Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:26:59 (3538192): wrapper (7.7.26015): starting
23:26:59 (3538192): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 23:26:59] Arguments: --nthreads 4
[2026-03-09 23:26:59] Threads: 4
[2026-03-09 23:26:59] Checking for CVMFS
[2026-03-09 23:26:59] No cvmfs_config command found, will try listing directly
[2026-03-09 23:26:59] CVMFS is ok
[2026-03-09 23:26:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 23:26:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 23:26:59] Further information can be found at the LHC@home message board.
[2026-03-09 23:26:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 23:26:59] Checking for apptainer binary...
[2026-03-09 23:26:59] which: no apptainer in ((null))
[2026-03-09 23:26:59] apptainer is not installed, using version from CVMFS
[2026-03-09 23:26:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 23:27:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-09 23:27:00] apptainer works
[2026-03-09 23:27:00] Set ATHENA_PROC_NUMBER=4
[2026-03-09 23:27:00] Set ATHENA_CORE_NUMBER=4
[2026-03-09 23:27:00] Starting ATLAS job with PandaID=7046722391
[2026-03-09 23:27:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 02:55:49]  *** The last 200 lines of the pilot log: ***
[2026-03-10 02:55:49] 2026-03-10 01:55:11,527 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,527 | INFO     | log transfer has been attempted: DONE
[2026-03-10 02:55:49] 2026-03-10 01:55:11,527 | INFO     | job 7046722391 has finished - writing final server update
[2026-03-10 02:55:49] 2026-03-10 01:55:11,528 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1362053/.job.ad'
[2026-03-10 02:55:49] 2026-03-10 01:55:11,528 | INFO     | total number of processed events: 400 (read)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,578 | INFO     | using path: /var/lib/boinc/var/slot20/slots/4/PanDA_Pilot-7046722391/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,579 | INFO     | extracted standard info from prmon json
[2026-03-10 02:55:49] 2026-03-10 01:55:11,579 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 02:55:49] 2026-03-10 01:55:11,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 02:55:49] 2026-03-10 01:55:11,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 02:55:49] 2026-03-10 01:55:11,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 02:55:49] 2026-03-10 01:55:11,584 | INFO     | fitting pss+swap vs Time
[2026-03-10 02:55:49] 2026-03-10 01:55:11,585 | INFO     | sum of square deviations: 2632440055.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,587 | INFO     | sum of deviations: 16427441093.000002
[2026-03-10 02:55:49] 2026-03-10 01:55:11,587 | INFO     | mean x: 1773101462.5
[2026-03-10 02:55:49] 2026-03-10 01:55:11,587 | INFO     | mean y: 2345421.156862745
[2026-03-10 02:55:49] 2026-03-10 01:55:11,587 | INFO     | intersect: -11062491467.267897
[2026-03-10 02:55:49] 2026-03-10 01:55:11,587 | INFO     | chi2: 1.1931805171595666
[2026-03-10 02:55:49] 2026-03-10 01:55:11,588 | INFO     | sum of square deviations: 2443580700.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,589 | INFO     | sum of deviations: 15750749488.000002
[2026-03-10 02:55:49] 2026-03-10 01:55:11,589 | INFO     | mean x: 1773101310.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,589 | INFO     | mean y: 2344874.753768844
[2026-03-10 02:55:49] 2026-03-10 01:55:11,589 | INFO     | intersect: -11426651331.778158
[2026-03-10 02:55:49] 2026-03-10 01:55:11,590 | INFO     | chi2: 1.1937463696069321
[2026-03-10 02:55:49] 2026-03-10 01:55:11,590 | INFO     | current chi2=1.1937463696069321 (change=-0.04742387587022917 %)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,590 | INFO     | right removable region: 198
[2026-03-10 02:55:49] 2026-03-10 01:55:11,590 | INFO     | sum of square deviations: 2443580700.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,592 | INFO     | sum of deviations: -7034140397.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,592 | INFO     | mean x: 1773101615.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,592 | INFO     | mean y: 2364112.6281407033
[2026-03-10 02:55:49] 2026-03-10 01:55:11,592 | INFO     | intersect: 5106449972.390186
[2026-03-10 02:55:49] 2026-03-10 01:55:11,592 | INFO     | chi2: 0.02428736045359299
[2026-03-10 02:55:49] 2026-03-10 01:55:11,592 | INFO     | current chi2=0.02428736045359299 (change=97.96448566630887 %)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,593 | INFO     | sum of square deviations: 2263977332.5
[2026-03-10 02:55:49] 2026-03-10 01:55:11,594 | INFO     | sum of deviations: -6128368019.499999
[2026-03-10 02:55:49] 2026-03-10 01:55:11,594 | INFO     | mean x: 1773101767.5
[2026-03-10 02:55:49] 2026-03-10 01:55:11,594 | INFO     | mean y: 2363324.7783505153
[2026-03-10 02:55:49] 2026-03-10 01:55:11,594 | INFO     | intersect: 4801978590.920121
[2026-03-10 02:55:49] 2026-03-10 01:55:11,595 | INFO     | chi2: 0.02080023795342154
[2026-03-10 02:55:49] 2026-03-10 01:55:11,595 | INFO     | current chi2=0.02080023795342154 (change=14.357766488599951 %)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,595 | INFO     | left removable region: 20
[2026-03-10 02:55:49] 2026-03-10 01:55:11,595 | INFO     | sum of square deviations: 1748737904.5
[2026-03-10 02:55:49] 2026-03-10 01:55:11,596 | INFO     | sum of deviations: -2570445511.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,596 | INFO     | mean x: 1773101889.5
[2026-03-10 02:55:49] 2026-03-10 01:55:11,597 | INFO     | mean y: 2359586.0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,597 | INFO     | intersect: 2608617379.510813
[2026-03-10 02:55:49] 2026-03-10 01:55:11,597 | INFO     | chi2: 0.015289524740947979
[2026-03-10 02:55:49] 2026-03-10 01:55:11,597 | INFO     | current memory leak: -1.47 B/s (using 178 data points, chi2=0.02)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,598 | INFO     | could have reported an average CPU frequency of 2679 MHz (10 samples)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,598 | INFO     | ..............................
[2026-03-10 02:55:49] 2026-03-10 01:55:11,598 | INFO     | . Timing measurements:
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | . get job = 0 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | . initial setup = 8 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | . payload setup = 9 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | . stage-in = 0 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | . payload execution = 12438 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | . stage-out = 1 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | . log creation = 0 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,599 | INFO     | ..............................
[2026-03-10 02:55:49] 2026-03-10 01:55:11,706 | INFO     | 
[2026-03-10 02:55:49] 2026-03-10 01:55:11,710 | INFO     | job summary report
[2026-03-10 02:55:49] 2026-03-10 01:55:11,710 | INFO     | --------------------------------------------------
[2026-03-10 02:55:49] 2026-03-10 01:55:11,710 | INFO     | PanDA job id: 7046722391
[2026-03-10 02:55:49] 2026-03-10 01:55:11,710 | INFO     | task id: 48958554
[2026-03-10 02:55:49] 2026-03-10 01:55:11,710 | INFO     | errors: (none)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 02:55:49] 2026-03-10 01:55:11,710 | INFO     | pilot state: finished 
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | transexitcode: 0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | exeerrorcode: 0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | exeerrordiag: 
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | exitcode: 0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | exitmsg: OK
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | cpuconsumptiontime: 46474 s
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | nevents: 400
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | neventsw: 0
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | pid: 3547902
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | pgrp: 3547902
[2026-03-10 02:55:49] 2026-03-10 01:55:11,711 | INFO     | corecount: 4
[2026-03-10 02:55:49] 2026-03-10 01:55:11,712 | INFO     | event service: False
[2026-03-10 02:55:49] 2026-03-10 01:55:11,712 | INFO     | sizes: {0: 2279745, 1: 2280206, 12: 2280206, 12450: 2310422, 12452: 2319442, 12454: 2319498, 12457: 2319820}
[2026-03-10 02:55:49] 2026-03-10 01:55:11,712 | INFO     | --------------------------------------------------
[2026-03-10 02:55:49] 2026-03-10 01:55:11,712 | INFO     | 
[2026-03-10 02:55:49] 2026-03-10 01:55:11,712 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/4
[2026-03-10 02:55:49] 2026-03-10 01:55:11,754 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | job 7046722391 has completed (purged errors)
[2026-03-10 02:55:49] 2026-03-10 01:55:11,756 | INFO     | overall cleanup function is called
[2026-03-10 02:55:49] 2026-03-10 01:55:12,100 | INFO     | number of running child processes to parent process 3547902: 1
[2026-03-10 02:55:49] 2026-03-10 01:55:12,100 | INFO     | maximum number of monitored processes: 6
[2026-03-10 02:55:49] 2026-03-10 01:55:12,101 | INFO     | aborting job monitoring since job object (job id=7046722391) has expired
[2026-03-10 02:55:49] 2026-03-10 01:55:12,770 | INFO     | --- collectZombieJob: --- 10, [3547902]
[2026-03-10 02:55:49] 2026-03-10 01:55:12,770 | INFO     | zombie collector waiting for pid 3547902
[2026-03-10 02:55:49] 2026-03-10 01:55:12,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 02:55:49] 2026-03-10 01:55:12,770 | INFO     | collected zombie processes
[2026-03-10 02:55:49] 2026-03-10 01:55:12,770 | INFO     | will attempt to kill all subprocesses of pid=3547902
[2026-03-10 02:55:49] 2026-03-10 01:55:13,549 | INFO     | process IDs to be killed: [3547902] (in reverse order)
[2026-03-10 02:55:49] 2026-03-10 01:55:13,900 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 02:55:49] 2026-03-10 01:55:13,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 02:55:49] 2026-03-10 01:55:13,926 | INFO     | did not find any defunct processes belonging to 3547902
[2026-03-10 02:55:49] 2026-03-10 01:55:13,947 | INFO     | did not find any defunct processes belonging to 3547902
[2026-03-10 02:55:49] 2026-03-10 01:55:13,948 | INFO     | ready for new job
[2026-03-10 02:55:49] 2026-03-10 01:55:13,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 02:55:49] 2026-03-10 01:55:13,950 | INFO     | **************************************
[2026-03-10 02:55:49] 2026-03-10 01:55:13,950 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 02:55:49] 2026-03-10 01:55:13,951 | INFO     | **************************************
[2026-03-10 02:55:49] 2026-03-10 01:55:13,951 | INFO     | 
[2026-03-10 02:55:49] 2026-03-10 01:55:13,959 | INFO     | architecture information:
[2026-03-10 02:55:49] 2026-03-10 01:55:13,960 | INFO     | executing command: cat /etc/os-release
[2026-03-10 02:55:49] 2026-03-10 01:55:13,982 | INFO     | cat /etc/os-release:
[2026-03-10 02:55:49] NAME="CentOS Linux"
[2026-03-10 02:55:49] VERSION="7 (Core)"
[2026-03-10 02:55:49] ID="centos"
[2026-03-10 02:55:49] ID_LIKE="rhel fedora"
[2026-03-10 02:55:49] VERSION_ID="7"
[2026-03-10 02:55:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 02:55:49] ANSI_COLOR="0;31"
[2026-03-10 02:55:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 02:55:49] HOME_URL="https://www.centos.org/"
[2026-03-10 02:55:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 02:55:49] 
[2026-03-10 02:55:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 02:55:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 02:55:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 02:55:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 02:55:49] 
[2026-03-10 02:55:49] 2026-03-10 01:55:13,983 | INFO     | **************************************
[2026-03-10 02:55:49] 2026-03-10 01:55:14,487 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/4
[2026-03-10 02:55:49] 2026-03-10 01:55:14,512 | INFO     | sufficient remaining disk space (52323942400 B)
[2026-03-10 02:55:49] 2026-03-10 01:55:14,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 02:55:49] 2026-03-10 01:55:14,513 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 02:55:49] 2026-03-10 01:55:14,513 | INFO     | update_server=False
[2026-03-10 02:55:49] 2026-03-10 01:55:14,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 02:55:49] 2026-03-10 01:55:14,604 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 02:55:49] 2026-03-10 01:55:14,604 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 02:55:49] 2026-03-10 01:55:14,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:55:49] 2026-03-10 01:55:14,604 | INFO     | will abort loop
[2026-03-10 02:55:49] 2026-03-10 01:55:14,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 02:55:49] 2026-03-10 01:55:15,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 02:55:49] 2026-03-10 01:55:15,176 | INFO     | all data control threads have been joined
[2026-03-10 02:55:49] 2026-03-10 01:55:15,375 | INFO     | all payload control threads have been joined
[2026-03-10 02:55:49] 2026-03-10 01:55:15,514 | INFO     | [job] retrieve thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:15,572 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:15,621 | INFO     | [job] job monitor thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:15,918 | INFO     | [data] copytool_in thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:15,971 | INFO     | all job control threads have been joined
[2026-03-10 02:55:49] 2026-03-10 01:55:16,021 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,028 | INFO     | [payload] validate_post thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,181 | INFO     | [data] control thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,380 | INFO     | [payload] control thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,420 | INFO     | [job] validate thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,526 | INFO     | [payload] failed_post thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,685 | INFO     | [data] copytool_out thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:55:49] 2026-03-10 01:55:16,797 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:16,976 | INFO     | [job] control thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:17,721 | INFO     | [job] queue monitor thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:19,144 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:25,195 | INFO     | job.realtimelogging is not enabled
[2026-03-10 02:55:49] 2026-03-10 01:55:26,200 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 02:55:49] 2026-03-10 01:55:43,467 | INFO     | [monitor] cgroup control has ended
[2026-03-10 02:55:49] 2026-03-10 01:55:43,730 | INFO     | PID=3542659 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 02:55:49] 2026-03-10 01:55:43,730 | INFO     | .. there are 31 such processes running
[2026-03-10 02:55:49] 2026-03-10 01:55:43,730 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 02:55:49] 2026-03-10 01:55:43,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 02:55:49] 2026-03-10 01:55:43,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 02:55:49] 2026-03-10 01:55:44,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23044116784960)>', '<ExcThread(monitor, started 23043876595456)>']
[2026-03-10 02:55:49] 2026-03-10 01:55:44,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 02:55:49] 2026-03-10 01:55:44,735 | INFO     | [monitor] control thread has ended
[2026-03-10 02:55:49] 2026-03-10 01:55:49,036 | INFO     | all workflow threads have been joined
[2026-03-10 02:55:49] 2026-03-10 01:55:49,036 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 02:55:49] 2026-03-10 01:55:49,037 | INFO     | traces error code: 0
[2026-03-10 02:55:49] 2026-03-10 01:55:49,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 02:55:49] 2026-03-10 01:55:49,274 [wrapper] ==== pilot stdout END ====
[2026-03-10 02:55:49] 2026-03-10 01:55:49,277 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 02:55:49] 2026-03-10 01:55:49,284 [wrapper] pilotpid: 3542659
[2026-03-10 02:55:49] 2026-03-10 01:55:49,291 [wrapper] Pilot exit status: 0
[2026-03-10 02:55:49] 2026-03-10 01:55:49,355 [wrapper] pandaids: 7046722391
[2026-03-10 02:55:49] 2026-03-10 01:55:49,536 [wrapper] cleanup supervisor_pilot 4100126 3542660
[2026-03-10 02:55:49] 2026-03-10 01:55:49,540 [wrapper] Test setup, not cleaning
[2026-03-10 02:55:49] 2026-03-10 01:55:49,543 [wrapper] apfmon messages muted
[2026-03-10 02:55:49] 2026-03-10 01:55:49,548 [wrapper] ==== wrapper stdout END ====
[2026-03-10 02:55:49] 2026-03-10 01:55:49,551 [wrapper] ==== wrapper stderr END ====
[2026-03-10 02:55:49]  *** Error codes and diagnostics ***
[2026-03-10 02:55:49]     "exeErrorCode": 0,
[2026-03-10 02:55:49]     "exeErrorDiag": "",
[2026-03-10 02:55:49]     "pilotErrorCode": 0,
[2026-03-10 02:55:49]     "pilotErrorDiag": "",
[2026-03-10 02:55:49]  *** Listing of results directory ***
[2026-03-10 02:55:49] total 477800
[2026-03-10 02:55:49] -rwx------. 1 boinc boinc     36322 Mar  9 03:02 runpilot2-wrapper.sh
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc      5111 Mar  9 03:02 queuedata.json
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc    584627 Mar  9 03:02 pilot3.tar.gz
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc       100 Mar  9 23:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 02:55:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 23:26 run_atlas
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc       105 Mar  9 23:26 job.xml
[2026-03-10 02:55:49] -rw-r--r--. 2 boinc boinc 275299382 Mar  9 23:26 EVNT.48958551._000121.pool.root.1
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc      6617 Mar  9 23:26 init_data.xml
[2026-03-10 02:55:49] -rw-r--r--. 2 boinc boinc     15845 Mar  9 23:26 start_atlas.sh
[2026-03-10 02:55:49] drwxrwx--x. 2 boinc boinc      4096 Mar  9 23:26 shared
[2026-03-10 02:55:49] -rw-r--r--. 2 boinc boinc    597930 Mar  9 23:26 input.tar.gz
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc         0 Mar  9 23:26 boinc_lockfile
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc      2515 Mar  9 23:27 pandaJob.out
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc   1002738 Mar  9 23:27 agis_schedconf.cvmfs.json
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc       443 Mar  9 23:27 workernode_map.json
[2026-03-10 02:55:49] drwx------. 5 boinc boinc      4096 Mar  9 23:27 pilot3
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc 205886083 Mar 10 02:54 HITS.48958554._003038.pool.root.1
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc       530 Mar 10 02:54 boinc_task_state.xml
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc        95 Mar 10 02:54 pilot_heartbeat.json
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc      1030 Mar 10 02:55 memory_monitor_summary.json
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc   1511578 Mar 10 02:55 agis_ddmendpoints.agis.ALL.json
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc    361411 Mar 10 02:55 log.48958554._003038.job.log.tgz.1
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc      6348 Mar 10 02:55 heartbeat.json
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc      8192 Mar 10 02:55 boinc_mmap_file
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc        28 Mar 10 02:55 wrapper_checkpoint.txt
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc      5088 Mar 10 02:55 pilotlog.txt
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc   1714460 Mar 10 02:55 log.48958554._003038.job.log.1
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc       357 Mar 10 02:55 output.list
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc       620 Mar 10 02:55 runtime_log
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc   2088960 Mar 10 02:55 result.tar.gz
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc      9205 Mar 10 02:55 runtime_log.err
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc       666 Mar 10 02:55 POgNDm37eJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKwaLDmvKSDtm.diag
[2026-03-10 02:55:49] -rw-r--r--. 1 boinc boinc     21057 Mar 10 02:55 stderr.txt
[2026-03-10 02:55:49] HITS file was successfully produced:
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc 205886083 Mar 10 02:54 shared/HITS.pool.root.1
[2026-03-10 02:55:49]  *** Contents of shared directory: ***
[2026-03-10 02:55:49] total 472560
[2026-03-10 02:55:49] -rw-r--r--. 2 boinc boinc 275299382 Mar  9 23:26 ATLAS.root_0
[2026-03-10 02:55:49] -rw-r--r--. 2 boinc boinc     15845 Mar  9 23:26 start_atlas.sh
[2026-03-10 02:55:49] -rw-r--r--. 2 boinc boinc    597930 Mar  9 23:26 input.tar.gz
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc 205886083 Mar 10 02:54 HITS.pool.root.1
[2026-03-10 02:55:49] -rw-------. 1 boinc boinc   2088960 Mar 10 02:55 result.tar.gz
02:55:51 (3538192): run_atlas exited; CPU time 47222.064404
02:55:51 (3538192): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN