Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:04:47 (30530): wrapper (7.7.26015): starting
01:04:47 (30530): wrapper: running run_atlas (--nthreads 12)
[2026-03-09 01:04:47] Arguments: --nthreads 12
[2026-03-09 01:04:47] Threads: 12
[2026-03-09 01:04:47] Checking for CVMFS
[2026-03-09 01:04:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 01:04:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 01:04:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 01:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 01:04:47] 2.11.2.0 2998 435512 103308 157065 3 52 15026249 20275200 1 130560 1 186811544 99.954 24992010 17746 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-09 01:04:47] CVMFS is ok
[2026-03-09 01:04:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 01:04:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 01:04:47] Further information can be found at the LHC@home message board.
[2026-03-09 01:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 01:04:47] Checking for apptainer binary...
[2026-03-09 01:04:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 01:04:48] Running /usr/bin/apptainer --version
[2026-03-09 01:04:48] apptainer version 1.3.2-1.el7
[2026-03-09 01:04:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 01:04:49] c-205-25.aglt2.org
[2026-03-09 01:04:49] apptainer works
[2026-03-09 01:04:49] Set ATHENA_PROC_NUMBER=12
[2026-03-09 01:04:49] Set ATHENA_CORE_NUMBER=12
[2026-03-09 01:04:49] Starting ATLAS job with PandaID=7034061472
[2026-03-09 01:04:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 03:28:28]  *** The last 200 lines of the pilot log: ***
[2026-03-09 03:28:28] 2026-03-09 07:27:35,402 | INFO     | mean x: 1773037278.5
[2026-03-09 03:28:28] 2026-03-09 07:27:35,402 | INFO     | mean y: 2695676.9384615384
[2026-03-09 03:28:28] 2026-03-09 07:27:35,403 | INFO     | intersect: -7536621701.896206
[2026-03-09 03:28:28] 2026-03-09 07:27:35,403 | INFO     | chi2: 0.008981557774060494
[2026-03-09 03:28:28] 2026-03-09 07:27:35,403 | INFO     | current chi2=0.008981557774060494 (change=79.50683116894993 %)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,403 | INFO     | sum of square deviations: 605592750.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,404 | INFO     | sum of deviations: 2771146796.0000005
[2026-03-09 03:28:28] 2026-03-09 07:27:35,404 | INFO     | mean x: 1773037431.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,404 | INFO     | mean y: 2695988.216
[2026-03-09 03:28:28] 2026-03-09 07:27:35,404 | INFO     | intersect: -8110589707.664147
[2026-03-09 03:28:28] 2026-03-09 07:27:35,404 | INFO     | chi2: 0.001021525839769407
[2026-03-09 03:28:28] 2026-03-09 07:27:35,404 | INFO     | current chi2=0.001021525839769407 (change=88.62640684982664 %)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,405 | INFO     | sum of square deviations: 535786790.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,405 | INFO     | sum of deviations: 2042515338.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,405 | INFO     | mean x: 1773037583.5
[2026-03-09 03:28:28] 2026-03-09 07:27:35,405 | INFO     | mean y: 2697576.1
[2026-03-09 03:28:28] 2026-03-09 07:27:35,406 | INFO     | intersect: -6756439690.328695
[2026-03-09 03:28:28] 2026-03-09 07:27:35,406 | INFO     | chi2: 0.000630026248105496
[2026-03-09 03:28:28] 2026-03-09 07:27:35,406 | INFO     | current chi2=0.000630026248105496 (change=38.32498175007356 %)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,406 | INFO     | sum of square deviations: 471562330.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,407 | INFO     | sum of deviations: 1470262748.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,407 | INFO     | mean x: 1773037736.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,407 | INFO     | mean y: 2698933.3652173914
[2026-03-09 03:28:28] 2026-03-09 07:27:35,407 | INFO     | intersect: -5525374808.316097
[2026-03-09 03:28:28] 2026-03-09 07:27:35,407 | INFO     | chi2: 0.00036282956348378346
[2026-03-09 03:28:28] 2026-03-09 07:27:35,407 | INFO     | current chi2=0.00036282956348378346 (change=42.41040518949478 %)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,408 | INFO     | sum of square deviations: 412686807.5
[2026-03-09 03:28:28] 2026-03-09 07:27:35,408 | INFO     | sum of deviations: 1024214644.0000001
[2026-03-09 03:28:28] 2026-03-09 07:27:35,408 | INFO     | mean x: 1773037888.5
[2026-03-09 03:28:28] 2026-03-09 07:27:35,408 | INFO     | mean y: 2700088.5272727273
[2026-03-09 03:28:28] 2026-03-09 07:27:35,408 | INFO     | intersect: -4397661969.977685
[2026-03-09 03:28:28] 2026-03-09 07:27:35,409 | INFO     | chi2: 0.0001779770086793393
[2026-03-09 03:28:28] 2026-03-09 07:27:35,409 | INFO     | current chi2=0.0001779770086793393 (change=50.94748978819255 %)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,409 | INFO     | sum of square deviations: 358927660.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,409 | INFO     | sum of deviations: 782079292.0000002
[2026-03-09 03:28:28] 2026-03-09 07:27:35,409 | INFO     | mean x: 1773038041.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,410 | INFO     | mean y: 2700771.419047619
[2026-03-09 03:28:28] 2026-03-09 07:27:35,410 | INFO     | intersect: -3860630173.3020897
[2026-03-09 03:28:28] 2026-03-09 07:27:35,410 | INFO     | chi2: 0.00012808091029792938
[2026-03-09 03:28:28] 2026-03-09 07:27:35,410 | INFO     | current chi2=0.00012808091029792938 (change=28.03513709532425 %)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,410 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,411 | INFO     | sum of deviations: 591339978.0000001
[2026-03-09 03:28:28] 2026-03-09 07:27:35,411 | INFO     | mean x: 1773038193.5
[2026-03-09 03:28:28] 2026-03-09 07:27:35,411 | INFO     | mean y: 2701366.8
[2026-03-09 03:28:28] 2026-03-09 07:27:35,411 | INFO     | intersect: -3378883874.7796264
[2026-03-09 03:28:28] 2026-03-09 07:27:35,411 | INFO     | chi2: 0.00010490067397659977
[2026-03-09 03:28:28] 2026-03-09 07:27:35,411 | INFO     | current chi2=0.00010490067397659977 (change=18.098119592849553 %)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,411 | INFO     | left removable region: 80
[2026-03-09 03:28:28] 2026-03-09 07:27:35,412 | INFO     | sum of square deviations: 48810217.5
[2026-03-09 03:28:28] 2026-03-09 07:27:35,412 | INFO     | sum of deviations: 66990566.0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,412 | INFO     | mean x: 1773039230.5
[2026-03-09 03:28:28] 2026-03-09 07:27:35,412 | INFO     | mean y: 2703538.925925926
[2026-03-09 03:28:28] 2026-03-09 07:27:35,412 | INFO     | intersect: -2430739860.32546
[2026-03-09 03:28:28] 2026-03-09 07:27:35,412 | INFO     | chi2: 3.2523956108291314e-05
[2026-03-09 03:28:28] 2026-03-09 07:27:35,413 | INFO     | current memory leak: 1.37 B/s (using 54 data points, chi2=0.00)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,413 | INFO     | could have reported an average CPU frequency of 1740 MHz (8 samples)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,413 | INFO     | ..............................
[2026-03-09 03:28:28] 2026-03-09 07:27:35,413 | INFO     | . Timing measurements:
[2026-03-09 03:28:28] 2026-03-09 07:27:35,413 | INFO     | . get job = 0 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,413 | INFO     | . initial setup = 7 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,413 | INFO     | . payload setup = 7 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,414 | INFO     | . stage-in = 0 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,414 | INFO     | . payload execution = 8518 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,414 | INFO     | . stage-out = 0 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,414 | INFO     | . log creation = 0 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,414 | INFO     | ..............................
[2026-03-09 03:28:28] 2026-03-09 07:27:35,491 | INFO     | 
[2026-03-09 03:28:28] 2026-03-09 07:27:35,492 | INFO     | job summary report
[2026-03-09 03:28:28] 2026-03-09 07:27:35,492 | INFO     | --------------------------------------------------
[2026-03-09 03:28:28] 2026-03-09 07:27:35,492 | INFO     | PanDA job id: 7034061472
[2026-03-09 03:28:28] 2026-03-09 07:27:35,492 | INFO     | task id: 48844229
[2026-03-09 03:28:28] 2026-03-09 07:27:35,492 | INFO     | errors: (none)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,493 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 03:28:28] 2026-03-09 07:27:35,493 | INFO     | pilot state: finished 
[2026-03-09 03:28:28] 2026-03-09 07:27:35,493 | INFO     | transexitcode: 0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,493 | INFO     | exeerrorcode: 0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,493 | INFO     | exeerrordiag: 
[2026-03-09 03:28:28] 2026-03-09 07:27:35,493 | INFO     | exitcode: 0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,494 | INFO     | exitmsg: OK
[2026-03-09 03:28:28] 2026-03-09 07:27:35,494 | INFO     | cpuconsumptiontime: 94083 s
[2026-03-09 03:28:28] 2026-03-09 07:27:35,494 | INFO     | nevents: 400
[2026-03-09 03:28:28] 2026-03-09 07:27:35,494 | INFO     | neventsw: 0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,494 | INFO     | pid: 7847
[2026-03-09 03:28:28] 2026-03-09 07:27:35,494 | INFO     | pgrp: 7847
[2026-03-09 03:28:28] 2026-03-09 07:27:35,494 | INFO     | corecount: 12
[2026-03-09 03:28:28] 2026-03-09 07:27:35,495 | INFO     | event service: False
[2026-03-09 03:28:28] 2026-03-09 07:27:35,495 | INFO     | sizes: {0: 2279888, 1: 2280349, 11: 2280349, 8529: 2308269, 8532: 2317267, 8533: 2317323, 8535: 2317645}
[2026-03-09 03:28:28] 2026-03-09 07:27:35,495 | INFO     | --------------------------------------------------
[2026-03-09 03:28:28] 2026-03-09 07:27:35,495 | INFO     | 
[2026-03-09 03:28:28] 2026-03-09 07:27:35,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-09 03:28:28] 2026-03-09 07:27:35,520 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,521 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,521 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,521 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,524 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,524 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 03:28:28] 2026-03-09 07:27:35,524 | INFO     | job 7034061472 has completed (purged errors)
[2026-03-09 03:28:28] 2026-03-09 07:27:35,524 | INFO     | overall cleanup function is called
[2026-03-09 03:28:28] 2026-03-09 07:27:36,532 | INFO     | --- collectZombieJob: --- 10, [7847]
[2026-03-09 03:28:28] 2026-03-09 07:27:36,532 | INFO     | zombie collector waiting for pid 7847
[2026-03-09 03:28:28] 2026-03-09 07:27:36,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 03:28:28] 2026-03-09 07:27:36,533 | INFO     | collected zombie processes
[2026-03-09 03:28:28] 2026-03-09 07:27:36,533 | INFO     | will attempt to kill all subprocesses of pid=7847
[2026-03-09 03:28:28] 2026-03-09 07:27:36,620 | INFO     | process IDs to be killed: [7847] (in reverse order)
[2026-03-09 03:28:28] 2026-03-09 07:27:36,673 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 03:28:28] 2026-03-09 07:27:36,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 03:28:28] 2026-03-09 07:27:36,676 | INFO     | did not find any defunct processes belonging to 7847
[2026-03-09 03:28:28] 2026-03-09 07:27:36,678 | INFO     | did not find any defunct processes belonging to 7847
[2026-03-09 03:28:28] 2026-03-09 07:27:36,679 | INFO     | ready for new job
[2026-03-09 03:28:28] 2026-03-09 07:27:36,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 03:28:28] 2026-03-09 07:27:36,680 | INFO     | **************************************
[2026-03-09 03:28:28] 2026-03-09 07:27:36,680 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 03:28:28] 2026-03-09 07:27:36,680 | INFO     | **************************************
[2026-03-09 03:28:28] 2026-03-09 07:27:36,680 | INFO     | 
[2026-03-09 03:28:28] 2026-03-09 07:27:36,681 | INFO     | architecture information:
[2026-03-09 03:28:28] 2026-03-09 07:27:36,681 | INFO     | executing command: cat /etc/os-release
[2026-03-09 03:28:28] 2026-03-09 07:27:36,697 | INFO     | cat /etc/os-release:
[2026-03-09 03:28:28] NAME="CentOS Linux"
[2026-03-09 03:28:28] VERSION="7 (Core)"
[2026-03-09 03:28:28] ID="centos"
[2026-03-09 03:28:28] ID_LIKE="rhel fedora"
[2026-03-09 03:28:28] VERSION_ID="7"
[2026-03-09 03:28:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 03:28:28] ANSI_COLOR="0;31"
[2026-03-09 03:28:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 03:28:28] HOME_URL="https://www.centos.org/"
[2026-03-09 03:28:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 03:28:28] 
[2026-03-09 03:28:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 03:28:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 03:28:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 03:28:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 03:28:28] 
[2026-03-09 03:28:28] 2026-03-09 07:27:36,697 | INFO     | **************************************
[2026-03-09 03:28:28] 2026-03-09 07:27:37,200 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-09 03:28:28] 2026-03-09 07:27:37,217 | INFO     | sufficient remaining disk space (29318184960 B)
[2026-03-09 03:28:28] 2026-03-09 07:27:37,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 03:28:28] 2026-03-09 07:27:37,218 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 03:28:28] 2026-03-09 07:27:37,218 | INFO     | update_server=False
[2026-03-09 03:28:28] 2026-03-09 07:27:37,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 03:28:28] 2026-03-09 07:27:37,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:28:28] 2026-03-09 07:27:37,471 | INFO     | all job control threads have been joined
[2026-03-09 03:28:28] 2026-03-09 07:27:37,657 | INFO     | all data control threads have been joined
[2026-03-09 03:28:28] 2026-03-09 07:27:37,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 03:28:28] 2026-03-09 07:27:37,734 | INFO     | aborting loop
[2026-03-09 03:28:28] 2026-03-09 07:27:37,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 03:28:28] 2026-03-09 07:27:38,224 | INFO     | [job] retrieve thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:38,224 | INFO     | [job] queue monitor thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:38,476 | INFO     | [job] control thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:38,503 | INFO     | [data] copytool_in thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:38,663 | INFO     | [data] control thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:38,673 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:38,675 | INFO     | all payload control threads have been joined
[2026-03-09 03:28:28] 2026-03-09 07:27:38,739 | INFO     | [job] job monitor thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,122 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,158 | INFO     | [job] validate thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,269 | INFO     | [payload] validate_post thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,410 | INFO     | [payload] failed_post thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,446 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,464 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,680 | INFO     | [payload] control thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:39,951 | INFO     | [data] copytool_out thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:27:40,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 03:28:28] 2026-03-09 07:27:44,216 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 03:28:28] 2026-03-09 07:28:07,155 | INFO     | PID=2168 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-09 03:28:28] 2026-03-09 07:28:07,156 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 03:28:28] 2026-03-09 07:28:07,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 03:28:28] 2026-03-09 07:28:07,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 03:28:28] 2026-03-09 07:28:23,061 | INFO     | [monitor] cgroup control has ended
[2026-03-09 03:28:28] 2026-03-09 07:28:23,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496627840832)>', '<ExcThread(monitor, started 140495728654080)>']
[2026-03-09 03:28:28] 2026-03-09 07:28:24,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 03:28:28] 2026-03-09 07:28:24,238 | INFO     | [monitor] control thread has ended
[2026-03-09 03:28:28] 2026-03-09 07:28:28,316 | INFO     | all workflow threads have been joined
[2026-03-09 03:28:28] 2026-03-09 07:28:28,316 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 03:28:28] 2026-03-09 07:28:28,316 | INFO     | traces error code: 0
[2026-03-09 03:28:28] 2026-03-09 07:28:28,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 03:28:28] 2026-03-09 07:28:28,405 [wrapper] ==== pilot stdout END ====
[2026-03-09 03:28:28] 2026-03-09 07:28:28,408 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 03:28:28] 2026-03-09 07:28:28,412 [wrapper] pilotpid: 2168
[2026-03-09 03:28:28] 2026-03-09 07:28:28,416 [wrapper] Pilot exit status: 0
[2026-03-09 03:28:28] 2026-03-09 07:28:28,431 [wrapper] pandaids: 7034061472
[2026-03-09 03:28:28] 2026-03-09 07:28:28,478 [wrapper] cleanup supervisor_pilot 11041 2169
[2026-03-09 03:28:28] 2026-03-09 07:28:28,481 [wrapper] Test setup, not cleaning
[2026-03-09 03:28:28] 2026-03-09 07:28:28,485 [wrapper] apfmon messages muted
[2026-03-09 03:28:28] 2026-03-09 07:28:28,489 [wrapper] ==== wrapper stdout END ====
[2026-03-09 03:28:28] 2026-03-09 07:28:28,493 [wrapper] ==== wrapper stderr END ====
[2026-03-09 03:28:28]  *** Error codes and diagnostics ***
[2026-03-09 03:28:28]     "exeErrorCode": 0,
[2026-03-09 03:28:28]     "exeErrorDiag": "",
[2026-03-09 03:28:28]     "pilotErrorCode": 0,
[2026-03-09 03:28:28]     "pilotErrorDiag": "",
[2026-03-09 03:28:28]  *** Listing of results directory ***
[2026-03-09 03:28:28] total 422724
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas    584627 Feb 28 19:35 pilot3.tar.gz
[2026-03-09 03:28:28] -rwx------ 1 boincer umatlas     36322 Feb 28 19:36 runpilot2-wrapper.sh
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas      5111 Feb 28 19:37 queuedata.json
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas       100 Mar  9 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 03:28:28] -rwxr-xr-x 1 boincer umatlas      7986 Mar  9 01:04 run_atlas
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas       105 Mar  9 01:04 job.xml
[2026-03-09 03:28:28] -rw-r--r-- 2 boincer umatlas 221620865 Mar  9 01:04 EVNT.48452810._000002.pool.root.1
[2026-03-09 03:28:28] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 01:04 start_atlas.sh
[2026-03-09 03:28:28] drwxrwx--x 2 boincer umatlas      4096 Mar  9 01:04 shared
[2026-03-09 03:28:28] -rw-r--r-- 2 boincer umatlas    597973 Mar  9 01:04 input.tar.gz
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas         0 Mar  9 01:04 boinc_lockfile
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas      2628 Mar  9 01:04 pandaJob.out
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas        57 Mar  9 01:04 setup.sh.local
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas    999108 Mar  9 01:05 agis_schedconf.cvmfs.json
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas   1511578 Mar  9 01:05 agis_ddmendpoints.agis.ALL.json
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas       445 Mar  9 01:05 workernode_map.json
[2026-03-09 03:28:28] drwx------ 5 boincer umatlas      4096 Mar  9 01:05 pilot3
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas      5952 Mar  9 03:20 init_data.xml
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas 203999781 Mar  9 03:26 HITS.48844229._000050.pool.root.1
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas       529 Mar  9 03:27 boinc_task_state.xml
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas      1048 Mar  9 03:27 memory_monitor_summary.json
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas    457476 Mar  9 03:27 log.48844229._000050.job.log.tgz.1
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas      6406 Mar  9 03:27 heartbeat.json
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas        95 Mar  9 03:28 pilot_heartbeat.json
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas      8192 Mar  9 03:28 boinc_mmap_file
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas        27 Mar  9 03:28 wrapper_checkpoint.txt
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas      4741 Mar  9 03:28 pilotlog.txt
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas   1203076 Mar  9 03:28 log.48844229._000050.job.log.1
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas       357 Mar  9 03:28 output.list
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas       620 Mar  9 03:28 runtime_log
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas   1679360 Mar  9 03:28 result.tar.gz
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas      9343 Mar  9 03:28 runtime_log.err
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas       660 Mar  9 03:28 c8sKDm7xjG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1U8KDmvOTWOm.diag
[2026-03-09 03:28:28] -rw-r--r-- 1 boincer umatlas     20871 Mar  9 03:28 stderr.txt
[2026-03-09 03:28:28] HITS file was successfully produced:
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas 203999781 Mar  9 03:26 shared/HITS.pool.root.1
[2026-03-09 03:28:28]  *** Contents of shared directory: ***
[2026-03-09 03:28:28] total 417892
[2026-03-09 03:28:28] -rw-r--r-- 2 boincer umatlas 221620865 Mar  9 01:04 ATLAS.root_0
[2026-03-09 03:28:28] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 01:04 start_atlas.sh
[2026-03-09 03:28:28] -rw-r--r-- 2 boincer umatlas    597973 Mar  9 01:04 input.tar.gz
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas 203999781 Mar  9 03:26 HITS.pool.root.1
[2026-03-09 03:28:28] -rw------- 1 boincer umatlas   1679360 Mar  9 03:28 result.tar.gz
03:28:29 (30530): run_atlas exited; CPU time 94056.199655
03:28:29 (30530): called boinc_finish(0)

</stderr_txt>
]]>

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