Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:21 (1708): wrapper (7.7.26015): starting
15:43:21 (1708): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 15:43:21] Arguments: --nthreads 8
[2026-03-09 15:43:21] Threads: 8
[2026-03-09 15:43:21] Checking for CVMFS
[2026-03-09 15:43:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 15:43:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 15:43:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 15:43:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 15:43:26] 2.11.2.0 28330 120509 138668 157079 1 54 22216932 25165824 96 130560 157 35836926 99.812 27695295 921 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-09 15:43:26] CVMFS is ok
[2026-03-09 15:43:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 15:43:26] Checking for apptainer binary...
[2026-03-09 15:43:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 15:43:26] Running /usr/bin/apptainer --version
[2026-03-09 15:43:27] apptainer version 1.3.2-1.el7
[2026-03-09 15:43:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 15:43:32] cg-vwn377.simple-grid.lan
[2026-03-09 15:43:32] apptainer works
[2026-03-09 15:43:32] Set ATHENA_PROC_NUMBER=8
[2026-03-09 15:43:32] Set ATHENA_CORE_NUMBER=8
[2026-03-09 15:43:33] Starting ATLAS job with PandaID=7034261181
[2026-03-09 15:43:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:47:42]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:47:42] 2026-03-09 17:46:41,572 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7034261181/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,572 | INFO     | extracted standard info from prmon json
[2026-03-09 18:47:42] 2026-03-09 17:46:41,573 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 18:47:42] 2026-03-09 17:46:41,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 18:47:42] 2026-03-09 17:46:41,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 18:47:42] 2026-03-09 17:46:41,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:47:42] 2026-03-09 17:46:41,577 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:47:42] 2026-03-09 17:46:41,578 | INFO     | sum of square deviations: 1523386702.5
[2026-03-09 18:47:42] 2026-03-09 17:46:41,579 | INFO     | sum of deviations: 90632820035.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,579 | INFO     | mean x: 1773073198.5
[2026-03-09 18:47:42] 2026-03-09 17:46:41,579 | INFO     | mean y: 2348280.0235294118
[2026-03-09 18:47:42] 2026-03-09 17:46:41,580 | INFO     | intersect: -105485394159.1175
[2026-03-09 18:47:42] 2026-03-09 17:46:41,580 | INFO     | chi2: 7.896736460891848
[2026-03-09 18:47:42] 2026-03-09 17:46:41,580 | INFO     | sum of square deviations: 1392881930.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,582 | INFO     | sum of deviations: 98760984208.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,582 | INFO     | mean x: 1773073046.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,582 | INFO     | mean y: 2357467.4242424243
[2026-03-09 18:47:42] 2026-03-09 17:46:41,582 | INFO     | intersect: -125715720514.7034
[2026-03-09 18:47:42] 2026-03-09 17:46:41,582 | INFO     | chi2: 7.19610467190589
[2026-03-09 18:47:42] 2026-03-09 17:46:41,583 | INFO     | current chi2=7.19610467190589 (change=8.872422075319319 %)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,583 | INFO     | right removable region: 164
[2026-03-09 18:47:42] 2026-03-09 17:46:41,583 | INFO     | sum of square deviations: 1392881930.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,584 | INFO     | sum of deviations: 33968983380.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,585 | INFO     | mean x: 1773073351.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,585 | INFO     | mean y: 2414435.5575757576
[2026-03-09 18:47:42] 2026-03-09 17:46:41,585 | INFO     | intersect: -43238507780.75684
[2026-03-09 18:47:42] 2026-03-09 17:46:41,585 | INFO     | chi2: 2.8939981721745824
[2026-03-09 18:47:42] 2026-03-09 17:46:41,585 | INFO     | current chi2=2.8939981721745824 (change=63.35197221653593 %)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,586 | INFO     | sum of square deviations: 1270051720.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,590 | INFO     | sum of deviations: -2334658581.5
[2026-03-09 18:47:42] 2026-03-09 17:46:41,590 | INFO     | mean x: 1773073503.5
[2026-03-09 18:47:42] 2026-03-09 17:46:41,590 | INFO     | mean y: 2459292.74375
[2026-03-09 18:47:42] 2026-03-09 17:46:41,590 | INFO     | intersect: 3261792125.722037
[2026-03-09 18:47:42] 2026-03-09 17:46:41,591 | INFO     | chi2: 0.8948577919508033
[2026-03-09 18:47:42] 2026-03-09 17:46:41,591 | INFO     | current chi2=0.8948577919508033 (change=69.07884045834082 %)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,591 | INFO     | sum of square deviations: 1154663510.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,592 | INFO     | sum of deviations: -9355296781.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,593 | INFO     | mean x: 1773073656.0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,593 | INFO     | mean y: 2468495.3225806453
[2026-03-09 18:47:42] 2026-03-09 17:46:41,593 | INFO     | intersect: 14368238369.225239
[2026-03-09 18:47:42] 2026-03-09 17:46:41,593 | INFO     | chi2: 0.8025231599540542
[2026-03-09 18:47:42] 2026-03-09 17:46:41,593 | INFO     | current chi2=0.8025231599540542 (change=10.318358160066774 %)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,593 | INFO     | left removable region: 30
[2026-03-09 18:47:42] 2026-03-09 17:46:41,594 | INFO     | sum of square deviations: 746051197.5
[2026-03-09 18:47:42] 2026-03-09 17:46:41,595 | INFO     | sum of deviations: 554670559.9999996
[2026-03-09 18:47:42] 2026-03-09 17:46:41,595 | INFO     | mean x: 1773073930.5
[2026-03-09 18:47:42] 2026-03-09 17:46:41,595 | INFO     | mean y: 2483319.1641791044
[2026-03-09 18:47:42] 2026-03-09 17:46:41,595 | INFO     | intersect: -1315753168.1538851
[2026-03-09 18:47:42] 2026-03-09 17:46:41,595 | INFO     | chi2: 0.0005197758854031556
[2026-03-09 18:47:42] 2026-03-09 17:46:41,596 | INFO     | current memory leak: 0.74 B/s (using 134 data points, chi2=0.00)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,596 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,596 | INFO     | ..............................
[2026-03-09 18:47:42] 2026-03-09 17:46:41,596 | INFO     | . Timing measurements:
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | . get job = 0 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | . initial setup = 111 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | . payload setup = 143 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | . stage-in = 0 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | . payload execution = 10480 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | . stage-out = 3 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | . log creation = 1 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,597 | INFO     | ..............................
[2026-03-09 18:47:42] 2026-03-09 17:46:41,760 | INFO     | 
[2026-03-09 18:47:42] 2026-03-09 17:46:41,760 | INFO     | job summary report
[2026-03-09 18:47:42] 2026-03-09 17:46:41,760 | INFO     | --------------------------------------------------
[2026-03-09 18:47:42] 2026-03-09 17:46:41,760 | INFO     | PanDA job id: 7034261181
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | task id: 48700938
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | errors: (none)
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | pilot state: finished 
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | transexitcode: 0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | exeerrorcode: 0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | exeerrordiag: 
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | exitcode: 0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | exitmsg: OK
[2026-03-09 18:47:42] 2026-03-09 17:46:41,761 | INFO     | cpuconsumptiontime: 45034 s
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | nevents: 400
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | neventsw: 0
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | pid: 10138
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | pgrp: 10138
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | corecount: 8
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | event service: False
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | sizes: {0: 2279664, 1: 2280121, 2: 2280181, 12: 2280209, 10628: 2309244, 10633: 2318242, 10635: 2318426, 10637: 2318684}
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | --------------------------------------------------
[2026-03-09 18:47:42] 2026-03-09 17:46:41,762 | INFO     | 
[2026-03-09 18:47:42] 2026-03-09 17:46:41,763 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-09 18:47:42] 2026-03-09 17:46:42,310 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,310 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:47:42] 2026-03-09 17:46:42,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,312 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:47:42] 2026-03-09 17:46:42,313 | INFO     | job 7034261181 has completed (purged errors)
[2026-03-09 18:47:42] 2026-03-09 17:46:42,313 | INFO     | overall cleanup function is called
[2026-03-09 18:47:42] 2026-03-09 17:46:43,322 | INFO     | --- collectZombieJob: --- 10, [10138]
[2026-03-09 18:47:42] 2026-03-09 17:46:43,322 | INFO     | zombie collector waiting for pid 10138
[2026-03-09 18:47:42] 2026-03-09 17:46:43,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:47:42] 2026-03-09 17:46:43,322 | INFO     | collected zombie processes
[2026-03-09 18:47:42] 2026-03-09 17:46:43,323 | INFO     | will attempt to kill all subprocesses of pid=10138
[2026-03-09 18:47:42] 2026-03-09 17:46:43,415 | INFO     | process IDs to be killed: [10138] (in reverse order)
[2026-03-09 18:47:42] 2026-03-09 17:46:44,041 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:47:42] 2026-03-09 17:46:44,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:47:42] 2026-03-09 17:46:44,044 | INFO     | did not find any defunct processes belonging to 10138
[2026-03-09 18:47:42] 2026-03-09 17:46:44,046 | INFO     | did not find any defunct processes belonging to 10138
[2026-03-09 18:47:42] 2026-03-09 17:46:44,046 | INFO     | ready for new job
[2026-03-09 18:47:42] 2026-03-09 17:46:44,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:47:42] 2026-03-09 17:46:44,048 | INFO     | **************************************
[2026-03-09 18:47:42] 2026-03-09 17:46:44,048 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:47:42] 2026-03-09 17:46:44,048 | INFO     | **************************************
[2026-03-09 18:47:42] 2026-03-09 17:46:44,048 | INFO     | 
[2026-03-09 18:47:42] 2026-03-09 17:46:44,049 | INFO     | pilot is running in a VM
[2026-03-09 18:47:42] 2026-03-09 17:46:44,049 | INFO     | architecture information:
[2026-03-09 18:47:42] 2026-03-09 17:46:44,057 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:47:42] 2026-03-09 17:46:44,354 | INFO     | cat /etc/os-release:
[2026-03-09 18:47:42] NAME="CentOS Linux"
[2026-03-09 18:47:42] VERSION="7 (Core)"
[2026-03-09 18:47:42] ID="centos"
[2026-03-09 18:47:42] ID_LIKE="rhel fedora"
[2026-03-09 18:47:42] VERSION_ID="7"
[2026-03-09 18:47:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:47:42] ANSI_COLOR="0;31"
[2026-03-09 18:47:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:47:42] HOME_URL="https://www.centos.org/"
[2026-03-09 18:47:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:47:42] 
[2026-03-09 18:47:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:47:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:47:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:47:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:47:42] 
[2026-03-09 18:47:42] 2026-03-09 17:46:44,354 | INFO     | **************************************
[2026-03-09 18:47:42] 2026-03-09 17:46:44,857 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-09 18:47:42] 2026-03-09 17:46:45,055 | INFO     | sufficient remaining disk space (497613275136 B)
[2026-03-09 18:47:42] 2026-03-09 17:46:45,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:47:42] 2026-03-09 17:46:45,055 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:47:42] 2026-03-09 17:46:45,055 | INFO     | update_server=False
[2026-03-09 18:47:42] 2026-03-09 17:46:45,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:47:42] 2026-03-09 17:46:45,079 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 18:47:42] 2026-03-09 17:46:45,079 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 18:47:42] 2026-03-09 17:46:45,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:47:42] 2026-03-09 17:46:45,080 | INFO     | will abort loop
[2026-03-09 18:47:42] 2026-03-09 17:46:45,459 | INFO     | all data control threads have been joined
[2026-03-09 18:47:42] 2026-03-09 17:46:45,873 | INFO     | all payload control threads have been joined
[2026-03-09 18:47:42] 2026-03-09 17:46:46,061 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:46,085 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:46,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:46,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:47:42] 2026-03-09 17:46:46,285 | INFO     | [job] validate thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:46,403 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:46,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:47:42] 2026-03-09 17:46:46,423 | INFO     | all job control threads have been joined
[2026-03-09 18:47:42] 2026-03-09 17:46:46,465 | INFO     | [data] control thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:46,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:47:42] 2026-03-09 17:46:46,879 | INFO     | [payload] control thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:46,897 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:47,074 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:47,144 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:47,184 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:47,216 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:47,429 | INFO     | [job] control thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:47,781 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:48,411 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:46:50,221 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:47:42] 2026-03-09 17:47:14,377 | INFO     | PID=5703 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-09 18:47:42] 2026-03-09 17:47:14,378 | INFO     | .. there are 2 such processes running
[2026-03-09 18:47:42] 2026-03-09 17:47:14,379 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:47:42] 2026-03-09 17:47:14,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:47:42] 2026-03-09 17:47:14,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:47:42] 2026-03-09 17:47:30,187 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:47:42] 2026-03-09 17:47:31,099 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-03-09 18:47:42] 2026-03-09 17:47:32,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631791085376)>', '<ExcThread(monitor, started 140630902691584)>']
[2026-03-09 18:47:42] 2026-03-09 17:47:32,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:47:42] 2026-03-09 17:47:32,491 | INFO     | [monitor] control thread has ended
[2026-03-09 18:47:42] 2026-03-09 17:47:37,189 | INFO     | all workflow threads have been joined
[2026-03-09 18:47:42] 2026-03-09 17:47:37,189 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:47:42] 2026-03-09 17:47:37,189 | INFO     | traces error code: 0
[2026-03-09 18:47:42] 2026-03-09 17:47:37,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:47:42] 2026-03-09 17:47:37,537 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:47:42] 2026-03-09 17:47:37,670 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:47:42] 2026-03-09 17:47:37,745 [wrapper] pilotpid: 5703
[2026-03-09 18:47:42] 2026-03-09 17:47:37,876 [wrapper] Pilot exit status: 0
[2026-03-09 18:47:42] 2026-03-09 17:47:38,318 [wrapper] pandaids: 7034261181
[2026-03-09 18:47:42] 2026-03-09 17:47:39,069 [wrapper] cleanup supervisor_pilot 31046 5704
[2026-03-09 18:47:42] 2026-03-09 17:47:39,187 [wrapper] Test setup, not cleaning
[2026-03-09 18:47:42] 2026-03-09 17:47:39,333 [wrapper] apfmon messages muted
[2026-03-09 18:47:42] 2026-03-09 17:47:39,450 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:47:42] 2026-03-09 17:47:39,544 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:47:42]  *** Error codes and diagnostics ***
[2026-03-09 18:47:42]     "exeErrorCode": 0,
[2026-03-09 18:47:42]     "exeErrorDiag": "",
[2026-03-09 18:47:42]     "pilotErrorCode": 0,
[2026-03-09 18:47:42]     "pilotErrorDiag": "",
[2026-03-09 18:47:42]  *** Listing of results directory ***
[2026-03-09 18:47:42] total 337192
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc    584627 Mar  1 03:30 pilot3.tar.gz
[2026-03-09 18:47:42] -rwx------. 1 boinc boinc     36322 Mar  1 03:32 runpilot2-wrapper.sh
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc      5111 Mar  1 03:33 queuedata.json
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc       100 Mar  9 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:47:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 15:43 run_atlas
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc       105 Mar  9 15:43 job.xml
[2026-03-09 18:47:42] -rw-r--r--. 2 boinc boinc 189577441 Mar  9 15:43 EVNT.48700936._000066.pool.root.1
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc      6391 Mar  9 15:43 init_data.xml
[2026-03-09 18:47:42] -rw-r--r--. 2 boinc boinc     15845 Mar  9 15:43 start_atlas.sh
[2026-03-09 18:47:42] drwxrwx--x. 2 boinc boinc        68 Mar  9 15:43 shared
[2026-03-09 18:47:42] -rw-r--r--. 2 boinc boinc    597932 Mar  9 15:43 input.tar.gz
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc         0 Mar  9 15:43 boinc_lockfile
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc      2499 Mar  9 15:43 pandaJob.out
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc   1511578 Mar  9 15:47 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc       415 Mar  9 15:49 workernode_map.json
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc    990760 Mar  9 15:49 agis_schedconf.cvmfs.json
[2026-03-09 18:47:42] drwx------. 5 boinc boinc      4096 Mar  9 15:49 pilot3
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc 147946447 Mar  9 18:45 HITS.48700938._001321.pool.root.1
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc       531 Mar  9 18:45 boinc_task_state.xml
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc      1020 Mar  9 18:46 memory_monitor_summary.json
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc    421739 Mar  9 18:46 log.48700938._001321.job.log.tgz.1
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc      6324 Mar  9 18:46 heartbeat.json
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc        95 Mar  9 18:47 pilot_heartbeat.json
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc      8192 Mar  9 18:47 boinc_mmap_file
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc        28 Mar  9 18:47 wrapper_checkpoint.txt
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc      5065 Mar  9 18:47 pilotlog.txt
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc   1508055 Mar  9 18:47 log.48700938._001321.job.log.1
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc       357 Mar  9 18:47 output.list
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc       620 Mar  9 18:47 runtime_log
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc   1945600 Mar  9 18:47 result.tar.gz
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc       655 Mar  9 18:47 v6CLDmPmlG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBu6KDmwEJUUn.diag
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc      8816 Mar  9 18:47 runtime_log.err
[2026-03-09 18:47:42] -rw-r--r--. 1 boinc boinc     20696 Mar  9 18:47 stderr.txt
[2026-03-09 18:47:42] HITS file was successfully produced:
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc 147946447 Mar  9 18:45 shared/HITS.pool.root.1
[2026-03-09 18:47:42]  *** Contents of shared directory: ***
[2026-03-09 18:47:42] total 332116
[2026-03-09 18:47:42] -rw-r--r--. 2 boinc boinc 189577441 Mar  9 15:43 ATLAS.root_0
[2026-03-09 18:47:42] -rw-r--r--. 2 boinc boinc     15845 Mar  9 15:43 start_atlas.sh
[2026-03-09 18:47:42] -rw-r--r--. 2 boinc boinc    597932 Mar  9 15:43 input.tar.gz
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc 147946447 Mar  9 18:45 HITS.pool.root.1
[2026-03-09 18:47:42] -rw-------. 1 boinc boinc   1945600 Mar  9 18:47 result.tar.gz
18:47:43 (1708): run_atlas exited; CPU time 45143.224191
18:47:43 (1708): called boinc_finish(0)

</stderr_txt>
]]>

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