Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:40:45 (1898438): wrapper (7.7.26015): starting
15:40:45 (1898438): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 15:40:45] Arguments: --nthreads 4
[2026-03-10 15:40:45] Threads: 4
[2026-03-10 15:40:45] Checking for CVMFS
[2026-03-10 15:40:45] No cvmfs_config command found, will try listing directly
[2026-03-10 15:40:45] CVMFS is ok
[2026-03-10 15:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 15:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 15:40:45] Further information can be found at the LHC@home message board.
[2026-03-10 15:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 15:40:45] Checking for apptainer binary...
[2026-03-10 15:40:45] which: no apptainer in ((null))
[2026-03-10 15:40:45] apptainer is not installed, using version from CVMFS
[2026-03-10 15:40:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 15:40:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-10 15:40:45] apptainer works
[2026-03-10 15:40:45] Set ATHENA_PROC_NUMBER=4
[2026-03-10 15:40:45] Set ATHENA_CORE_NUMBER=4
[2026-03-10 15:40:45] Starting ATLAS job with PandaID=7040546279
[2026-03-10 15:40:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 17:22:22]  *** The last 200 lines of the pilot log: ***
[2026-03-10 17:22:22]  is_altstaged=None
[2026-03-10 17:22:22]  is_tar=False
[2026-03-10 17:22:22]  lfn=log.48955010._016337.job.log.tgz.1
[2026-03-10 17:22:22]  mtime=0
[2026-03-10 17:22:22]  protocol_id=None
[2026-03-10 17:22:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 17:22:22]  replicas=None
[2026-03-10 17:22:22]  scope=mc23_13p6TeV
[2026-03-10 17:22:22]  status=None
[2026-03-10 17:22:22]  status_code=0
[2026-03-10 17:22:22]  storage_token=
[2026-03-10 17:22:22]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7040546279/log.48955010._016337.job.log.tgz.1
[2026-03-10 17:22:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/88/log.48955010._016337.job.log.tgz.1
[2026-03-10 17:22:22]  workdir=None
[2026-03-10 17:22:22] ]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,042 | INFO     | transferring file log.48955010._016337.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7040546279/log.48955010._016337.job.log.tgz.1 to /var/lib/
[2026-03-10 17:22:22] 2026-03-10 15:55:18,043 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7040546279/log.48955010._016337.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-10 17:22:22] 2026-03-10 15:55:18,056 | INFO     | adding to output.list: log.48955010._016337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/88/log.48955010._016337.job.log.tg
[2026-03-10 17:22:22] 2026-03-10 15:55:18,056 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 17:22:22] 2026-03-10 15:55:18,056 | INFO     | summary of transferred files:
[2026-03-10 17:22:22] 2026-03-10 15:55:18,056 | INFO     |  -- lfn=log.48955010._016337.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 17:22:22] 2026-03-10 15:55:18,057 | INFO     | stage-out finished correctly
[2026-03-10 17:22:22] 2026-03-10 15:55:18,089 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 17:22:22] 2026-03-10 15:55:18,136 | INFO     | job 7040546279 has state=finished
[2026-03-10 17:22:22] 2026-03-10 15:55:18,136 | INFO     | preparing for final server update for job 7040546279 in state='finished'
[2026-03-10 17:22:22] 2026-03-10 15:55:18,136 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7040546279/jobReport.json
[2026-03-10 17:22:22] 2026-03-10 15:55:18,137 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-10 17:22:22] 2026-03-10 15:55:18,138 | INFO     | this job has now completed (state=finished)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,138 | INFO     | log transfer has been attempted: DONE
[2026-03-10 17:22:22] 2026-03-10 15:55:18,138 | INFO     | job 7040546279 has finished - writing final server update
[2026-03-10 17:22:22] 2026-03-10 15:55:18,138 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1511283/.job.ad'
[2026-03-10 17:22:22] 2026-03-10 15:55:18,138 | INFO     | total number of processed events: 400 (read)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,150 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7040546279/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,150 | INFO     | extracted standard info from prmon json
[2026-03-10 17:22:22] 2026-03-10 15:55:18,150 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 17:22:22] 2026-03-10 15:55:18,150 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 17:22:22] 2026-03-10 15:55:18,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 17:22:22] 2026-03-10 15:55:18,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 17:22:22] 2026-03-10 15:55:18,151 | INFO     | fitting pss+swap vs Time
[2026-03-10 17:22:22] 2026-03-10 15:55:18,151 | INFO     | sum of square deviations: 89127252.5
[2026-03-10 17:22:22] 2026-03-10 15:55:18,151 | INFO     | sum of deviations: 335951278.00000006
[2026-03-10 17:22:22] 2026-03-10 15:55:18,151 | INFO     | mean x: 1773155968.5
[2026-03-10 17:22:22] 2026-03-10 15:55:18,151 | INFO     | mean y: 2329066.393939394
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | intersect: -6681305815.214274
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | chi2: 0.00020715691712586143
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | current memory leak: 3.77 B/s (using 66 data points, chi2=0.00)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | could have reported an average CPU frequency of 3651 MHz (6 samples)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | ..............................
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . Timing measurements:
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . get job = 0 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . initial setup = 5 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . payload setup = 5 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . stage-in = 0 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . payload execution = 4437 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . stage-out = 0 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | . log creation = 0 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,152 | INFO     | ..............................
[2026-03-10 17:22:22] 2026-03-10 15:55:18,186 | INFO     | 
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | job summary report
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | --------------------------------------------------
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | PanDA job id: 7040546279
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | task id: 48955010
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | errors: (none)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | pilot state: finished 
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | transexitcode: 0
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | exeerrorcode: 0
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | exeerrordiag: 
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | exitcode: 0
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | exitmsg: OK
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | cpuconsumptiontime: 16986 s
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | nevents: 400
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | neventsw: 0
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | pid: 1986817
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | pgrp: 1986817
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | corecount: 4
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | event service: False
[2026-03-10 17:22:22] 2026-03-10 15:55:18,187 | INFO     | sizes: {0: 2279087, 1: 2280217, 11: 2280217, 4446: 2306390, 4448: 2315606}
[2026-03-10 17:22:22] 2026-03-10 15:55:18,188 | INFO     | --------------------------------------------------
[2026-03-10 17:22:22] 2026-03-10 15:55:18,188 | INFO     | 
[2026-03-10 17:22:22] 2026-03-10 15:55:18,188 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-10 17:22:22] 2026-03-10 15:55:18,204 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | job 7040546279 has completed (purged errors)
[2026-03-10 17:22:22] 2026-03-10 15:55:18,205 | INFO     | overall cleanup function is called
[2026-03-10 17:22:22] 2026-03-10 15:55:19,212 | INFO     | --- collectZombieJob: --- 10, [1986817]
[2026-03-10 17:22:22] 2026-03-10 15:55:19,212 | INFO     | zombie collector waiting for pid 1986817
[2026-03-10 17:22:22] 2026-03-10 15:55:19,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 17:22:22] 2026-03-10 15:55:19,212 | INFO     | collected zombie processes
[2026-03-10 17:22:22] 2026-03-10 15:55:19,212 | INFO     | will attempt to kill all subprocesses of pid=1986817
[2026-03-10 17:22:22] 2026-03-10 15:55:19,605 | INFO     | process IDs to be killed: [1986817] (in reverse order)
[2026-03-10 17:22:22] 2026-03-10 15:55:19,797 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 17:22:22] 2026-03-10 15:55:19,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 17:22:22] 2026-03-10 15:55:19,825 | INFO     | did not find any defunct processes belonging to 1986817
[2026-03-10 17:22:22] 2026-03-10 15:55:19,854 | INFO     | did not find any defunct processes belonging to 1986817
[2026-03-10 17:22:22] 2026-03-10 15:55:19,854 | INFO     | ready for new job
[2026-03-10 17:22:22] 2026-03-10 15:55:19,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 17:22:22] 2026-03-10 15:55:19,855 | INFO     | **************************************
[2026-03-10 17:22:22] 2026-03-10 15:55:19,855 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 17:22:22] 2026-03-10 15:55:19,855 | INFO     | **************************************
[2026-03-10 17:22:22] 2026-03-10 15:55:19,855 | INFO     | 
[2026-03-10 17:22:22] 2026-03-10 15:55:19,860 | INFO     | architecture information:
[2026-03-10 17:22:22] 2026-03-10 15:55:19,861 | INFO     | executing command: cat /etc/os-release
[2026-03-10 17:22:22] 2026-03-10 15:55:19,872 | INFO     | cat /etc/os-release:
[2026-03-10 17:22:22] NAME="CentOS Linux"
[2026-03-10 17:22:22] VERSION="7 (Core)"
[2026-03-10 17:22:22] ID="centos"
[2026-03-10 17:22:22] ID_LIKE="rhel fedora"
[2026-03-10 17:22:22] VERSION_ID="7"
[2026-03-10 17:22:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 17:22:22] ANSI_COLOR="0;31"
[2026-03-10 17:22:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 17:22:22] HOME_URL="https://www.centos.org/"
[2026-03-10 17:22:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 17:22:22] 
[2026-03-10 17:22:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 17:22:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 17:22:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 17:22:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 17:22:22] 
[2026-03-10 17:22:22] 2026-03-10 15:55:19,872 | INFO     | **************************************
[2026-03-10 17:22:22] 2026-03-10 15:55:20,374 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-10 17:22:22] 2026-03-10 15:55:20,385 | INFO     | sufficient remaining disk space (19770900480 B)
[2026-03-10 17:22:22] 2026-03-10 15:55:20,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 17:22:22] 2026-03-10 15:55:20,385 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 17:22:22] 2026-03-10 15:55:20,385 | INFO     | update_server=False
[2026-03-10 17:22:22] 2026-03-10 15:55:20,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 17:22:22] 2026-03-10 15:55:20,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 17:22:22] 2026-03-10 15:55:20,449 | INFO     | all job control threads have been joined
[2026-03-10 17:22:22] 2026-03-10 15:55:20,851 | INFO     | all data control threads have been joined
[2026-03-10 17:22:22] 2026-03-10 15:55:21,038 | INFO     | all payload control threads have been joined
[2026-03-10 17:22:22] 2026-03-10 15:55:21,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 17:22:22] 2026-03-10 15:55:21,390 | INFO     | [job] retrieve thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:21,396 | WARNING  | process 1986817 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 17:22:22] 2026-03-10 15:55:21,454 | INFO     | [job] control thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:21,495 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:21,505 | INFO     | [data] copytool_in thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:21,696 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:21,704 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:22:22] 2026-03-10 15:55:21,856 | INFO     | [data] control thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:22,043 | INFO     | [payload] control thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:22,044 | INFO     | [payload] validate_post thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:22,129 | INFO     | number of running child processes to parent process 1986817: 1
[2026-03-10 17:22:22] 2026-03-10 15:55:22,129 | INFO     | maximum number of monitored processes: 6
[2026-03-10 17:22:22] 2026-03-10 15:55:22,130 | INFO     | aborting job monitoring since job object (job id=7040546279) has expired
[2026-03-10 17:22:22] 2026-03-10 15:55:22,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:22:22] 2026-03-10 15:55:22,130 | INFO     | will abort loop
[2026-03-10 17:22:22] 2026-03-10 15:55:22,251 | INFO     | [job] validate thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:22,473 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:22,572 | INFO     | [payload] failed_post thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:22,664 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:23,098 | INFO     | [data] copytool_out thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:23,134 | INFO     | [job] job monitor thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:23,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:22:22] 2026-03-10 15:55:24,198 | INFO     | [job] queue monitor thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:24,391 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 17:22:22] 2026-03-10 15:55:49,453 | INFO     | 4465s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-10 17:22:22] 2026-03-10 15:55:50,924 | INFO     | PID=1925738 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 17:22:22] 2026-03-10 15:55:50,925 | INFO     | .. there are 45 such processes running
[2026-03-10 17:22:22] 2026-03-10 15:55:50,925 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 17:22:22] 2026-03-10 15:55:50,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 17:22:22] 2026-03-10 15:55:50,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 17:22:22] 2026-03-10 15:55:53,294 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-10 17:22:22] 2026-03-10 15:56:06,573 | INFO     | [monitor] cgroup control has ended
[2026-03-10 17:22:22] 2026-03-10 15:56:07,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22736638523200)>', '<ExcThread(monitor, started 22736398460672)>']
[2026-03-10 17:22:22] 2026-03-10 15:56:07,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 17:22:22] 2026-03-10 15:56:07,990 | INFO     | [monitor] control thread has ended
[2026-03-10 17:22:22] 2026-03-10 15:56:12,394 | INFO     | all workflow threads have been joined
[2026-03-10 17:22:22] 2026-03-10 15:56:12,395 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 17:22:22] 2026-03-10 15:56:12,395 | INFO     | traces error code: 0
[2026-03-10 17:22:22] 2026-03-10 15:56:12,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 17:22:22] 2026-03-10 15:56:12,619 [wrapper] ==== pilot stdout END ====
[2026-03-10 17:22:22] 2026-03-10 15:56:12,621 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 17:22:22] 2026-03-10 15:56:12,623 [wrapper] pilotpid: 1925738
[2026-03-10 17:22:22] 2026-03-10 15:56:12,624 [wrapper] Pilot exit status: 0
[2026-03-10 17:22:22] 2026-03-10 15:56:12,630 [wrapper] pandaids: 7040546279
[2026-03-10 17:22:22] 2026-03-10 15:56:12,761 [wrapper] cleanup supervisor_pilot 2652402 1925740
[2026-03-10 17:22:22] 2026-03-10 15:56:12,763 [wrapper] Test setup, not cleaning
[2026-03-10 17:22:22] 2026-03-10 15:56:12,765 [wrapper] apfmon messages muted
[2026-03-10 17:22:22] 2026-03-10 15:56:12,767 [wrapper] ==== wrapper stdout END ====
[2026-03-10 17:22:22] 2026-03-10 15:56:12,770 [wrapper] ==== wrapper stderr END ====
[2026-03-10 17:22:22]  *** Error codes and diagnostics ***
[2026-03-10 17:22:22]     "exeErrorCode": 0,
[2026-03-10 17:22:22]     "exeErrorDiag": "",
[2026-03-10 17:22:22]     "pilotErrorCode": 0,
[2026-03-10 17:22:22]     "pilotErrorDiag": "",
[2026-03-10 17:22:22]  *** Listing of results directory ***
[2026-03-10 17:22:22] total 614244
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc    584627 Mar  9 06:55 pilot3.tar.gz
[2026-03-10 17:22:22] -rwx------. 1 boinc boinc     36322 Mar  9 06:57 runpilot2-wrapper.sh
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc      5111 Mar  9 06:58 queuedata.json
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc       100 Mar 10 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 17:22:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 15:40 run_atlas
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc       105 Mar 10 15:40 job.xml
[2026-03-10 17:22:22] -rw-r--r--. 2 boinc boinc 442795870 Mar 10 15:40 EVNT.46701403._001327.pool.root.1
[2026-03-10 17:22:22] -rw-r--r--. 2 boinc boinc     15845 Mar 10 15:40 start_atlas.sh
[2026-03-10 17:22:22] drwxrwx--x. 2 boinc boinc      4096 Mar 10 15:40 shared
[2026-03-10 17:22:22] -rw-r--r--. 2 boinc boinc    597956 Mar 10 15:40 input.tar.gz
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc      6709 Mar 10 15:40 init_data.xml
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc         0 Mar 10 15:40 boinc_lockfile
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc      2562 Mar 10 15:40 pandaJob.out
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc   1006737 Mar 10 15:40 agis_schedconf.cvmfs.json
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc   1511578 Mar 10 15:40 agis_ddmendpoints.agis.ALL.json
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc       444 Mar 10 15:40 workernode_map.json
[2026-03-10 17:22:22] drwx------. 5 boinc boinc      4096 Mar 10 15:40 pilot3
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc 180420720 Mar 10 16:54 HITS.48955010._016337.pool.root.1
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc       528 Mar 10 16:55 boinc_task_state.xml
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc      1026 Mar 10 16:55 memory_monitor_summary.json
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc    256077 Mar 10 16:55 log.48955010._016337.job.log.tgz.1
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc      6350 Mar 10 16:55 heartbeat.json
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc        95 Mar 10 16:55 pilot_heartbeat.json
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc      5478 Mar 10 16:56 pilotlog.txt
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc    658486 Mar 10 16:56 log.48955010._016337.job.log.1
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc       357 Mar 10 16:56 output.list
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc       620 Mar 10 16:56 runtime_log
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc    931840 Mar 10 16:56 result.tar.gz
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc      9221 Mar 10 16:56 runtime_log.err
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc       662 Mar 10 16:56 idYMDmTniJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzzYLDmkP5Jdn.diag
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc        26 Mar 10 17:22 wrapper_checkpoint.txt
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc      8192 Mar 10 17:22 boinc_mmap_file
[2026-03-10 17:22:22] -rw-r--r--. 1 boinc boinc     21369 Mar 10 17:22 stderr.txt
[2026-03-10 17:22:22] HITS file was successfully produced:
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc 180420720 Mar 10 16:54 shared/HITS.pool.root.1
[2026-03-10 17:22:22]  *** Contents of shared directory: ***
[2026-03-10 17:22:22] total 610136
[2026-03-10 17:22:22] -rw-r--r--. 2 boinc boinc 442795870 Mar 10 15:40 ATLAS.root_0
[2026-03-10 17:22:22] -rw-r--r--. 2 boinc boinc     15845 Mar 10 15:40 start_atlas.sh
[2026-03-10 17:22:22] -rw-r--r--. 2 boinc boinc    597956 Mar 10 15:40 input.tar.gz
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc 180420720 Mar 10 16:54 HITS.pool.root.1
[2026-03-10 17:22:22] -rw-------. 1 boinc boinc    931840 Mar 10 16:56 result.tar.gz
17:22:23 (1898438): run_atlas exited; CPU time 17198.971552
17:22:23 (1898438): called boinc_finish(0)

</stderr_txt>
]]>

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