Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:51:11 (2841149): wrapper (7.7.26015): starting
03:51:11 (2841149): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 03:51:12] Arguments: --nthreads 4
[2026-03-10 03:51:12] Threads: 4
[2026-03-10 03:51:12] Checking for CVMFS
[2026-03-10 03:51:12] No cvmfs_config command found, will try listing directly
[2026-03-10 03:51:12] CVMFS is ok
[2026-03-10 03:51:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 03:51:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 03:51:12] Further information can be found at the LHC@home message board.
[2026-03-10 03:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:51:12] Checking for apptainer binary...
[2026-03-10 03:51:12] which: no apptainer in ((null))
[2026-03-10 03:51:12] apptainer is not installed, using version from CVMFS
[2026-03-10 03:51:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:51:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-10 03:51:12] apptainer works
[2026-03-10 03:51:12] Set ATHENA_PROC_NUMBER=4
[2026-03-10 03:51:12] Set ATHENA_CORE_NUMBER=4
[2026-03-10 03:51:12] Starting ATLAS job with PandaID=7046723871
[2026-03-10 03:51:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 05:26:37]  *** The last 200 lines of the pilot log: ***
[2026-03-10 05:26:37] 2026-03-10 04:25:55,718 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871/log.48966988._021373.job.log.tgz.1 /var/lib/boinc/var/slot92/slots/2/lo
[2026-03-10 05:26:37] 2026-03-10 04:25:55,733 | INFO     | adding to output.list: log.48966988._021373.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/07/log.48966988._021373.job.log.tg
[2026-03-10 05:26:37] 2026-03-10 04:25:55,734 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 05:26:37] 2026-03-10 04:25:55,734 | INFO     | summary of transferred files:
[2026-03-10 05:26:37] 2026-03-10 04:25:55,734 | INFO     |  -- lfn=log.48966988._021373.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 05:26:37] 2026-03-10 04:25:55,734 | INFO     | stage-out finished correctly
[2026-03-10 05:26:37] 2026-03-10 04:25:55,780 | INFO     | time since job start (5672s) is within the limit (349056.0s)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,452 | WARNING  | process 2871346 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 05:26:37] 2026-03-10 04:25:56,453 | INFO     | using path: /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,453 | INFO     | using path: /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,453 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 05:26:37] 2026-03-10 04:25:56,453 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 05:26:37] 2026-03-10 04:25:56,454 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2514996 B
[2026-03-10 05:26:37] 2026-03-10 04:25:56,454 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15373 B
[2026-03-10 05:26:37] 2026-03-10 04:25:56,454 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/2
[2026-03-10 05:26:37] 2026-03-10 04:25:56,466 | INFO     | sufficient remaining disk space (20624441344 B)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,466 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,467 | INFO     | size of work directory /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871: 2820528 B (within 5033164800 B limit)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,467 | INFO     | pfn file=/var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871/HITS.48966988._021373.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,467 | INFO     | total size of present files: 0 B (workdir size: 2820528 B)
[2026-03-10 05:26:37] 2026-03-10 04:25:56,467 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871/HITS.48966988._021373.pool.root.1 since it does not exist
[2026-03-10 05:26:37] 2026-03-10 04:25:56,880 | INFO     | number of running child processes to parent process 2871346: 1
[2026-03-10 05:26:37] 2026-03-10 04:25:56,880 | INFO     | maximum number of monitored processes: 6
[2026-03-10 05:26:37] 2026-03-10 04:25:56,995 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 05:26:37] 2026-03-10 04:25:57,785 | INFO     | time since job start (5674s) is within the limit (349056.0s)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,382 | INFO     | monitor loop #413: job 0:7046723871 is in state 'finished'
[2026-03-10 05:26:37] 2026-03-10 04:25:59,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,478 | INFO     | job 7046723871 has state=finished
[2026-03-10 05:26:37] 2026-03-10 04:25:59,478 | INFO     | preparing for final server update for job 7046723871 in state='finished'
[2026-03-10 05:26:37] 2026-03-10 04:25:59,478 | INFO     | reading metadata from: /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871/jobReport.json
[2026-03-10 05:26:37] 2026-03-10 04:25:59,480 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot92/slots/2/workernode_map.json
[2026-03-10 05:26:37] 2026-03-10 04:25:59,480 | INFO     | this job has now completed (state=finished)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,480 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,480 | INFO     | log transfer has been attempted: DONE
[2026-03-10 05:26:37] 2026-03-10 04:25:59,480 | INFO     | job 7046723871 has finished - writing final server update
[2026-03-10 05:26:37] 2026-03-10 04:25:59,480 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2959497/.job.ad'
[2026-03-10 05:26:37] 2026-03-10 04:25:59,480 | INFO     | total number of processed events: 400 (read)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,498 | INFO     | using path: /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7046723871/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,499 | INFO     | extracted standard info from prmon json
[2026-03-10 05:26:37] 2026-03-10 04:25:59,499 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 05:26:37] 2026-03-10 04:25:59,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 05:26:37] 2026-03-10 04:25:59,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 05:26:37] 2026-03-10 04:25:59,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 05:26:37] 2026-03-10 04:25:59,500 | INFO     | fitting pss+swap vs Time
[2026-03-10 05:26:37] 2026-03-10 04:25:59,500 | INFO     | sum of square deviations: 197203697.5
[2026-03-10 05:26:37] 2026-03-10 04:25:59,500 | INFO     | sum of deviations: 582015213.0
[2026-03-10 05:26:37] 2026-03-10 04:25:59,500 | INFO     | mean x: 1773113999.5
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | mean y: 2329340.0465116277
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | intersect: -5230733402.563953
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | chi2: 0.0003489482010179868
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | current memory leak: 2.95 B/s (using 86 data points, chi2=0.00)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | could have reported an average CPU frequency of 3632 MHz (7 samples)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | ..............................
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . Timing measurements:
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . get job = 0 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . initial setup = 4 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . payload setup = 4 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . stage-in = 0 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . payload execution = 5652 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . stage-out = 0 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | . log creation = 0 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,501 | INFO     | ..............................
[2026-03-10 05:26:37] 2026-03-10 04:25:59,547 | INFO     | 
[2026-03-10 05:26:37] 2026-03-10 04:25:59,547 | INFO     | job summary report
[2026-03-10 05:26:37] 2026-03-10 04:25:59,547 | INFO     | --------------------------------------------------
[2026-03-10 05:26:37] 2026-03-10 04:25:59,547 | INFO     | PanDA job id: 7046723871
[2026-03-10 05:26:37] 2026-03-10 04:25:59,547 | INFO     | task id: 48966988
[2026-03-10 05:26:37] 2026-03-10 04:25:59,547 | INFO     | errors: (none)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,547 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | pilot state: finished 
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | transexitcode: 0
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | exeerrorcode: 0
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | exeerrordiag: 
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | exitcode: 0
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | exitmsg: OK
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | cpuconsumptiontime: 21766 s
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | nevents: 400
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | neventsw: 0
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | pid: 2871346
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | pgrp: 2871346
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | corecount: 4
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | event service: False
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | sizes: {0: 2280282, 11: 2280282, 5660: 2306959, 5661: 2315979, 5663: 2316063, 5665: 2316257}
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | --------------------------------------------------
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | 
[2026-03-10 05:26:37] 2026-03-10 04:25:59,548 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/2
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,564 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,564 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 05:26:37] 2026-03-10 04:25:59,564 | INFO     | job 7046723871 has completed (purged errors)
[2026-03-10 05:26:37] 2026-03-10 04:25:59,564 | INFO     | overall cleanup function is called
[2026-03-10 05:26:37] 2026-03-10 04:26:00,566 | INFO     | --- collectZombieJob: --- 10, [2871346]
[2026-03-10 05:26:37] 2026-03-10 04:26:00,566 | INFO     | zombie collector waiting for pid 2871346
[2026-03-10 05:26:37] 2026-03-10 04:26:00,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 05:26:37] 2026-03-10 04:26:00,566 | INFO     | collected zombie processes
[2026-03-10 05:26:37] 2026-03-10 04:26:00,566 | INFO     | will attempt to kill all subprocesses of pid=2871346
[2026-03-10 05:26:37] 2026-03-10 04:26:00,988 | INFO     | process IDs to be killed: [2871346] (in reverse order)
[2026-03-10 05:26:37] 2026-03-10 04:26:01,204 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 05:26:37] 2026-03-10 04:26:01,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 05:26:37] 2026-03-10 04:26:01,228 | INFO     | did not find any defunct processes belonging to 2871346
[2026-03-10 05:26:37] 2026-03-10 04:26:01,252 | INFO     | did not find any defunct processes belonging to 2871346
[2026-03-10 05:26:37] 2026-03-10 04:26:01,252 | INFO     | ready for new job
[2026-03-10 05:26:37] 2026-03-10 04:26:01,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 05:26:37] 2026-03-10 04:26:01,253 | INFO     | **************************************
[2026-03-10 05:26:37] 2026-03-10 04:26:01,253 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 05:26:37] 2026-03-10 04:26:01,253 | INFO     | **************************************
[2026-03-10 05:26:37] 2026-03-10 04:26:01,253 | INFO     | 
[2026-03-10 05:26:37] 2026-03-10 04:26:01,258 | INFO     | architecture information:
[2026-03-10 05:26:37] 2026-03-10 04:26:01,259 | INFO     | executing command: cat /etc/os-release
[2026-03-10 05:26:37] 2026-03-10 04:26:01,271 | INFO     | cat /etc/os-release:
[2026-03-10 05:26:37] NAME="CentOS Linux"
[2026-03-10 05:26:37] VERSION="7 (Core)"
[2026-03-10 05:26:37] ID="centos"
[2026-03-10 05:26:37] ID_LIKE="rhel fedora"
[2026-03-10 05:26:37] VERSION_ID="7"
[2026-03-10 05:26:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 05:26:37] ANSI_COLOR="0;31"
[2026-03-10 05:26:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 05:26:37] HOME_URL="https://www.centos.org/"
[2026-03-10 05:26:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 05:26:37] 
[2026-03-10 05:26:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 05:26:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 05:26:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 05:26:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 05:26:37] 
[2026-03-10 05:26:37] 2026-03-10 04:26:01,271 | INFO     | **************************************
[2026-03-10 05:26:37] 2026-03-10 04:26:01,773 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/2
[2026-03-10 05:26:37] 2026-03-10 04:26:01,786 | INFO     | sufficient remaining disk space (20619198464 B)
[2026-03-10 05:26:37] 2026-03-10 04:26:01,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 05:26:37] 2026-03-10 04:26:01,786 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 05:26:37] 2026-03-10 04:26:01,786 | INFO     | update_server=False
[2026-03-10 05:26:37] 2026-03-10 04:26:01,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 05:26:37] 2026-03-10 04:26:01,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 05:26:37] 2026-03-10 04:26:01,887 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 05:26:37] 2026-03-10 04:26:01,887 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 05:26:37] 2026-03-10 04:26:01,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:26:37] 2026-03-10 04:26:01,887 | INFO     | will abort loop
[2026-03-10 05:26:37] 2026-03-10 04:26:02,737 | INFO     | all data control threads have been joined
[2026-03-10 05:26:37] 2026-03-10 04:26:02,791 | INFO     | [job] retrieve thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:02,892 | INFO     | [job] job monitor thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 05:26:37] 2026-03-10 04:26:03,094 | INFO     | [payload] validate_post thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,239 | INFO     | all payload control threads have been joined
[2026-03-10 05:26:37] 2026-03-10 04:26:03,340 | INFO     | [job] validate thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,383 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,413 | INFO     | all job control threads have been joined
[2026-03-10 05:26:37] 2026-03-10 04:26:03,635 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,739 | INFO     | [data] copytool_in thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,742 | INFO     | [data] control thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,742 | INFO     | [payload] failed_post thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:03,791 | INFO     | [data] copytool_out thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:04,023 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:04,244 | INFO     | [payload] control thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:04,418 | INFO     | [job] control thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:04,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:26:37] 2026-03-10 04:26:05,567 | INFO     | [job] queue monitor thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:07,058 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:12,556 | INFO     | job.realtimelogging is not enabled
[2026-03-10 05:26:37] 2026-03-10 04:26:13,564 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 05:26:37] 2026-03-10 04:26:31,333 | INFO     | PID=2855967 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 05:26:37] 2026-03-10 04:26:31,333 | INFO     | .. there are 58 such processes running
[2026-03-10 05:26:37] 2026-03-10 04:26:31,334 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 05:26:37] 2026-03-10 04:26:31,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 05:26:37] 2026-03-10 04:26:31,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 05:26:37] 2026-03-10 04:26:32,101 | INFO     | [monitor] cgroup control has ended
[2026-03-10 05:26:37] 2026-03-10 04:26:32,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22881421170496)>', '<ExcThread(monitor, started 22881102722816)>']
[2026-03-10 05:26:37] 2026-03-10 04:26:33,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 05:26:37] 2026-03-10 04:26:33,344 | INFO     | [monitor] control thread has ended
[2026-03-10 05:26:37] 2026-03-10 04:26:37,386 | INFO     | all workflow threads have been joined
[2026-03-10 05:26:37] 2026-03-10 04:26:37,386 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 05:26:37] 2026-03-10 04:26:37,386 | INFO     | traces error code: 0
[2026-03-10 05:26:37] 2026-03-10 04:26:37,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 05:26:37] 2026-03-10 04:26:37,507 [wrapper] ==== pilot stdout END ====
[2026-03-10 05:26:37] 2026-03-10 04:26:37,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 05:26:37] 2026-03-10 04:26:37,512 [wrapper] pilotpid: 2855967
[2026-03-10 05:26:37] 2026-03-10 04:26:37,514 [wrapper] Pilot exit status: 0
[2026-03-10 05:26:37] 2026-03-10 04:26:37,522 [wrapper] pandaids: 7046723871
[2026-03-10 05:26:37] 2026-03-10 04:26:37,634 [wrapper] cleanup supervisor_pilot 3816764 2855968
[2026-03-10 05:26:37] 2026-03-10 04:26:37,637 [wrapper] Test setup, not cleaning
[2026-03-10 05:26:37] 2026-03-10 04:26:37,639 [wrapper] apfmon messages muted
[2026-03-10 05:26:37] 2026-03-10 04:26:37,640 [wrapper] ==== wrapper stdout END ====
[2026-03-10 05:26:37] 2026-03-10 04:26:37,641 [wrapper] ==== wrapper stderr END ====
[2026-03-10 05:26:37]  *** Error codes and diagnostics ***
[2026-03-10 05:26:37]     "exeErrorCode": 0,
[2026-03-10 05:26:37]     "exeErrorDiag": "",
[2026-03-10 05:26:37]     "pilotErrorCode": 0,
[2026-03-10 05:26:37]     "pilotErrorDiag": "",
[2026-03-10 05:26:37]  *** Listing of results directory ***
[2026-03-10 05:26:37] total 408268
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc    584627 Mar  9 03:53 pilot3.tar.gz
[2026-03-10 05:26:37] -rwx------. 1 boinc boinc     36322 Mar  9 03:53 runpilot2-wrapper.sh
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc      5111 Mar  9 03:53 queuedata.json
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 05:26:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:51 run_atlas
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:51 job.xml
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc      6707 Mar 10 03:51 init_data.xml
[2026-03-10 05:26:37] -rw-r--r--. 2 boinc boinc 210876493 Mar 10 03:51 EVNT.48966985._000836.pool.root.1
[2026-03-10 05:26:37] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:51 start_atlas.sh
[2026-03-10 05:26:37] drwxrwx--x. 2 boinc boinc      4096 Mar 10 03:51 shared
[2026-03-10 05:26:37] -rw-r--r--. 2 boinc boinc    597975 Mar 10 03:51 input.tar.gz
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:51 boinc_lockfile
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc      2592 Mar 10 03:51 pandaJob.out
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc   1002338 Mar 10 03:51 agis_schedconf.cvmfs.json
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc   1511578 Mar 10 03:51 agis_ddmendpoints.agis.ALL.json
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc       444 Mar 10 03:51 workernode_map.json
[2026-03-10 05:26:37] drwx------. 5 boinc boinc      4096 Mar 10 03:51 pilot3
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc       529 Mar 10 05:25 boinc_task_state.xml
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc 201021982 Mar 10 05:25 HITS.48966988._021373.pool.root.1
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc      1030 Mar 10 05:25 memory_monitor_summary.json
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc    285222 Mar 10 05:25 log.48966988._021373.job.log.tgz.1
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc      6351 Mar 10 05:25 heartbeat.json
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc      8192 Mar 10 05:26 boinc_mmap_file
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc        27 Mar 10 05:26 wrapper_checkpoint.txt
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc        95 Mar 10 05:26 pilot_heartbeat.json
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc      5087 Mar 10 05:26 pilotlog.txt
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc    828869 Mar 10 05:26 log.48966988._021373.job.log.1
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc       357 Mar 10 05:26 output.list
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc       620 Mar 10 05:26 runtime_log
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc   1136640 Mar 10 05:26 result.tar.gz
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc      9204 Mar 10 05:26 runtime_log.err
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc       662 Mar 10 05:26 njHMDmKvfJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbYYLDmtUUs1n.diag
[2026-03-10 05:26:37] -rw-r--r--. 1 boinc boinc     22565 Mar 10 05:26 stderr.txt
[2026-03-10 05:26:37] HITS file was successfully produced:
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc 201021982 Mar 10 05:25 shared/HITS.pool.root.1
[2026-03-10 05:26:37]  *** Contents of shared directory: ***
[2026-03-10 05:26:37] total 403968
[2026-03-10 05:26:37] -rw-r--r--. 2 boinc boinc 210876493 Mar 10 03:51 ATLAS.root_0
[2026-03-10 05:26:37] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:51 start_atlas.sh
[2026-03-10 05:26:37] -rw-r--r--. 2 boinc boinc    597975 Mar 10 03:51 input.tar.gz
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc 201021982 Mar 10 05:25 HITS.pool.root.1
[2026-03-10 05:26:37] -rw-------. 1 boinc boinc   1136640 Mar 10 05:26 result.tar.gz
05:26:38 (2841149): run_atlas exited; CPU time 22002.180767
05:26:38 (2841149): called boinc_finish(0)

</stderr_txt>
]]>

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