Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:53:06 (2085385): wrapper (7.7.26015): starting
05:53:06 (2085385): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 05:53:06] Arguments: --nthreads 4
[2026-03-10 05:53:06] Threads: 4
[2026-03-10 05:53:06] Checking for CVMFS
[2026-03-10 05:53:06] No cvmfs_config command found, will try listing directly
[2026-03-10 05:53:06] CVMFS is ok
[2026-03-10 05:53:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 05:53:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 05:53:06] Further information can be found at the LHC@home message board.
[2026-03-10 05:53:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 05:53:06] Checking for apptainer binary...
[2026-03-10 05:53:06] which: no apptainer in ((null))
[2026-03-10 05:53:06] apptainer is not installed, using version from CVMFS
[2026-03-10 05:53:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 05:53:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-10 05:53:07] apptainer works
[2026-03-10 05:53:07] Set ATHENA_PROC_NUMBER=4
[2026-03-10 05:53:07] Set ATHENA_CORE_NUMBER=4
[2026-03-10 05:53:07] Starting ATLAS job with PandaID=7040383230
[2026-03-10 05:53:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 07:16:33]  *** The last 200 lines of the pilot log: ***
[2026-03-10 07:16:33]  lfn=log.48955015._008746.job.log.tgz.1
[2026-03-10 07:16:33]  mtime=0
[2026-03-10 07:16:33]  protocol_id=None
[2026-03-10 07:16:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 07:16:33]  replicas=None
[2026-03-10 07:16:33]  scope=mc23_13p6TeV
[2026-03-10 07:16:33]  status=None
[2026-03-10 07:16:33]  status_code=0
[2026-03-10 07:16:33]  storage_token=
[2026-03-10 07:16:33]  surl=/var/lib/boinc/var/slot52/slots/6/PanDA_Pilot-7040383230/log.48955015._008746.job.log.tgz.1
[2026-03-10 07:16:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/74/log.48955015._008746.job.log.tgz.1
[2026-03-10 07:16:33]  workdir=None
[2026-03-10 07:16:33] ]
[2026-03-10 07:16:33] 2026-03-10 06:15:45,953 | INFO     | transferring file log.48955015._008746.job.log.tgz.1 from /var/lib/boinc/var/slot52/slots/6/PanDA_Pilot-7040383230/log.48955015._008746.job.log.tgz.1 to /var/lib/b
[2026-03-10 07:16:33] 2026-03-10 06:15:45,954 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot52/slots/6/PanDA_Pilot-7040383230/log.48955015._008746.job.log.tgz.1 /var/lib/boinc/var/slot52/slots/6/lo
[2026-03-10 07:16:33] 2026-03-10 06:15:45,970 | INFO     | adding to output.list: log.48955015._008746.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/74/log.48955015._008746.job.log.tg
[2026-03-10 07:16:33] 2026-03-10 06:15:45,971 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 07:16:33] 2026-03-10 06:15:45,971 | INFO     | summary of transferred files:
[2026-03-10 07:16:33] 2026-03-10 06:15:45,971 | INFO     |  -- lfn=log.48955015._008746.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 07:16:33] 2026-03-10 06:15:45,971 | INFO     | stage-out finished correctly
[2026-03-10 07:16:33] 2026-03-10 06:15:46,219 | INFO     | time since job start (4946s) is within the limit (349056.0s)
[2026-03-10 07:16:33] 2026-03-10 06:15:47,219 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 07:16:33] 2026-03-10 06:15:48,117 | INFO     | PID=2089955 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 07:16:33] 2026-03-10 06:15:48,117 | INFO     | .. there are 62 such processes running
[2026-03-10 07:16:33] 2026-03-10 06:15:48,653 | WARNING  | process 2095987 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 07:16:33] 2026-03-10 06:15:48,653 | INFO     | using path: /var/lib/boinc/var/slot52/slots/6/PanDA_Pilot-7040383230/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 07:16:33] 2026-03-10 06:15:49,118 | INFO     | time since job start (4949s) is within the limit (349056.0s)
[2026-03-10 07:16:33] 2026-03-10 06:15:49,273 | INFO     | number of running child processes to parent process 2095987: 1
[2026-03-10 07:16:33] 2026-03-10 06:15:49,273 | INFO     | maximum number of monitored processes: 6
[2026-03-10 07:16:33] 2026-03-10 06:15:50,280 | INFO     | job 7040383230 has state=finished
[2026-03-10 07:16:33] 2026-03-10 06:15:50,281 | INFO     | preparing for final server update for job 7040383230 in state='finished'
[2026-03-10 07:16:33] 2026-03-10 06:15:50,281 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/6/PanDA_Pilot-7040383230/jobReport.json
[2026-03-10 07:16:33] 2026-03-10 06:15:50,282 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/6/workernode_map.json
[2026-03-10 07:16:33] 2026-03-10 06:15:50,282 | INFO     | this job has now completed (state=finished)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,282 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,283 | INFO     | log transfer has been attempted: DONE
[2026-03-10 07:16:33] 2026-03-10 06:15:50,283 | INFO     | job 7040383230 has finished - writing final server update
[2026-03-10 07:16:33] 2026-03-10 06:15:50,286 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1722975/.job.ad'
[2026-03-10 07:16:33] 2026-03-10 06:15:50,286 | INFO     | total number of processed events: 400 (read)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,308 | INFO     | using path: /var/lib/boinc/var/slot52/slots/6/PanDA_Pilot-7040383230/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,309 | INFO     | extracted standard info from prmon json
[2026-03-10 07:16:33] 2026-03-10 06:15:50,309 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 07:16:33] 2026-03-10 06:15:50,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 07:16:33] 2026-03-10 06:15:50,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 07:16:33] 2026-03-10 06:15:50,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 07:16:33] 2026-03-10 06:15:50,310 | INFO     | fitting pss+swap vs Time
[2026-03-10 07:16:33] 2026-03-10 06:15:50,310 | INFO     | sum of square deviations: 125630262.5
[2026-03-10 07:16:33] 2026-03-10 06:15:50,310 | INFO     | sum of deviations: 314751032.99999994
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | mean x: 1773120952.5
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | mean y: 2325924.3513513515
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | intersect: -4440008592.249047
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | chi2: 0.00016794246775555854
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | current memory leak: 2.51 B/s (using 74 data points, chi2=0.00)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | could have reported an average CPU frequency of 3553 MHz (6 samples)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | ..............................
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . Timing measurements:
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . get job = 0 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . initial setup = 5 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . payload setup = 5 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . stage-in = 0 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . payload execution = 4925 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . stage-out = 0 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | . log creation = 0 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,311 | INFO     | ..............................
[2026-03-10 07:16:33] 2026-03-10 06:15:50,780 | INFO     | 
[2026-03-10 07:16:33] 2026-03-10 06:15:50,780 | INFO     | job summary report
[2026-03-10 07:16:33] 2026-03-10 06:15:50,780 | INFO     | --------------------------------------------------
[2026-03-10 07:16:33] 2026-03-10 06:15:50,780 | INFO     | PanDA job id: 7040383230
[2026-03-10 07:16:33] 2026-03-10 06:15:50,780 | INFO     | task id: 48955015
[2026-03-10 07:16:33] 2026-03-10 06:15:50,780 | INFO     | errors: (none)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | pilot state: finished 
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | transexitcode: 0
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | exeerrorcode: 0
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | exeerrordiag: 
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | exitcode: 0
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | exitmsg: OK
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | cpuconsumptiontime: 18396 s
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | nevents: 400
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | neventsw: 0
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | pid: 2095987
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | pgrp: 2095987
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | corecount: 4
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | event service: False
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | sizes: {0: 2280249, 11: 2280249, 4934: 2306674, 4935: 2315694, 4936: 2315750, 4939: 2315944}
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | --------------------------------------------------
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | 
[2026-03-10 07:16:33] 2026-03-10 06:15:50,781 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/6
[2026-03-10 07:16:33] 2026-03-10 06:15:50,812 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,814 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 07:16:33] 2026-03-10 06:15:50,814 | INFO     | job 7040383230 has completed (purged errors)
[2026-03-10 07:16:33] 2026-03-10 06:15:50,814 | INFO     | overall cleanup function is called
[2026-03-10 07:16:33] 2026-03-10 06:15:51,821 | INFO     | --- collectZombieJob: --- 10, [2095987]
[2026-03-10 07:16:33] 2026-03-10 06:15:51,822 | INFO     | zombie collector waiting for pid 2095987
[2026-03-10 07:16:33] 2026-03-10 06:15:51,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 07:16:33] 2026-03-10 06:15:51,822 | INFO     | collected zombie processes
[2026-03-10 07:16:33] 2026-03-10 06:15:51,822 | INFO     | will attempt to kill all subprocesses of pid=2095987
[2026-03-10 07:16:33] 2026-03-10 06:15:52,384 | INFO     | process IDs to be killed: [2095987] (in reverse order)
[2026-03-10 07:16:33] 2026-03-10 06:15:52,794 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 07:16:33] 2026-03-10 06:15:52,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 07:16:33] 2026-03-10 06:15:52,827 | INFO     | did not find any defunct processes belonging to 2095987
[2026-03-10 07:16:33] 2026-03-10 06:15:52,857 | INFO     | did not find any defunct processes belonging to 2095987
[2026-03-10 07:16:33] 2026-03-10 06:15:52,857 | INFO     | ready for new job
[2026-03-10 07:16:33] 2026-03-10 06:15:52,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 07:16:33] 2026-03-10 06:15:52,858 | INFO     | **************************************
[2026-03-10 07:16:33] 2026-03-10 06:15:52,858 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 07:16:33] 2026-03-10 06:15:52,858 | INFO     | **************************************
[2026-03-10 07:16:33] 2026-03-10 06:15:52,858 | INFO     | 
[2026-03-10 07:16:33] 2026-03-10 06:15:52,865 | INFO     | architecture information:
[2026-03-10 07:16:33] 2026-03-10 06:15:52,866 | INFO     | executing command: cat /etc/os-release
[2026-03-10 07:16:33] 2026-03-10 06:15:52,889 | INFO     | cat /etc/os-release:
[2026-03-10 07:16:33] NAME="CentOS Linux"
[2026-03-10 07:16:33] VERSION="7 (Core)"
[2026-03-10 07:16:33] ID="centos"
[2026-03-10 07:16:33] ID_LIKE="rhel fedora"
[2026-03-10 07:16:33] VERSION_ID="7"
[2026-03-10 07:16:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 07:16:33] ANSI_COLOR="0;31"
[2026-03-10 07:16:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 07:16:33] HOME_URL="https://www.centos.org/"
[2026-03-10 07:16:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 07:16:33] 
[2026-03-10 07:16:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 07:16:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 07:16:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 07:16:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 07:16:33] 
[2026-03-10 07:16:33] 2026-03-10 06:15:52,889 | INFO     | **************************************
[2026-03-10 07:16:33] 2026-03-10 06:15:53,392 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/6
[2026-03-10 07:16:33] 2026-03-10 06:15:53,439 | INFO     | sufficient remaining disk space (20633878528 B)
[2026-03-10 07:16:33] 2026-03-10 06:15:53,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 07:16:33] 2026-03-10 06:15:53,440 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 07:16:33] 2026-03-10 06:15:53,440 | INFO     | update_server=False
[2026-03-10 07:16:33] 2026-03-10 06:15:53,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 07:16:33] 2026-03-10 06:15:53,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:16:33] 2026-03-10 06:15:53,441 | INFO     | aborting loop
[2026-03-10 07:16:33] 2026-03-10 06:15:53,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 07:16:33] 2026-03-10 06:15:53,808 | INFO     | all payload control threads have been joined
[2026-03-10 07:16:33] 2026-03-10 06:15:54,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 07:16:33] 2026-03-10 06:15:54,229 | INFO     | all data control threads have been joined
[2026-03-10 07:16:33] 2026-03-10 06:15:54,377 | INFO     | all job control threads have been joined
[2026-03-10 07:16:33] 2026-03-10 06:15:54,447 | INFO     | [job] job monitor thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:54,448 | INFO     | [job] retrieve thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:54,814 | INFO     | [payload] control thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:54,818 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:54,979 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:55,151 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:55,195 | INFO     | [payload] failed_post thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:55,234 | INFO     | [data] control thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:55,305 | INFO     | [data] copytool_in thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:55,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:16:33] 2026-03-10 06:15:55,382 | INFO     | [job] control thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:55,751 | INFO     | [payload] validate_post thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:55,808 | INFO     | [job] validate thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:56,060 | INFO     | [data] copytool_out thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:56,379 | INFO     | [job] queue monitor thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:15:57,453 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:16:04,467 | INFO     | job.realtimelogging is not enabled
[2026-03-10 07:16:33] 2026-03-10 06:16:05,473 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 07:16:33] 2026-03-10 06:16:22,780 | INFO     | PID=2089955 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 07:16:33] 2026-03-10 06:16:22,780 | INFO     | .. there are 62 such processes running
[2026-03-10 07:16:33] 2026-03-10 06:16:22,781 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 07:16:33] 2026-03-10 06:16:22,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 07:16:33] 2026-03-10 06:16:22,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 07:16:33] 2026-03-10 06:16:27,858 | INFO     | [monitor] cgroup control has ended
[2026-03-10 07:16:33] 2026-03-10 06:16:28,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22946285311808)>', '<ExcThread(monitor, started 22946046555904)>']
[2026-03-10 07:16:33] 2026-03-10 06:16:28,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 07:16:33] 2026-03-10 06:16:28,817 | INFO     | [monitor] control thread has ended
[2026-03-10 07:16:33] 2026-03-10 06:16:33,544 | INFO     | all workflow threads have been joined
[2026-03-10 07:16:33] 2026-03-10 06:16:33,544 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 07:16:33] 2026-03-10 06:16:33,545 | INFO     | traces error code: 0
[2026-03-10 07:16:33] 2026-03-10 06:16:33,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 07:16:33] 2026-03-10 06:16:33,705 [wrapper] ==== pilot stdout END ====
[2026-03-10 07:16:33] 2026-03-10 06:16:33,708 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 07:16:33] 2026-03-10 06:16:33,714 [wrapper] pilotpid: 2089955
[2026-03-10 07:16:33] 2026-03-10 06:16:33,718 [wrapper] Pilot exit status: 0
[2026-03-10 07:16:33] 2026-03-10 06:16:33,731 [wrapper] pandaids: 7040383230
[2026-03-10 07:16:33] 2026-03-10 06:16:33,865 [wrapper] cleanup supervisor_pilot 3058022 2089956
[2026-03-10 07:16:33] 2026-03-10 06:16:33,868 [wrapper] Test setup, not cleaning
[2026-03-10 07:16:33] 2026-03-10 06:16:33,870 [wrapper] apfmon messages muted
[2026-03-10 07:16:33] 2026-03-10 06:16:33,872 [wrapper] ==== wrapper stdout END ====
[2026-03-10 07:16:33] 2026-03-10 06:16:33,875 [wrapper] ==== wrapper stderr END ====
[2026-03-10 07:16:33]  *** Error codes and diagnostics ***
[2026-03-10 07:16:33]     "exeErrorCode": 0,
[2026-03-10 07:16:33]     "exeErrorDiag": "",
[2026-03-10 07:16:33]     "pilotErrorCode": 0,
[2026-03-10 07:16:33]     "pilotErrorDiag": "",
[2026-03-10 07:16:33]  *** Listing of results directory ***
[2026-03-10 07:16:33] total 609277
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc    584627 Mar  9 01:36 pilot3.tar.gz
[2026-03-10 07:16:33] -rwx------. 1 boinc boinc     36322 Mar  9 01:40 runpilot2-wrapper.sh
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc      5111 Mar  9 01:41 queuedata.json
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc       100 Mar 10 05:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 07:16:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 05:53 run_atlas
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc       105 Mar 10 05:53 job.xml
[2026-03-10 07:16:33] -rw-r--r--. 2 boinc boinc 436517756 Mar 10 05:53 EVNT.46701403._002225.pool.root.1
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc      6705 Mar 10 05:53 init_data.xml
[2026-03-10 07:16:33] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:53 start_atlas.sh
[2026-03-10 07:16:33] drwxrwx--x. 2 boinc boinc         5 Mar 10 05:53 shared
[2026-03-10 07:16:33] -rw-r--r--. 2 boinc boinc    597960 Mar 10 05:53 input.tar.gz
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc         0 Mar 10 05:53 boinc_lockfile
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc      2572 Mar 10 05:53 pandaJob.out
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc   1006495 Mar 10 05:53 agis_schedconf.cvmfs.json
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc   1511578 Mar 10 05:53 agis_ddmendpoints.agis.ALL.json
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc       444 Mar 10 05:53 workernode_map.json
[2026-03-10 07:16:33] drwx------. 5 boinc boinc        22 Mar 10 05:53 pilot3
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc 184813395 Mar 10 07:15 HITS.48955015._008746.pool.root.1
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc       530 Mar 10 07:15 boinc_task_state.xml
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc        95 Mar 10 07:15 pilot_heartbeat.json
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc      1045 Mar 10 07:15 memory_monitor_summary.json
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc    307155 Mar 10 07:15 log.48955015._008746.job.log.tgz.1
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc      6380 Mar 10 07:15 heartbeat.json
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc        27 Mar 10 07:16 wrapper_checkpoint.txt
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc      8192 Mar 10 07:16 boinc_mmap_file
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc      4901 Mar 10 07:16 pilotlog.txt
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc    718164 Mar 10 07:16 log.48955015._008746.job.log.1
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc       357 Mar 10 07:16 output.list
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc       620 Mar 10 07:16 runtime_log
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc   1044480 Mar 10 07:16 result.tar.gz
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc      9204 Mar 10 07:16 runtime_log.err
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc       670 Mar 10 07:16 2XaLDmLqdJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMvaLDmuRLM8m.diag
[2026-03-10 07:16:33] -rw-r--r--. 1 boinc boinc     21610 Mar 10 07:16 stderr.txt
[2026-03-10 07:16:33] HITS file was successfully produced:
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc 184813395 Mar 10 07:15 shared/HITS.pool.root.1
[2026-03-10 07:16:33]  *** Contents of shared directory: ***
[2026-03-10 07:16:33] total 607811
[2026-03-10 07:16:33] -rw-r--r--. 2 boinc boinc 436517756 Mar 10 05:53 ATLAS.root_0
[2026-03-10 07:16:33] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:53 start_atlas.sh
[2026-03-10 07:16:33] -rw-r--r--. 2 boinc boinc    597960 Mar 10 05:53 input.tar.gz
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc 184813395 Mar 10 07:15 HITS.pool.root.1
[2026-03-10 07:16:33] -rw-------. 1 boinc boinc   1044480 Mar 10 07:16 result.tar.gz
07:16:35 (2085385): run_atlas exited; CPU time 18643.121723
07:16:35 (2085385): called boinc_finish(0)

</stderr_txt>
]]>

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