59,387 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:22:00,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:22:46] 2026-03-10 01:22:01,009 | INFO     | [job] queue monitor thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:22:03,252 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:22:07,917 | INFO     | job.realtimelogging is not enabled
[2026-03-10 02:22:46] 2026-03-10 01:22:08,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 02:22:46] 2026-03-10 01:22:27,775 | INFO     | PID=588903 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 02:22:46] 2026-03-10 01:22:27,775 | INFO     | .. there are 57 such processes running
[2026-03-10 02:22:46] 2026-03-10 01:22:27,776 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 02:22:46] 2026-03-10 01:22:27,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 02:22:46] 2026-03-10 01:22:27,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 02:22:46] 2026-03-10 01:22:40,423 | INFO     | [monitor] cgroup control has ended
[2026-03-10 02:22:46] 2026-03-10 01:22:40,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22522550511424)>', '<ExcThread(monitor, started 22522310698752)>']
[2026-03-10 02:22:46] 2026-03-10 01:22:41,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 02:22:46] 2026-03-10 01:22:41,846 | INFO     | [monitor] control thread has ended
[2026-03-10 02:22:46] 2026-03-10 01:22:45,941 | INFO     | all workflow threads have been joined
[2026-03-10 02:22:46] 2026-03-10 01:22:45,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 02:22:46] 2026-03-10 01:22:45,942 | INFO     | traces error code: 0
[2026-03-10 02:22:46] 2026-03-10 01:22:45,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 02:22:46] 2026-03-10 01:22:46,053 [wrapper] ==== pilot stdout END ====
[2026-03-10 02:22:46] 2026-03-10 01:22:46,055 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 02:22:46] 2026-03-10 01:22:46,058 [wrapper] pilotpid: 588903
[2026-03-10 02:22:46] 2026-03-10 01:22:46,060 [wrapper] Pilot exit status: 0
[2026-03-10 02:22:46] 2026-03-10 01:22:46,068 [wrapper] pandaids: 7040758801
[2026-03-10 02:22:46] 2026-03-10 01:22:46,173 [wrapper] cleanup supervisor_pilot 1432114 588904
[2026-03-10 02:22:46] 2026-03-10 01:22:46,176 [wrapper] Test setup, not cleaning
[2026-03-10 02:22:46] 2026-03-10 01:22:46,178 [wrapper] apfmon messages muted
[2026-03-10 02:22:46] 2026-03-10 01:22:46,181 [wrapper] ==== wrapper stdout END ====
[2026-03-10 02:22:46] 2026-03-10 01:22:46,183 [wrapper] ==== wrapper stderr END ====
[2026-03-10 02:22:46]  *** Error codes and diagnostics ***
[2026-03-10 02:22:46]     "exeErrorCode": 0,
[2026-03-10 02:22:46]     "exeErrorDiag": "",
[2026-03-10 02:22:46]     "pilotErrorCode": 0,
[2026-03-10 02:22:46]     "pilotErrorDiag": "",
[2026-03-10 02:22:46]  *** Listing of results directory ***
[2026-03-10 02:22:46] total 616136
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc    584627 Mar  9 08:59 pilot3.tar.gz
[2026-03-10 02:22:46] -rwx------. 1 boinc boinc     36322 Mar  9 09:03 runpilot2-wrapper.sh
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc      5111 Mar  9 09:05 queuedata.json
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc       100 Mar 10 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 02:22:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 01:03 run_atlas
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc       105 Mar 10 01:03 job.xml
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc      6704 Mar 10 01:03 init_data.xml
[2026-03-10 02:22:46] -rw-r--r--. 2 boinc boinc 439740909 Mar 10 01:03 EVNT.46701403._000680.pool.root.1
[2026-03-10 02:22:46] -rw-r--r--. 2 boinc boinc     15845 Mar 10 01:03 start_atlas.sh
[2026-03-10 02:22:46] drwxrwx--x. 2 boinc boinc      4096 Mar 10 01:03 shared
[2026-03-10 02:22:46] -rw-r--r--. 2 boinc boinc    597966 Mar 10 01:03 input.tar.gz
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc         0 Mar 10 01:03 boinc_lockfile
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc      2565 Mar 10 01:03 pandaJob.out
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc   1002738 Mar 10 01:03 agis_schedconf.cvmfs.json
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc   1511578 Mar 10 01:03 agis_ddmendpoints.agis.ALL.json
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc       444 Mar 10 01:03 workernode_map.json
[2026-03-10 02:22:46] drwx------. 5 boinc boinc      4096 Mar 10 01:03 pilot3
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc 185296479 Mar 10 02:21 HITS.48955006._033996.pool.root.1
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc       530 Mar 10 02:21 boinc_task_state.xml
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc      1044 Mar 10 02:21 memory_monitor_summary.json
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc    279883 Mar 10 02:21 log.48955006._033996.job.log.tgz.1
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc      6358 Mar 10 02:21 heartbeat.json
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc      8192 Mar 10 02:22 boinc_mmap_file
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc        27 Mar 10 02:22 wrapper_checkpoint.txt
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc        95 Mar 10 02:22 pilot_heartbeat.json
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc      4900 Mar 10 02:22 pilotlog.txt
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc    693943 Mar 10 02:22 log.48955006._033996.job.log.1
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc       357 Mar 10 02:22 output.list
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc       620 Mar 10 02:22 runtime_log
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc    993280 Mar 10 02:22 result.tar.gz
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc      9204 Mar 10 02:22 runtime_log.err
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc       662 Mar 10 02:22 b3XMDmtlkJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVFZLDmbjOPAn.diag
[2026-03-10 02:22:46] -rw-r--r--. 1 boinc boinc     21223 Mar 10 02:22 stderr.txt
[2026-03-10 02:22:46] HITS file was successfully produced:
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc 185296479 Mar 10 02:21 shared/HITS.pool.root.1
[2026-03-10 02:22:46]  *** Contents of shared directory: ***
[2026-03-10 02:22:46] total 611972
[2026-03-10 02:22:46] -rw-r--r--. 2 boinc boinc 439740909 Mar 10 01:03 ATLAS.root_0
[2026-03-10 02:22:46] -rw-r--r--. 2 boinc boinc     15845 Mar 10 01:03 start_atlas.sh
[2026-03-10 02:22:46] -rw-r--r--. 2 boinc boinc    597966 Mar 10 01:03 input.tar.gz
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc 185296479 Mar 10 02:21 HITS.pool.root.1
[2026-03-10 02:22:46] -rw-------. 1 boinc boinc    993280 Mar 10 02:22 result.tar.gz
02:22:47 (573782): run_atlas exited; CPU time 17940.750710
02:22:47 (573782): called boinc_finish(0)

</stderr_txt>
]]>

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