Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:37 (1428593): wrapper (7.7.26015): starting
14:48:37 (1428593): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 14:48:37] Arguments: --nthreads 4
[2026-03-10 14:48:37] Threads: 4
[2026-03-10 14:48:37] Checking for CVMFS
[2026-03-10 14:48:37] No cvmfs_config command found, will try listing directly
[2026-03-10 14:48:37] CVMFS is ok
[2026-03-10 14:48:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 14:48:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 14:48:37] Further information can be found at the LHC@home message board.
[2026-03-10 14:48:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 14:48:37] Checking for apptainer binary...
[2026-03-10 14:48:37] which: no apptainer in ((null))
[2026-03-10 14:48:37] apptainer is not installed, using version from CVMFS
[2026-03-10 14:48:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 14:48:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot188/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-10 14:48:37] apptainer works
[2026-03-10 14:48:37] Set ATHENA_PROC_NUMBER=4
[2026-03-10 14:48:37] Set ATHENA_CORE_NUMBER=4
[2026-03-10 14:48:37] Starting ATLAS job with PandaID=7040503640
[2026-03-10 14:48:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot188/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 16:06:21]  *** The last 200 lines of the pilot log: ***
[2026-03-10 16:06:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 16:06:21]  is_altstaged=None
[2026-03-10 16:06:21]  is_tar=False
[2026-03-10 16:06:21]  lfn=log.48955006._032483.job.log.tgz.1
[2026-03-10 16:06:21]  mtime=0
[2026-03-10 16:06:21]  protocol_id=None
[2026-03-10 16:06:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 16:06:21]  replicas=None
[2026-03-10 16:06:21]  scope=mc23_13p6TeV
[2026-03-10 16:06:21]  status=None
[2026-03-10 16:06:21]  status_code=0
[2026-03-10 16:06:21]  storage_token=
[2026-03-10 16:06:21]  surl=/var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040503640/log.48955006._032483.job.log.tgz.1
[2026-03-10 16:06:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/11/log.48955006._032483.job.log.tgz.1
[2026-03-10 16:06:21]  workdir=None
[2026-03-10 16:06:21] ]
[2026-03-10 16:06:21] 2026-03-10 15:05:07,161 | INFO     | transferring file log.48955006._032483.job.log.tgz.1 from /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040503640/log.48955006._032483.job.log.tgz.1 to /var/lib/
[2026-03-10 16:06:21] 2026-03-10 15:05:07,161 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040503640/log.48955006._032483.job.log.tgz.1 /var/lib/boinc/var/slot188/slots/0/
[2026-03-10 16:06:21] 2026-03-10 15:05:07,177 | INFO     | adding to output.list: log.48955006._032483.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/11/log.48955006._032483.job.log.tg
[2026-03-10 16:06:21] 2026-03-10 15:05:07,177 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 16:06:21] 2026-03-10 15:05:07,177 | INFO     | summary of transferred files:
[2026-03-10 16:06:21] 2026-03-10 15:05:07,177 | INFO     |  -- lfn=log.48955006._032483.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 16:06:21] 2026-03-10 15:05:07,177 | INFO     | stage-out finished correctly
[2026-03-10 16:06:21] 2026-03-10 15:05:07,647 | INFO     | monitor loop #333: job 0:7040503640 is in state 'finished'
[2026-03-10 16:06:21] 2026-03-10 15:05:07,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 16:06:21] 2026-03-10 15:05:09,095 | INFO     | time since job start (4578s) is within the limit (349056.0s)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,151 | INFO     | monitor loop #334: job 0:7040503640 is in state 'finished'
[2026-03-10 16:06:21] 2026-03-10 15:05:10,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,228 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 16:06:21] 2026-03-10 15:05:10,281 | INFO     | job 7040503640 has state=finished
[2026-03-10 16:06:21] 2026-03-10 15:05:10,281 | INFO     | preparing for final server update for job 7040503640 in state='finished'
[2026-03-10 16:06:21] 2026-03-10 15:05:10,281 | INFO     | reading metadata from: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040503640/jobReport.json
[2026-03-10 16:06:21] 2026-03-10 15:05:10,283 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot188/slots/0/workernode_map.json
[2026-03-10 16:06:21] 2026-03-10 15:05:10,284 | INFO     | this job has now completed (state=finished)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,284 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,284 | INFO     | log transfer has been attempted: DONE
[2026-03-10 16:06:21] 2026-03-10 15:05:10,284 | INFO     | job 7040503640 has finished - writing final server update
[2026-03-10 16:06:21] 2026-03-10 15:05:10,284 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1894257/.job.ad'
[2026-03-10 16:06:21] 2026-03-10 15:05:10,284 | INFO     | total number of processed events: 400 (read)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,302 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040503640/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,302 | INFO     | extracted standard info from prmon json
[2026-03-10 16:06:21] 2026-03-10 15:05:10,302 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 16:06:21] 2026-03-10 15:05:10,303 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 16:06:21] 2026-03-10 15:05:10,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 16:06:21] 2026-03-10 15:05:10,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 16:06:21] 2026-03-10 15:05:10,304 | INFO     | fitting pss+swap vs Time
[2026-03-10 16:06:21] 2026-03-10 15:05:10,305 | INFO     | sum of square deviations: 97479037.0
[2026-03-10 16:06:21] 2026-03-10 15:05:10,305 | INFO     | sum of deviations: -25394727.00000002
[2026-03-10 16:06:21] 2026-03-10 15:05:10,305 | INFO     | mean x: 1773152901.5
[2026-03-10 16:06:21] 2026-03-10 15:05:10,305 | INFO     | mean y: 2332772.3235294116
[2026-03-10 16:06:21] 2026-03-10 15:05:10,305 | INFO     | intersect: 464265258.0009415
[2026-03-10 16:06:21] 2026-03-10 15:05:10,305 | INFO     | chi2: 0.0005051801319632798
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | current memory leak: -0.26 B/s (using 68 data points, chi2=0.00)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | could have reported an average CPU frequency of 3669 MHz (6 samples)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | ..............................
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . Timing measurements:
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . get job = 0 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . initial setup = 5 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . payload setup = 5 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . stage-in = 0 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . payload execution = 4555 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . stage-out = 0 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | . log creation = 0 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,306 | INFO     | ..............................
[2026-03-10 16:06:21] 2026-03-10 15:05:10,402 | INFO     | 
[2026-03-10 16:06:21] 2026-03-10 15:05:10,402 | INFO     | job summary report
[2026-03-10 16:06:21] 2026-03-10 15:05:10,403 | INFO     | --------------------------------------------------
[2026-03-10 16:06:21] 2026-03-10 15:05:10,403 | INFO     | PanDA job id: 7040503640
[2026-03-10 16:06:21] 2026-03-10 15:05:10,403 | INFO     | task id: 48955006
[2026-03-10 16:06:21] 2026-03-10 15:05:10,403 | INFO     | errors: (none)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 16:06:21] 2026-03-10 15:05:10,403 | INFO     | pilot state: finished 
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | transexitcode: 0
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | exeerrorcode: 0
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | exeerrordiag: 
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | exitcode: 0
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | exitmsg: OK
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | cpuconsumptiontime: 17491 s
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | nevents: 400
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | neventsw: 0
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | pid: 1518145
[2026-03-10 16:06:21] 2026-03-10 15:05:10,404 | INFO     | pgrp: 1518145
[2026-03-10 16:06:21] 2026-03-10 15:05:10,405 | INFO     | corecount: 4
[2026-03-10 16:06:21] 2026-03-10 15:05:10,405 | INFO     | event service: False
[2026-03-10 16:06:21] 2026-03-10 15:05:10,405 | INFO     | sizes: {0: 2280242, 11: 2280242, 4564: 2306444, 4565: 2315466, 4568: 2315716}
[2026-03-10 16:06:21] 2026-03-10 15:05:10,405 | INFO     | --------------------------------------------------
[2026-03-10 16:06:21] 2026-03-10 15:05:10,405 | INFO     | 
[2026-03-10 16:06:21] 2026-03-10 15:05:10,405 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot188/slots/0
[2026-03-10 16:06:21] 2026-03-10 15:05:10,425 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,425 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,427 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 16:06:21] 2026-03-10 15:05:10,428 | INFO     | job 7040503640 has completed (purged errors)
[2026-03-10 16:06:21] 2026-03-10 15:05:10,428 | INFO     | overall cleanup function is called
[2026-03-10 16:06:21] 2026-03-10 15:05:11,435 | INFO     | --- collectZombieJob: --- 10, [1518145]
[2026-03-10 16:06:21] 2026-03-10 15:05:11,435 | INFO     | zombie collector waiting for pid 1518145
[2026-03-10 16:06:21] 2026-03-10 15:05:11,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 16:06:21] 2026-03-10 15:05:11,435 | INFO     | collected zombie processes
[2026-03-10 16:06:21] 2026-03-10 15:05:11,435 | INFO     | will attempt to kill all subprocesses of pid=1518145
[2026-03-10 16:06:21] 2026-03-10 15:05:11,900 | INFO     | process IDs to be killed: [1518145] (in reverse order)
[2026-03-10 16:06:21] 2026-03-10 15:05:12,115 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 16:06:21] 2026-03-10 15:05:12,116 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 16:06:21] 2026-03-10 15:05:12,146 | INFO     | did not find any defunct processes belonging to 1518145
[2026-03-10 16:06:21] 2026-03-10 15:05:12,176 | INFO     | did not find any defunct processes belonging to 1518145
[2026-03-10 16:06:21] 2026-03-10 15:05:12,176 | INFO     | ready for new job
[2026-03-10 16:06:21] 2026-03-10 15:05:12,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 16:06:21] 2026-03-10 15:05:12,177 | INFO     | **************************************
[2026-03-10 16:06:21] 2026-03-10 15:05:12,177 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 16:06:21] 2026-03-10 15:05:12,177 | INFO     | **************************************
[2026-03-10 16:06:21] 2026-03-10 15:05:12,177 | INFO     | 
[2026-03-10 16:06:21] 2026-03-10 15:05:12,183 | INFO     | architecture information:
[2026-03-10 16:06:21] 2026-03-10 15:05:12,183 | INFO     | executing command: cat /etc/os-release
[2026-03-10 16:06:21] 2026-03-10 15:05:12,195 | INFO     | cat /etc/os-release:
[2026-03-10 16:06:21] NAME="CentOS Linux"
[2026-03-10 16:06:21] VERSION="7 (Core)"
[2026-03-10 16:06:21] ID="centos"
[2026-03-10 16:06:21] ID_LIKE="rhel fedora"
[2026-03-10 16:06:21] VERSION_ID="7"
[2026-03-10 16:06:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 16:06:21] ANSI_COLOR="0;31"
[2026-03-10 16:06:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 16:06:21] HOME_URL="https://www.centos.org/"
[2026-03-10 16:06:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 16:06:21] 
[2026-03-10 16:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 16:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 16:06:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 16:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 16:06:21] 
[2026-03-10 16:06:21] 2026-03-10 15:05:12,195 | INFO     | **************************************
[2026-03-10 16:06:21] 2026-03-10 15:05:12,697 | INFO     | executing command: df -mP /var/lib/boinc/var/slot188/slots/0
[2026-03-10 16:06:21] 2026-03-10 15:05:12,709 | INFO     | sufficient remaining disk space (20182990848 B)
[2026-03-10 16:06:21] 2026-03-10 15:05:12,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 16:06:21] 2026-03-10 15:05:12,709 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 16:06:21] 2026-03-10 15:05:12,710 | INFO     | update_server=False
[2026-03-10 16:06:21] 2026-03-10 15:05:12,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 16:06:21] 2026-03-10 15:05:12,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 16:06:21] 2026-03-10 15:05:12,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 16:06:21] 2026-03-10 15:05:12,761 | INFO     | all data control threads have been joined
[2026-03-10 16:06:21] 2026-03-10 15:05:12,795 | INFO     | all job control threads have been joined
[2026-03-10 16:06:21] 2026-03-10 15:05:13,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 16:06:21] 2026-03-10 15:05:13,660 | INFO     | aborting loop
[2026-03-10 16:06:21] 2026-03-10 15:05:13,714 | INFO     | [job] retrieve thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:13,767 | INFO     | [data] control thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:13,801 | INFO     | [job] control thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:13,930 | INFO     | [job] validate thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:14,065 | INFO     | [payload] validate_post thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:14,087 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:14,125 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:14,191 | INFO     | all payload control threads have been joined
[2026-03-10 16:06:21] 2026-03-10 15:05:14,437 | INFO     | [payload] failed_post thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:14,498 | INFO     | [data] copytool_in thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:14,665 | INFO     | [job] job monitor thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:14,753 | INFO     | [data] copytool_out thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:15,139 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:15,194 | INFO     | [payload] control thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:15,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 16:06:21] 2026-03-10 15:05:16,417 | INFO     | [job] queue monitor thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:16,717 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:23,460 | INFO     | job.realtimelogging is not enabled
[2026-03-10 16:06:21] 2026-03-10 15:05:24,465 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 16:06:21] 2026-03-10 15:05:42,639 | INFO     | PID=1464956 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 16:06:21] 2026-03-10 15:05:42,639 | INFO     | .. there are 41 such processes running
[2026-03-10 16:06:21] 2026-03-10 15:05:42,640 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 16:06:21] 2026-03-10 15:05:42,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 16:06:21] 2026-03-10 15:05:42,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 16:06:21] 2026-03-10 15:05:58,162 | INFO     | [monitor] cgroup control has ended
[2026-03-10 16:06:21] 2026-03-10 15:05:59,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23313835661120)>', '<ExcThread(monitor, started 23313597609728)>']
[2026-03-10 16:06:21] 2026-03-10 15:05:59,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 16:06:21] 2026-03-10 15:05:59,733 | INFO     | [monitor] control thread has ended
[2026-03-10 16:06:21] 2026-03-10 15:06:04,226 | INFO     | all workflow threads have been joined
[2026-03-10 16:06:21] 2026-03-10 15:06:04,226 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 16:06:21] 2026-03-10 15:06:04,226 | INFO     | traces error code: 0
[2026-03-10 16:06:21] 2026-03-10 15:06:04,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 16:06:21] 2026-03-10 15:06:04,365 [wrapper] ==== pilot stdout END ====
[2026-03-10 16:06:21] 2026-03-10 15:06:04,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 16:06:21] 2026-03-10 15:06:04,369 [wrapper] pilotpid: 1464956
[2026-03-10 16:06:21] 2026-03-10 15:06:04,371 [wrapper] Pilot exit status: 0
[2026-03-10 16:06:21] 2026-03-10 15:06:04,377 [wrapper] pandaids: 7040503640
[2026-03-10 16:06:21] 2026-03-10 15:06:04,506 [wrapper] cleanup supervisor_pilot 2157353 1464959
[2026-03-10 16:06:21] 2026-03-10 15:06:04,510 [wrapper] Test setup, not cleaning
[2026-03-10 16:06:21] 2026-03-10 15:06:04,512 [wrapper] apfmon messages muted
[2026-03-10 16:06:21] 2026-03-10 15:06:04,515 [wrapper] ==== wrapper stdout END ====
[2026-03-10 16:06:21] 2026-03-10 15:06:04,517 [wrapper] ==== wrapper stderr END ====
[2026-03-10 16:06:21]  *** Error codes and diagnostics ***
[2026-03-10 16:06:21]     "exeErrorCode": 0,
[2026-03-10 16:06:21]     "exeErrorDiag": "",
[2026-03-10 16:06:21]     "pilotErrorCode": 0,
[2026-03-10 16:06:21]     "pilotErrorDiag": "",
[2026-03-10 16:06:21]  *** Listing of results directory ***
[2026-03-10 16:06:21] total 621780
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-10 16:06:21] -rwx------. 1 boinc boinc     36322 Mar  9 05:16 runpilot2-wrapper.sh
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc      5111 Mar  9 05:17 queuedata.json
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc       100 Mar 10 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 16:06:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 14:48 run_atlas
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc       105 Mar 10 14:48 job.xml
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc      6709 Mar 10 14:48 init_data.xml
[2026-03-10 16:06:21] -rw-r--r--. 2 boinc boinc 441634083 Mar 10 14:48 EVNT.46701403._000650.pool.root.1
[2026-03-10 16:06:21] -rw-r--r--. 2 boinc boinc     15845 Mar 10 14:48 start_atlas.sh
[2026-03-10 16:06:21] drwxrwx--x. 2 boinc boinc      4096 Mar 10 14:48 shared
[2026-03-10 16:06:21] -rw-r--r--. 2 boinc boinc    597954 Mar 10 14:48 input.tar.gz
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc         0 Mar 10 14:48 boinc_lockfile
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc      2564 Mar 10 14:48 pandaJob.out
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc   1006729 Mar 10 14:48 agis_schedconf.cvmfs.json
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc   1511578 Mar 10 14:48 agis_ddmendpoints.agis.ALL.json
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc       444 Mar 10 14:48 workernode_map.json
[2026-03-10 16:06:21] drwx------. 5 boinc boinc      4096 Mar 10 14:48 pilot3
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc 189255929 Mar 10 16:04 HITS.48955006._032483.pool.root.1
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc      1028 Mar 10 16:05 memory_monitor_summary.json
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc       528 Mar 10 16:05 boinc_task_state.xml
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc    265212 Mar 10 16:05 log.48955006._032483.job.log.tgz.1
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc      6349 Mar 10 16:05 heartbeat.json
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc        95 Mar 10 16:05 pilot_heartbeat.json
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc      4902 Mar 10 16:06 pilotlog.txt
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc    674072 Mar 10 16:06 log.48955006._032483.job.log.1
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc       357 Mar 10 16:06 output.list
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc       620 Mar 10 16:06 runtime_log
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc    952320 Mar 10 16:06 result.tar.gz
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc       662 Mar 10 16:06 1WKLDm3DhJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXwYLDmPLaBHm.diag
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc      9221 Mar 10 16:06 runtime_log.err
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc        26 Mar 10 16:06 wrapper_checkpoint.txt
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc      8192 Mar 10 16:06 boinc_mmap_file
[2026-03-10 16:06:21] -rw-r--r--. 1 boinc boinc     21296 Mar 10 16:06 stderr.txt
[2026-03-10 16:06:21] HITS file was successfully produced:
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc 189255929 Mar 10 16:04 shared/HITS.pool.root.1
[2026-03-10 16:06:21]  *** Contents of shared directory: ***
[2026-03-10 16:06:21] total 617648
[2026-03-10 16:06:21] -rw-r--r--. 2 boinc boinc 441634083 Mar 10 14:48 ATLAS.root_0
[2026-03-10 16:06:21] -rw-r--r--. 2 boinc boinc     15845 Mar 10 14:48 start_atlas.sh
[2026-03-10 16:06:21] -rw-r--r--. 2 boinc boinc    597954 Mar 10 14:48 input.tar.gz
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc 189255929 Mar 10 16:04 HITS.pool.root.1
[2026-03-10 16:06:21] -rw-------. 1 boinc boinc    952320 Mar 10 16:06 result.tar.gz
16:06:22 (1428593): run_atlas exited; CPU time 17693.503306
16:06:22 (1428593): called boinc_finish(0)

</stderr_txt>
]]>

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