Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:59:26 (2480323): wrapper (7.7.26015): starting
16:59:26 (2480323): wrapper: running run_atlas (--nthreads 3)
[2026-03-09 16:59:26] Arguments: --nthreads 3
[2026-03-09 16:59:26] Threads: 3
[2026-03-09 16:59:26] Checking for CVMFS
[2026-03-09 16:59:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 16:59:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 16:59:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 16:59:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 16:59:27] 2.9.2.0 18499 17300 89324 157081 2 50 26480089 36864001 0 130560 0 6916866 99.983 644070 6699 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-09 16:59:27] CVMFS is ok
[2026-03-09 16:59:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:59:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:59:27] Further information can be found at the LHC@home message board.
[2026-03-09 16:59:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:59:27] Checking for apptainer binary...
[2026-03-09 16:59:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 16:59:27] Running /usr/bin/apptainer --version
[2026-03-09 16:59:27] apptainer version 1.4.1-1.1
[2026-03-09 16:59:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:59:27] legendA257a
[2026-03-09 16:59:27] apptainer works
[2026-03-09 16:59:27] Set ATHENA_PROC_NUMBER=3
[2026-03-09 16:59:27] Set ATHENA_CORE_NUMBER=3
[2026-03-09 16:59:27] Starting ATLAS job with PandaID=7040360004
[2026-03-09 16:59:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:34:07]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:34:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:34:07] 
[2026-03-09 18:34:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:34:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:34:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:34:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:34:07] 
[2026-03-09 18:34:07] 2026-03-09 17:33:36,829 | INFO     | **************************************
[2026-03-09 18:34:07] 2026-03-09 17:33:37,332 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-09 18:34:07] 2026-03-09 17:33:37,346 | INFO     | sufficient remaining disk space (376948391936 B)
[2026-03-09 18:34:07] 2026-03-09 17:33:37,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:34:07] 2026-03-09 17:33:37,346 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:34:07] 2026-03-09 17:33:37,346 | INFO     | update_server=False
[2026-03-09 18:34:07] 2026-03-09 17:33:37,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:34:07] 2026-03-09 17:33:37,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:34:07] 2026-03-09 17:33:37,592 | INFO     | all data control threads have been joined
[2026-03-09 18:34:07] 2026-03-09 17:33:37,894 | INFO     | all payload control threads have been joined
[2026-03-09 18:34:07] 2026-03-09 17:33:38,352 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,352 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,367 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,367 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,386 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,499 | INFO     | all job control threads have been joined
[2026-03-09 18:34:07] 2026-03-09 17:33:38,547 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,598 | INFO     | [data] control thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,717 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:38,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:34:07] 2026-03-09 17:33:38,900 | INFO     | [payload] control thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:39,134 | WARNING  | process 2488790 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 18:34:07] 2026-03-09 17:33:39,161 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:34:07] 2026-03-09 17:33:39,195 | INFO     | number of running child processes to parent process 2488790: 1
[2026-03-09 18:34:07] 2026-03-09 17:33:39,195 | INFO     | maximum number of monitored processes: 6
[2026-03-09 18:34:07] 2026-03-09 17:33:39,195 | INFO     | aborting job monitoring since job object (job id=7040360004) has expired
[2026-03-09 18:34:07] 2026-03-09 17:33:39,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:34:07] 2026-03-09 17:33:39,195 | INFO     | will abort loop
[2026-03-09 18:34:07] 2026-03-09 17:33:39,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:34:07] 2026-03-09 17:33:39,505 | INFO     | [job] control thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:39,735 | INFO     | [job] validate thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:39,793 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:40,201 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:40,728 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:43,249 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:43,947 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:34:07] 2026-03-09 17:33:47,469 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:34:07] 2026-03-09 17:33:48,474 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:34:07] 2026-03-09 17:33:50,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029807138624)>', '<ExcThread(monitor, started 140028852287232)>']
[2026-03-09 18:34:07] 2026-03-09 17:33:55,611 | INFO     | all workflow threads have been joined
[2026-03-09 18:34:07] 2026-03-09 17:33:55,611 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:34:07] 2026-03-09 17:33:55,612 | INFO     | traces error code: 0
[2026-03-09 18:34:07] 2026-03-09 17:33:55,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:34:07] 2026-03-09 17:34:07,549 | INFO     | PID=2484360 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 18:34:07] 2026-03-09 17:34:07,549 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:34:07] 2026-03-09 17:34:07,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:34:07] 2026-03-09 17:34:07,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:34:07] 2026-03-09 17:34:07,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:34:07] 2026-03-09 17:34:07,549 | CRITICAL | thread 'MainThread' is not alive
[2026-03-09 18:34:07] 2026-03-09 17:34:07,549 | INFO     | [monitor] control thread has ended
[2026-03-09 18:34:07] 2026-03-09 17:34:07,596 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:34:07] 2026-03-09 17:34:07,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:34:07] 2026-03-09 17:34:07,602 [wrapper] pilotpid: 2484360
[2026-03-09 18:34:07] 2026-03-09 17:34:07,604 [wrapper] Pilot exit status: 0
[2026-03-09 18:34:07] 2026-03-09 17:34:07,612 [wrapper] pandaids: 7040360004
[2026-03-09 18:34:07] 2026-03-09 17:34:07,629 [wrapper] cleanup supervisor_pilot 2494213 2484361
[2026-03-09 18:34:07] 2026-03-09 17:34:07,632 [wrapper] Test setup, not cleaning
[2026-03-09 18:34:07] 2026-03-09 17:34:07,634 [wrapper] apfmon messages muted
[2026-03-09 18:34:07] 2026-03-09 17:34:07,636 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:34:07] 2026-03-09 17:34:07,639 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:34:07]  *** Error codes and diagnostics ***
[2026-03-09 18:34:07]     "exeErrorCode": 0,
[2026-03-09 18:34:07]     "exeErrorDiag": "",
[2026-03-09 18:34:07]     "pilotErrorCode": 0,
[2026-03-09 18:34:07]     "pilotErrorDiag": "",
[2026-03-09 18:34:07]  *** Listing of results directory ***
[2026-03-09 18:34:07] total 499708
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc      5111 Mar  4 18:22 queuedata.json
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc    584627 Mar  4 18:22 pilot3.tar.gz
[2026-03-09 18:34:07] -rwx------ 1 boinc boinc     36322 Mar  4 18:22 runpilot2-wrapper.sh
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc       100 Mar  9 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:34:07] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 16:59 run_atlas
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc       105 Mar  9 16:59 job.xml
[2026-03-09 18:34:07] -rw-r--r-- 2 boinc boinc 294485646 Mar  9 16:59 EVNT.48716896._000045.pool.root.1
[2026-03-09 18:34:07] -rw-r--r-- 2 boinc boinc    597962 Mar  9 16:59 input.tar.gz
[2026-03-09 18:34:07] -rw-r--r-- 2 boinc boinc     15845 Mar  9 16:59 start_atlas.sh
[2026-03-09 18:34:07] drwxrwx--x 2 boinc boinc      4096 Mar  9 16:59 shared
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc         0 Mar  9 16:59 boinc_setup_complete
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc      6449 Mar  9 16:59 init_data.xml
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc         0 Mar  9 16:59 boinc_lockfile
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc      2597 Mar  9 16:59 pandaJob.out
[2026-03-09 18:34:07] -rw------- 1 boinc boinc   1002554 Mar  9 16:59 agis_schedconf.cvmfs.json
[2026-03-09 18:34:07] -rw------- 1 boinc boinc   1511578 Mar  9 16:59 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:34:07] -rw------- 1 boinc boinc       428 Mar  9 16:59 workernode_map.json
[2026-03-09 18:34:07] drwx------ 5 boinc boinc      4096 Mar  9 16:59 pilot3
[2026-03-09 18:34:07] -rw------- 1 boinc boinc 211124946 Mar  9 18:33 HITS.48973281._001118.pool.root.1
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc       529 Mar  9 18:33 boinc_task_state.xml
[2026-03-09 18:34:07] -rw------- 1 boinc boinc      1016 Mar  9 18:33 memory_monitor_summary.json
[2026-03-09 18:34:07] -rw------- 1 boinc boinc    268652 Mar  9 18:33 log.48973281._001118.job.log.tgz.1
[2026-03-09 18:34:07] -rw------- 1 boinc boinc      6303 Mar  9 18:33 heartbeat.json
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc      8192 Mar  9 18:34 boinc_mmap_file
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc        27 Mar  9 18:34 wrapper_checkpoint.txt
[2026-03-09 18:34:07] -rw------- 1 boinc boinc       817 Mar  9 18:34 pilotlog.txt
[2026-03-09 18:34:07] -rw------- 1 boinc boinc        95 Mar  9 18:34 pilot_heartbeat.json
[2026-03-09 18:34:07] -rw------- 1 boinc boinc    821195 Mar  9 18:34 log.48973281._001118.job.log.1
[2026-03-09 18:34:07] -rw------- 1 boinc boinc       357 Mar  9 18:34 output.list
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc       620 Mar  9 18:34 runtime_log
[2026-03-09 18:34:07] -rw------- 1 boinc boinc   1105920 Mar  9 18:34 result.tar.gz
[2026-03-09 18:34:07] -rw------- 1 boinc boinc       662 Mar  9 18:34 teeKDmt64H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDms8KLDmpjBedn.diag
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc      8921 Mar  9 18:34 runtime_log.err
[2026-03-09 18:34:07] -rw-r--r-- 1 boinc boinc      9121 Mar  9 18:34 stderr.txt
[2026-03-09 18:34:07] HITS file was successfully produced:
[2026-03-09 18:34:07] -rw------- 1 boinc boinc 211124946 Mar  9 18:33 shared/HITS.pool.root.1
[2026-03-09 18:34:07]  *** Contents of shared directory: ***
[2026-03-09 18:34:07] total 495448
[2026-03-09 18:34:07] -rw-r--r-- 2 boinc boinc 294485646 Mar  9 16:59 ATLAS.root_0
[2026-03-09 18:34:07] -rw-r--r-- 2 boinc boinc    597962 Mar  9 16:59 input.tar.gz
[2026-03-09 18:34:07] -rw-r--r-- 2 boinc boinc     15845 Mar  9 16:59 start_atlas.sh
[2026-03-09 18:34:07] -rw------- 1 boinc boinc 211124946 Mar  9 18:33 HITS.pool.root.1
[2026-03-09 18:34:07] -rw------- 1 boinc boinc   1105920 Mar  9 18:34 result.tar.gz
18:34:08 (2480323): run_atlas exited; CPU time 16180.980037
18:34:08 (2480323): called boinc_finish(0)

</stderr_txt>
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