Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:47 (1669668): wrapper (7.7.26015): starting
07:38:47 (1669668): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 07:38:47] Arguments: --nthreads 4
[2026-03-10 07:38:47] Threads: 4
[2026-03-10 07:38:47] Checking for CVMFS
[2026-03-10 07:38:47] No cvmfs_config command found, will try listing directly
[2026-03-10 07:38:47] CVMFS is ok
[2026-03-10 07:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 07:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 07:38:47] Further information can be found at the LHC@home message board.
[2026-03-10 07:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 07:38:47] Checking for apptainer binary...
[2026-03-10 07:38:47] which: no apptainer in ((null))
[2026-03-10 07:38:47] apptainer is not installed, using version from CVMFS
[2026-03-10 07:38:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 07:38:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 07:38:47] apptainer works
[2026-03-10 07:38:48] Set ATHENA_PROC_NUMBER=4
[2026-03-10 07:38:48] Set ATHENA_CORE_NUMBER=4
[2026-03-10 07:38:48] Starting ATLAS job with PandaID=7040548274
[2026-03-10 07:38:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:58:12]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:58:12]  is_tar=False
[2026-03-10 08:58:12]  lfn=log.48955006._033169.job.log.tgz.1
[2026-03-10 08:58:12]  mtime=0
[2026-03-10 08:58:12]  protocol_id=None
[2026-03-10 08:58:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 08:58:12]  replicas=None
[2026-03-10 08:58:12]  scope=mc23_13p6TeV
[2026-03-10 08:58:12]  status=None
[2026-03-10 08:58:12]  status_code=0
[2026-03-10 08:58:12]  storage_token=
[2026-03-10 08:58:12]  surl=/var/lib/boinc/var/slot72/slots/7/PanDA_Pilot-7040548274/log.48955006._033169.job.log.tgz.1
[2026-03-10 08:58:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/14/log.48955006._033169.job.log.tgz.1
[2026-03-10 08:58:12]  workdir=None
[2026-03-10 08:58:12] ]
[2026-03-10 08:58:12] 2026-03-10 07:57:09,834 | INFO     | transferring file log.48955006._033169.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/7/PanDA_Pilot-7040548274/log.48955006._033169.job.log.tgz.1 to /var/lib/b
[2026-03-10 08:58:12] 2026-03-10 07:57:09,835 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/7/PanDA_Pilot-7040548274/log.48955006._033169.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/7/lo
[2026-03-10 08:58:12] 2026-03-10 07:57:09,852 | INFO     | adding to output.list: log.48955006._033169.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/14/log.48955006._033169.job.log.tg
[2026-03-10 08:58:12] 2026-03-10 07:57:09,853 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 08:58:12] 2026-03-10 07:57:09,853 | INFO     | summary of transferred files:
[2026-03-10 08:58:12] 2026-03-10 07:57:09,853 | INFO     |  -- lfn=log.48955006._033169.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 08:58:12] 2026-03-10 07:57:09,853 | INFO     | stage-out finished correctly
[2026-03-10 08:58:12] 2026-03-10 07:57:11,337 | INFO     | time since job start (4692s) is within the limit (349056.0s)
[2026-03-10 08:58:12] 2026-03-10 07:57:11,701 | INFO     | monitor loop #341: job 0:7040548274 is in state 'finished'
[2026-03-10 08:58:12] 2026-03-10 07:57:11,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 08:58:12] 2026-03-10 07:57:12,702 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 08:58:12] 2026-03-10 07:57:13,342 | INFO     | time since job start (4694s) is within the limit (349056.0s)
[2026-03-10 08:58:12] 2026-03-10 07:57:13,342 | INFO     | 4698s have passed since pilot start - server update state is 'RUNNING'
[2026-03-10 08:58:12] 2026-03-10 07:57:14,204 | INFO     | monitor loop #342: job 0:7040548274 is in state 'finished'
[2026-03-10 08:58:12] 2026-03-10 07:57:14,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,347 | INFO     | time since job start (4696s) is within the limit (349056.0s)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,551 | INFO     | job 7040548274 has state=finished
[2026-03-10 08:58:12] 2026-03-10 07:57:15,551 | INFO     | preparing for final server update for job 7040548274 in state='finished'
[2026-03-10 08:58:12] 2026-03-10 07:57:15,551 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/7/PanDA_Pilot-7040548274/jobReport.json
[2026-03-10 08:58:12] 2026-03-10 07:57:15,553 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/7/workernode_map.json
[2026-03-10 08:58:12] 2026-03-10 07:57:15,553 | INFO     | this job has now completed (state=finished)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,553 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,553 | INFO     | log transfer has been attempted: DONE
[2026-03-10 08:58:12] 2026-03-10 07:57:15,553 | INFO     | job 7040548274 has finished - writing final server update
[2026-03-10 08:58:12] 2026-03-10 07:57:15,553 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1142352/.job.ad'
[2026-03-10 08:58:12] 2026-03-10 07:57:15,553 | INFO     | total number of processed events: 400 (read)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,571 | INFO     | using path: /var/lib/boinc/var/slot72/slots/7/PanDA_Pilot-7040548274/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,572 | INFO     | extracted standard info from prmon json
[2026-03-10 08:58:12] 2026-03-10 07:57:15,572 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 08:58:12] 2026-03-10 07:57:15,572 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 08:58:12] 2026-03-10 07:57:15,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 08:58:12] 2026-03-10 07:57:15,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 08:58:12] 2026-03-10 07:57:15,573 | INFO     | fitting pss+swap vs Time
[2026-03-10 08:58:12] 2026-03-10 07:57:15,573 | INFO     | sum of square deviations: 106336877.5
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | sum of deviations: 179475481.00000003
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | mean x: 1773127169.5
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | mean y: 2331568.1714285715
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | intersect: -2990354121.8910904
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | chi2: 0.0004324513916255946
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | current memory leak: 1.69 B/s (using 70 data points, chi2=0.00)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | could have reported an average CPU frequency of 3582 MHz (6 samples)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | ..............................
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . Timing measurements:
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . get job = 0 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . initial setup = 4 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . payload setup = 4 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . stage-in = 0 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . payload execution = 4670 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . stage-out = 0 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | . log creation = 0 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,574 | INFO     | ..............................
[2026-03-10 08:58:12] 2026-03-10 07:57:15,857 | INFO     | 
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | job summary report
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | --------------------------------------------------
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | PanDA job id: 7040548274
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | task id: 48955006
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | errors: (none)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | pilot state: finished 
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | transexitcode: 0
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | exeerrorcode: 0
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | exeerrordiag: 
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | exitcode: 0
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | exitmsg: OK
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | cpuconsumptiontime: 17681 s
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | nevents: 400
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | neventsw: 0
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | pid: 1680454
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | pgrp: 1680454
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | corecount: 4
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | event service: False
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | sizes: {0: 2280243, 10: 2280243, 4679: 2306529, 4680: 2315549, 4682: 2315605, 4685: 2315799}
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | --------------------------------------------------
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | 
[2026-03-10 08:58:12] 2026-03-10 07:57:15,858 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/7
[2026-03-10 08:58:12] 2026-03-10 07:57:15,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,874 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,874 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,874 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | job 7040548274 has completed (purged errors)
[2026-03-10 08:58:12] 2026-03-10 07:57:15,875 | INFO     | overall cleanup function is called
[2026-03-10 08:58:12] 2026-03-10 07:57:16,882 | INFO     | --- collectZombieJob: --- 10, [1680454]
[2026-03-10 08:58:12] 2026-03-10 07:57:16,882 | INFO     | zombie collector waiting for pid 1680454
[2026-03-10 08:58:12] 2026-03-10 07:57:16,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:58:12] 2026-03-10 07:57:16,882 | INFO     | collected zombie processes
[2026-03-10 08:58:12] 2026-03-10 07:57:16,882 | INFO     | will attempt to kill all subprocesses of pid=1680454
[2026-03-10 08:58:12] 2026-03-10 07:57:17,323 | INFO     | process IDs to be killed: [1680454] (in reverse order)
[2026-03-10 08:58:12] 2026-03-10 07:57:17,543 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:58:12] 2026-03-10 07:57:17,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:58:12] 2026-03-10 07:57:17,570 | INFO     | did not find any defunct processes belonging to 1680454
[2026-03-10 08:58:12] 2026-03-10 07:57:17,597 | INFO     | did not find any defunct processes belonging to 1680454
[2026-03-10 08:58:12] 2026-03-10 07:57:17,598 | INFO     | ready for new job
[2026-03-10 08:58:12] 2026-03-10 07:57:17,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:58:12] 2026-03-10 07:57:17,599 | INFO     | **************************************
[2026-03-10 08:58:12] 2026-03-10 07:57:17,599 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:58:12] 2026-03-10 07:57:17,599 | INFO     | **************************************
[2026-03-10 08:58:12] 2026-03-10 07:57:17,599 | INFO     | 
[2026-03-10 08:58:12] 2026-03-10 07:57:17,605 | INFO     | architecture information:
[2026-03-10 08:58:12] 2026-03-10 07:57:17,605 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:58:12] 2026-03-10 07:57:17,618 | INFO     | cat /etc/os-release:
[2026-03-10 08:58:12] NAME="CentOS Linux"
[2026-03-10 08:58:12] VERSION="7 (Core)"
[2026-03-10 08:58:12] ID="centos"
[2026-03-10 08:58:12] ID_LIKE="rhel fedora"
[2026-03-10 08:58:12] VERSION_ID="7"
[2026-03-10 08:58:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:58:12] ANSI_COLOR="0;31"
[2026-03-10 08:58:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:58:12] HOME_URL="https://www.centos.org/"
[2026-03-10 08:58:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:58:12] 
[2026-03-10 08:58:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:58:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:58:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:58:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:58:12] 
[2026-03-10 08:58:12] 2026-03-10 07:57:17,618 | INFO     | **************************************
[2026-03-10 08:58:12] 2026-03-10 07:57:18,121 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/7
[2026-03-10 08:58:12] 2026-03-10 07:57:18,134 | INFO     | sufficient remaining disk space (20469252096 B)
[2026-03-10 08:58:12] 2026-03-10 07:57:18,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:58:12] 2026-03-10 07:57:18,134 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:58:12] 2026-03-10 07:57:18,134 | INFO     | update_server=False
[2026-03-10 08:58:12] 2026-03-10 07:57:18,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:58:12] 2026-03-10 07:57:18,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:58:12] 2026-03-10 07:57:18,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:58:12] 2026-03-10 07:57:18,135 | INFO     | aborting loop
[2026-03-10 08:58:12] 2026-03-10 07:57:18,181 | INFO     | all payload control threads have been joined
[2026-03-10 08:58:12] 2026-03-10 07:57:18,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:58:12] 2026-03-10 07:57:19,139 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,139 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,183 | INFO     | all data control threads have been joined
[2026-03-10 08:58:12] 2026-03-10 07:57:19,187 | INFO     | [payload] control thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,298 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,333 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,493 | INFO     | all job control threads have been joined
[2026-03-10 08:58:12] 2026-03-10 07:57:19,665 | INFO     | [job] validate thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,742 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,856 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:19,942 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:20,139 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:20,188 | INFO     | [data] control thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:20,309 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:20,498 | INFO     | [job] control thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:20,569 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:20,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:58:12] 2026-03-10 07:57:21,640 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:22,761 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:58:12] 2026-03-10 07:57:48,906 | INFO     | PID=1674377 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 08:58:12] 2026-03-10 07:57:48,906 | INFO     | .. there are 59 such processes running
[2026-03-10 08:58:12] 2026-03-10 07:57:48,907 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:58:12] 2026-03-10 07:57:48,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:58:12] 2026-03-10 07:57:48,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:58:12] 2026-03-10 07:58:06,991 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:58:12] 2026-03-10 07:58:07,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23236395013952)>', '<ExcThread(monitor, started 23236147672832)>']
[2026-03-10 08:58:12] 2026-03-10 07:58:07,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:58:12] 2026-03-10 07:58:07,998 | INFO     | [monitor] control thread has ended
[2026-03-10 08:58:12] 2026-03-10 07:58:12,474 | INFO     | all workflow threads have been joined
[2026-03-10 08:58:12] 2026-03-10 07:58:12,475 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:58:12] 2026-03-10 07:58:12,475 | INFO     | traces error code: 0
[2026-03-10 08:58:12] 2026-03-10 07:58:12,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:58:12] 2026-03-10 07:58:12,636 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:58:12] 2026-03-10 07:58:12,639 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:58:12] 2026-03-10 07:58:12,641 [wrapper] pilotpid: 1674377
[2026-03-10 08:58:12] 2026-03-10 07:58:12,644 [wrapper] Pilot exit status: 0
[2026-03-10 08:58:12] 2026-03-10 07:58:12,650 [wrapper] pandaids: 7040548274
[2026-03-10 08:58:12] 2026-03-10 07:58:12,763 [wrapper] cleanup supervisor_pilot 2488672 1674378
[2026-03-10 08:58:12] 2026-03-10 07:58:12,766 [wrapper] Test setup, not cleaning
[2026-03-10 08:58:12] 2026-03-10 07:58:12,768 [wrapper] apfmon messages muted
[2026-03-10 08:58:12] 2026-03-10 07:58:12,770 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:58:12] 2026-03-10 07:58:12,772 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:58:12]  *** Error codes and diagnostics ***
[2026-03-10 08:58:12]     "exeErrorCode": 0,
[2026-03-10 08:58:12]     "exeErrorDiag": "",
[2026-03-10 08:58:12]     "pilotErrorCode": 0,
[2026-03-10 08:58:12]     "pilotErrorDiag": "",
[2026-03-10 08:58:12]  *** Listing of results directory ***
[2026-03-10 08:58:12] total 616020
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc    584627 Mar  9 08:07 pilot3.tar.gz
[2026-03-10 08:58:12] -rwx------. 1 boinc boinc     36322 Mar  9 08:07 runpilot2-wrapper.sh
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc      5111 Mar  9 08:07 queuedata.json
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc       100 Mar 10 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:58:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 07:38 run_atlas
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc       105 Mar 10 07:38 job.xml
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc      6707 Mar 10 07:38 init_data.xml
[2026-03-10 08:58:12] -rw-r--r--. 2 boinc boinc 444343399 Mar 10 07:38 EVNT.46701403._000663.pool.root.1
[2026-03-10 08:58:12] -rw-r--r--. 2 boinc boinc     15845 Mar 10 07:38 start_atlas.sh
[2026-03-10 08:58:12] drwxrwx--x. 2 boinc boinc      4096 Mar 10 07:38 shared
[2026-03-10 08:58:12] -rw-r--r--. 2 boinc boinc    597952 Mar 10 07:38 input.tar.gz
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc         0 Mar 10 07:38 boinc_lockfile
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc      2565 Mar 10 07:38 pandaJob.out
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc   1005065 Mar 10 07:38 agis_schedconf.cvmfs.json
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc   1511578 Mar 10 07:38 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc       444 Mar 10 07:38 workernode_map.json
[2026-03-10 08:58:12] drwx------. 5 boinc boinc      4096 Mar 10 07:38 pilot3
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc 180523346 Mar 10 08:56 HITS.48955006._033169.pool.root.1
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc       530 Mar 10 08:57 boinc_task_state.xml
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc      1045 Mar 10 08:57 memory_monitor_summary.json
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc    307669 Mar 10 08:57 log.48955006._033169.job.log.tgz.1
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc      6360 Mar 10 08:57 heartbeat.json
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc        95 Mar 10 08:57 pilot_heartbeat.json
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc        27 Mar 10 08:58 wrapper_checkpoint.txt
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc      8192 Mar 10 08:58 boinc_mmap_file
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc      4829 Mar 10 08:58 pilotlog.txt
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc    692112 Mar 10 08:58 log.48955006._033169.job.log.1
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc       357 Mar 10 08:58 output.list
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc       620 Mar 10 08:58 runtime_log
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc   1013760 Mar 10 08:58 result.tar.gz
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc      9204 Mar 10 08:58 runtime_log.err
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc       662 Mar 10 08:58 fzEMDmwsjJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgfbLDmuZBmim.diag
[2026-03-10 08:58:12] -rw-r--r--. 1 boinc boinc     21464 Mar 10 08:58 stderr.txt
[2026-03-10 08:58:12] HITS file was successfully produced:
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc 180523346 Mar 10 08:56 shared/HITS.pool.root.1
[2026-03-10 08:58:12]  *** Contents of shared directory: ***
[2026-03-10 08:58:12] total 611828
[2026-03-10 08:58:12] -rw-r--r--. 2 boinc boinc 444343399 Mar 10 07:38 ATLAS.root_0
[2026-03-10 08:58:12] -rw-r--r--. 2 boinc boinc     15845 Mar 10 07:38 start_atlas.sh
[2026-03-10 08:58:12] -rw-r--r--. 2 boinc boinc    597952 Mar 10 07:38 input.tar.gz
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc 180523346 Mar 10 08:56 HITS.pool.root.1
[2026-03-10 08:58:12] -rw-------. 1 boinc boinc   1013760 Mar 10 08:58 result.tar.gz
08:58:14 (1669668): run_atlas exited; CPU time 17872.933946
08:58:14 (1669668): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN