Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:11:36 (1328596): wrapper (7.7.26015): starting
22:11:36 (1328596): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 22:11:36] Arguments: --nthreads 4
[2026-03-09 22:11:36] Threads: 4
[2026-03-09 22:11:36] Checking for CVMFS
[2026-03-09 22:11:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 22:11:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 22:11:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 22:11:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 22:11:37] 2.9.2.0 7007 7874 101604 157089 0 50 29812730 36864001 0 130560 0 3672257 99.986 286592 9580 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-09 22:11:37] CVMFS is ok
[2026-03-09 22:11:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 22:11:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 22:11:37] Further information can be found at the LHC@home message board.
[2026-03-09 22:11:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 22:11:37] Checking for apptainer binary...
[2026-03-09 22:11:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 22:11:37] Running /usr/bin/apptainer --version
[2026-03-09 22:11:37] apptainer version 1.4.1-1.1
[2026-03-09 22:11:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 22:11:37] thA332a
[2026-03-09 22:11:37] apptainer works
[2026-03-09 22:11:37] Set ATHENA_PROC_NUMBER=4
[2026-03-09 22:11:37] Set ATHENA_CORE_NUMBER=4
[2026-03-09 22:11:37] Starting ATLAS job with PandaID=7040756015
[2026-03-09 22:11:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 23:19:17]  *** The last 200 lines of the pilot log: ***
[2026-03-09 23:19:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 23:19:17] 
[2026-03-09 23:19:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 23:19:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 23:19:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 23:19:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 23:19:17] 
[2026-03-09 23:19:17] 2026-03-09 22:18:46,227 | INFO     | **************************************
[2026-03-09 23:19:17] 2026-03-09 22:18:46,730 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-09 23:19:17] 2026-03-09 22:18:46,747 | INFO     | sufficient remaining disk space (328388837376 B)
[2026-03-09 23:19:17] 2026-03-09 22:18:46,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 23:19:17] 2026-03-09 22:18:46,747 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 23:19:17] 2026-03-09 22:18:46,747 | INFO     | update_server=False
[2026-03-09 23:19:17] 2026-03-09 22:18:46,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 23:19:17] 2026-03-09 22:18:46,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:19:17] 2026-03-09 22:18:47,019 | WARNING  | process 1337216 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 23:19:17] 2026-03-09 22:18:47,051 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 23:19:17] 2026-03-09 22:18:47,051 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 23:19:17] 2026-03-09 22:18:47,051 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-09 23:19:17] 2026-03-09 22:18:47,051 | WARNING  | maxPSS not found in memory monitor output
[2026-03-09 23:19:17] 2026-03-09 22:18:47,052 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7040756015/payload.stdout) since it has not been created yet
[2026-03-09 23:19:17] 2026-03-09 22:18:47,052 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-09 23:19:17] 2026-03-09 22:18:47,066 | INFO     | sufficient remaining disk space (328388837376 B)
[2026-03-09 23:19:17] 2026-03-09 22:18:47,066 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 23:19:17] 2026-03-09 22:18:47,066 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7040756015/HITS.48955006._033610.pool.root.1 since it does not exist
[2026-03-09 23:19:17] 2026-03-09 22:18:47,106 | INFO     | number of running child processes to parent process 1337216: 1
[2026-03-09 23:19:17] 2026-03-09 22:18:47,106 | INFO     | maximum number of monitored processes: 6
[2026-03-09 23:19:17] 2026-03-09 22:18:47,106 | INFO     | aborting job monitoring since job object (job id=7040756015) has expired
[2026-03-09 23:19:17] 2026-03-09 22:18:47,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:19:17] 2026-03-09 22:18:47,106 | INFO     | will abort loop
[2026-03-09 23:19:17] 2026-03-09 22:18:47,254 | INFO     | all data control threads have been joined
[2026-03-09 23:19:17] 2026-03-09 22:18:47,328 | INFO     | all job control threads have been joined
[2026-03-09 23:19:17] 2026-03-09 22:18:47,753 | INFO     | [job] retrieve thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:47,753 | INFO     | [job] queue monitor thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:47,941 | INFO     | [payload] validate_post thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,112 | INFO     | [job] job monitor thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,153 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,173 | INFO     | all payload control threads have been joined
[2026-03-09 23:19:17] 2026-03-09 22:18:48,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 23:19:17] 2026-03-09 22:18:48,260 | INFO     | [data] control thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,334 | INFO     | [job] control thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,588 | INFO     | [job] validate thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,673 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,766 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,832 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:48,834 | INFO     | [data] copytool_in thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:49,010 | INFO     | [payload] failed_post thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:49,179 | INFO     | [payload] control thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:49,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 23:19:17] 2026-03-09 22:18:50,196 | INFO     | [data] copytool_out thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:53,585 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 23:19:17] 2026-03-09 22:18:53,892 | INFO     | [monitor] cgroup control has ended
[2026-03-09 23:19:17] 2026-03-09 22:18:54,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137647081280)>', '<ExcThread(monitor, started 140136746555136)>']
[2026-03-09 23:19:17] 2026-03-09 22:18:59,164 | INFO     | all workflow threads have been joined
[2026-03-09 23:19:17] 2026-03-09 22:18:59,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 23:19:17] 2026-03-09 22:18:59,165 | INFO     | traces error code: 0
[2026-03-09 23:19:17] 2026-03-09 22:18:59,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 23:19:17] 2026-03-09 22:19:17,571 | INFO     | PID=1332715 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 23:19:17] 2026-03-09 22:19:17,572 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 23:19:17] 2026-03-09 22:19:17,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 23:19:17] 2026-03-09 22:19:17,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 23:19:17] 2026-03-09 22:19:17,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 23:19:17] 2026-03-09 22:19:17,572 | INFO     | [monitor] control thread has ended
[2026-03-09 23:19:17] 2026-03-09 22:19:17,646 [wrapper] ==== pilot stdout END ====
[2026-03-09 23:19:17] 2026-03-09 22:19:17,650 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 23:19:17] 2026-03-09 22:19:17,654 [wrapper] pilotpid: 1332715
[2026-03-09 23:19:17] 2026-03-09 22:19:17,658 [wrapper] Pilot exit status: 0
[2026-03-09 23:19:17] 2026-03-09 22:19:17,669 [wrapper] pandaids: 7040756015
[2026-03-09 23:19:17] 2026-03-09 22:19:17,690 [wrapper] cleanup supervisor_pilot 1342430 1332716
[2026-03-09 23:19:17] 2026-03-09 22:19:17,693 [wrapper] Test setup, not cleaning
[2026-03-09 23:19:17] 2026-03-09 22:19:17,698 [wrapper] apfmon messages muted
[2026-03-09 23:19:17] 2026-03-09 22:19:17,701 [wrapper] ==== wrapper stdout END ====
[2026-03-09 23:19:17] 2026-03-09 22:19:17,705 [wrapper] ==== wrapper stderr END ====
[2026-03-09 23:19:17]  *** Error codes and diagnostics ***
[2026-03-09 23:19:17]     "exeErrorCode": 0,
[2026-03-09 23:19:17]     "exeErrorDiag": "",
[2026-03-09 23:19:17]     "pilotErrorCode": 0,
[2026-03-09 23:19:17]     "pilotErrorDiag": "",
[2026-03-09 23:19:17]  *** Listing of results directory ***
[2026-03-09 23:19:17] total 615672
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc    584627 Mar  9 08:59 pilot3.tar.gz
[2026-03-09 23:19:17] -rwx------ 1 boinc boinc     36322 Mar  9 09:00 runpilot2-wrapper.sh
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc      5111 Mar  9 09:01 queuedata.json
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc       100 Mar  9 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 23:19:17] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 22:11 run_atlas
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc       105 Mar  9 22:11 job.xml
[2026-03-09 23:19:17] -rw-r--r-- 2 boinc boinc 434947575 Mar  9 22:11 EVNT.46701403._000672.pool.root.1
[2026-03-09 23:19:17] -rw-r--r-- 2 boinc boinc    597961 Mar  9 22:11 input.tar.gz
[2026-03-09 23:19:17] -rw-r--r-- 2 boinc boinc     15845 Mar  9 22:11 start_atlas.sh
[2026-03-09 23:19:17] drwxrwx--x 2 boinc boinc      4096 Mar  9 22:11 shared
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc         0 Mar  9 22:11 boinc_setup_complete
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc      6370 Mar  9 22:11 init_data.xml
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc         0 Mar  9 22:11 boinc_lockfile
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc      2565 Mar  9 22:11 pandaJob.out
[2026-03-09 23:19:17] -rw------- 1 boinc boinc   1002738 Mar  9 22:11 agis_schedconf.cvmfs.json
[2026-03-09 23:19:17] -rw------- 1 boinc boinc   1511578 Mar  9 22:11 agis_ddmendpoints.agis.ALL.json
[2026-03-09 23:19:17] -rw------- 1 boinc boinc       428 Mar  9 22:11 workernode_map.json
[2026-03-09 23:19:17] drwx------ 5 boinc boinc      4096 Mar  9 22:11 pilot3
[2026-03-09 23:19:17] -rw------- 1 boinc boinc 189810542 Mar  9 23:18 HITS.48955006._033610.pool.root.1
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc       530 Mar  9 23:18 boinc_task_state.xml
[2026-03-09 23:19:17] -rw------- 1 boinc boinc      1021 Mar  9 23:18 memory_monitor_summary.json
[2026-03-09 23:19:17] -rw------- 1 boinc boinc    287478 Mar  9 23:18 log.48955006._033610.job.log.tgz.1
[2026-03-09 23:19:17] -rw------- 1 boinc boinc      6316 Mar  9 23:18 heartbeat.json
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc      8192 Mar  9 23:19 boinc_mmap_file
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc        27 Mar  9 23:19 wrapper_checkpoint.txt
[2026-03-09 23:19:17] -rw------- 1 boinc boinc       747 Mar  9 23:19 pilotlog.txt
[2026-03-09 23:19:17] -rw------- 1 boinc boinc        95 Mar  9 23:19 pilot_heartbeat.json
[2026-03-09 23:19:17] -rw------- 1 boinc boinc    599687 Mar  9 23:19 log.48955006._033610.job.log.1
[2026-03-09 23:19:17] -rw------- 1 boinc boinc       357 Mar  9 23:19 output.list
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc       620 Mar  9 23:19 runtime_log
[2026-03-09 23:19:17] -rw------- 1 boinc boinc    901120 Mar  9 23:19 result.tar.gz
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc      8901 Mar  9 23:19 runtime_log.err
[2026-03-09 23:19:17] -rw------- 1 boinc boinc       658 Mar  9 23:19 fyELDmyikJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUpbLDmd1cLlm.diag
[2026-03-09 23:19:17] -rw-r--r-- 1 boinc boinc     10083 Mar  9 23:19 stderr.txt
[2026-03-09 23:19:17] HITS file was successfully produced:
[2026-03-09 23:19:17] -rw------- 1 boinc boinc 189810542 Mar  9 23:18 shared/HITS.pool.root.1
[2026-03-09 23:19:17]  *** Contents of shared directory: ***
[2026-03-09 23:19:17] total 611608
[2026-03-09 23:19:17] -rw-r--r-- 2 boinc boinc 434947575 Mar  9 22:11 ATLAS.root_0
[2026-03-09 23:19:17] -rw-r--r-- 2 boinc boinc    597961 Mar  9 22:11 input.tar.gz
[2026-03-09 23:19:17] -rw-r--r-- 2 boinc boinc     15845 Mar  9 22:11 start_atlas.sh
[2026-03-09 23:19:17] -rw------- 1 boinc boinc 189810542 Mar  9 23:18 HITS.pool.root.1
[2026-03-09 23:19:17] -rw------- 1 boinc boinc    901120 Mar  9 23:19 result.tar.gz
23:19:18 (1328596): run_atlas exited; CPU time 14900.898952
23:19:18 (1328596): called boinc_finish(0)

</stderr_txt>
]]>

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