Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:53:48 (3048176): wrapper (7.7.26015): starting
02:53:48 (3048176): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:53:48] Arguments: --nthreads 4
[2026-03-10 02:53:48] Threads: 4
[2026-03-10 02:53:48] Checking for CVMFS
[2026-03-10 02:53:48] No cvmfs_config command found, will try listing directly
[2026-03-10 02:53:48] CVMFS is ok
[2026-03-10 02:53:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:53:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:53:48] Further information can be found at the LHC@home message board.
[2026-03-10 02:53:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:53:48] Checking for apptainer binary...
[2026-03-10 02:53:48] which: no apptainer in ((null))
[2026-03-10 02:53:48] apptainer is not installed, using version from CVMFS
[2026-03-10 02:53:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:53:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-10 02:53:48] apptainer works
[2026-03-10 02:53:48] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:53:48] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:53:48] Starting ATLAS job with PandaID=7040452433
[2026-03-10 02:53:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 04:13:13]  *** The last 200 lines of the pilot log: ***
[2026-03-10 04:13:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 04:13:13]  is_altstaged=None
[2026-03-10 04:13:13]  is_tar=False
[2026-03-10 04:13:13]  lfn=log.48955006._031944.job.log.tgz.1
[2026-03-10 04:13:13]  mtime=0
[2026-03-10 04:13:13]  protocol_id=None
[2026-03-10 04:13:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 04:13:13]  replicas=None
[2026-03-10 04:13:13]  scope=mc23_13p6TeV
[2026-03-10 04:13:13]  status=None
[2026-03-10 04:13:13]  status_code=0
[2026-03-10 04:13:13]  storage_token=
[2026-03-10 04:13:13]  surl=/var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040452433/log.48955006._031944.job.log.tgz.1
[2026-03-10 04:13:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/46/log.48955006._031944.job.log.tgz.1
[2026-03-10 04:13:13]  workdir=None
[2026-03-10 04:13:13] ]
[2026-03-10 04:13:13] 2026-03-10 03:12:08,989 | INFO     | transferring file log.48955006._031944.job.log.tgz.1 from /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040452433/log.48955006._031944.job.log.tgz.1 to /var/lib/b
[2026-03-10 04:13:13] 2026-03-10 03:12:08,989 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040452433/log.48955006._031944.job.log.tgz.1 /var/lib/boinc/var/slot52/slots/9/lo
[2026-03-10 04:13:13] 2026-03-10 03:12:09,008 | INFO     | adding to output.list: log.48955006._031944.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/46/log.48955006._031944.job.log.tg
[2026-03-10 04:13:13] 2026-03-10 03:12:09,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 04:13:13] 2026-03-10 03:12:09,009 | INFO     | summary of transferred files:
[2026-03-10 04:13:13] 2026-03-10 03:12:09,009 | INFO     |  -- lfn=log.48955006._031944.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 04:13:13] 2026-03-10 03:12:09,009 | INFO     | stage-out finished correctly
[2026-03-10 04:13:13] 2026-03-10 03:12:09,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 04:13:13] 2026-03-10 03:12:09,587 | INFO     | job 7040452433 has state=finished
[2026-03-10 04:13:13] 2026-03-10 03:12:09,587 | INFO     | preparing for final server update for job 7040452433 in state='finished'
[2026-03-10 04:13:13] 2026-03-10 03:12:09,588 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040452433/jobReport.json
[2026-03-10 04:13:13] 2026-03-10 03:12:09,589 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/9/workernode_map.json
[2026-03-10 04:13:13] 2026-03-10 03:12:09,589 | INFO     | this job has now completed (state=finished)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,589 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,589 | INFO     | log transfer has been attempted: DONE
[2026-03-10 04:13:13] 2026-03-10 03:12:09,590 | INFO     | job 7040452433 has finished - writing final server update
[2026-03-10 04:13:13] 2026-03-10 03:12:09,590 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4160623/.job.ad'
[2026-03-10 04:13:13] 2026-03-10 03:12:09,590 | INFO     | total number of processed events: 400 (read)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,607 | INFO     | using path: /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040452433/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,608 | INFO     | extracted standard info from prmon json
[2026-03-10 04:13:13] 2026-03-10 03:12:09,608 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 04:13:13] 2026-03-10 03:12:09,608 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 04:13:13] 2026-03-10 03:12:09,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 04:13:13] 2026-03-10 03:12:09,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 04:13:13] 2026-03-10 03:12:09,609 | INFO     | fitting pss+swap vs Time
[2026-03-10 04:13:13] 2026-03-10 03:12:09,609 | INFO     | sum of square deviations: 106336877.5
[2026-03-10 04:13:13] 2026-03-10 03:12:09,609 | INFO     | sum of deviations: 224873328.00000003
[2026-03-10 04:13:13] 2026-03-10 03:12:09,609 | INFO     | mean x: 1773110069.5
[2026-03-10 04:13:13] 2026-03-10 03:12:09,609 | INFO     | mean y: 2328040.2285714285
[2026-03-10 04:13:13] 2026-03-10 03:12:09,609 | INFO     | intersect: -3747313397.557453
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | chi2: 0.00012892087007259089
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | current memory leak: 2.11 B/s (using 70 data points, chi2=0.00)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | could have reported an average CPU frequency of 3602 MHz (6 samples)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | ..............................
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . Timing measurements:
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . get job = 0 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . initial setup = 4 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . payload setup = 4 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . stage-in = 0 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . payload execution = 4668 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . stage-out = 0 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | . log creation = 0 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,610 | INFO     | ..............................
[2026-03-10 04:13:13] 2026-03-10 03:12:09,659 | INFO     | 
[2026-03-10 04:13:13] 2026-03-10 03:12:09,659 | INFO     | job summary report
[2026-03-10 04:13:13] 2026-03-10 03:12:09,659 | INFO     | --------------------------------------------------
[2026-03-10 04:13:13] 2026-03-10 03:12:09,659 | INFO     | PanDA job id: 7040452433
[2026-03-10 04:13:13] 2026-03-10 03:12:09,659 | INFO     | task id: 48955006
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | errors: (none)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | pilot state: finished 
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | transexitcode: 0
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | exeerrorcode: 0
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | exeerrordiag: 
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | exitcode: 0
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | exitmsg: OK
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | cpuconsumptiontime: 17960 s
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | nevents: 400
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | neventsw: 0
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | pid: 3058452
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | pgrp: 3058452
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | corecount: 4
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | event service: False
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | sizes: {0: 2279752, 1: 2280269, 11: 2280269, 4677: 2306554, 4678: 2315768}
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | --------------------------------------------------
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | 
[2026-03-10 04:13:13] 2026-03-10 03:12:09,660 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/9
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 04:13:13] 2026-03-10 03:12:09,676 | INFO     | job 7040452433 has completed (purged errors)
[2026-03-10 04:13:13] 2026-03-10 03:12:09,677 | INFO     | overall cleanup function is called
[2026-03-10 04:13:13] 2026-03-10 03:12:10,682 | INFO     | --- collectZombieJob: --- 10, [3058452]
[2026-03-10 04:13:13] 2026-03-10 03:12:10,683 | INFO     | zombie collector waiting for pid 3058452
[2026-03-10 04:13:13] 2026-03-10 03:12:10,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 04:13:13] 2026-03-10 03:12:10,683 | INFO     | collected zombie processes
[2026-03-10 04:13:13] 2026-03-10 03:12:10,683 | INFO     | will attempt to kill all subprocesses of pid=3058452
[2026-03-10 04:13:13] 2026-03-10 03:12:11,102 | INFO     | process IDs to be killed: [3058452] (in reverse order)
[2026-03-10 04:13:13] 2026-03-10 03:12:11,321 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 04:13:13] 2026-03-10 03:12:11,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 04:13:13] 2026-03-10 03:12:11,347 | INFO     | did not find any defunct processes belonging to 3058452
[2026-03-10 04:13:13] 2026-03-10 03:12:11,369 | INFO     | did not find any defunct processes belonging to 3058452
[2026-03-10 04:13:13] 2026-03-10 03:12:11,369 | INFO     | ready for new job
[2026-03-10 04:13:13] 2026-03-10 03:12:11,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 04:13:13] 2026-03-10 03:12:11,370 | INFO     | **************************************
[2026-03-10 04:13:13] 2026-03-10 03:12:11,370 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 04:13:13] 2026-03-10 03:12:11,371 | INFO     | **************************************
[2026-03-10 04:13:13] 2026-03-10 03:12:11,371 | INFO     | 
[2026-03-10 04:13:13] 2026-03-10 03:12:11,374 | INFO     | architecture information:
[2026-03-10 04:13:13] 2026-03-10 03:12:11,375 | INFO     | executing command: cat /etc/os-release
[2026-03-10 04:13:13] 2026-03-10 03:12:11,386 | INFO     | cat /etc/os-release:
[2026-03-10 04:13:13] NAME="CentOS Linux"
[2026-03-10 04:13:13] VERSION="7 (Core)"
[2026-03-10 04:13:13] ID="centos"
[2026-03-10 04:13:13] ID_LIKE="rhel fedora"
[2026-03-10 04:13:13] VERSION_ID="7"
[2026-03-10 04:13:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 04:13:13] ANSI_COLOR="0;31"
[2026-03-10 04:13:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 04:13:13] HOME_URL="https://www.centos.org/"
[2026-03-10 04:13:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 04:13:13] 
[2026-03-10 04:13:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 04:13:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 04:13:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 04:13:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 04:13:13] 
[2026-03-10 04:13:13] 2026-03-10 03:12:11,386 | INFO     | **************************************
[2026-03-10 04:13:13] 2026-03-10 03:12:11,890 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/9
[2026-03-10 04:13:13] 2026-03-10 03:12:11,906 | INFO     | sufficient remaining disk space (21016608768 B)
[2026-03-10 04:13:13] 2026-03-10 03:12:11,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 04:13:13] 2026-03-10 03:12:11,906 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 04:13:13] 2026-03-10 03:12:11,906 | INFO     | update_server=False
[2026-03-10 04:13:13] 2026-03-10 03:12:11,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 04:13:13] 2026-03-10 03:12:11,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 04:13:13] 2026-03-10 03:12:12,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 04:13:13] 2026-03-10 03:12:12,093 | INFO     | all data control threads have been joined
[2026-03-10 04:13:13] 2026-03-10 03:12:12,148 | INFO     | all job control threads have been joined
[2026-03-10 04:13:13] 2026-03-10 03:12:12,392 | INFO     | all payload control threads have been joined
[2026-03-10 04:13:13] 2026-03-10 03:12:12,911 | INFO     | [job] retrieve thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,099 | INFO     | [data] control thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,153 | INFO     | [job] control thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,398 | INFO     | [payload] control thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,614 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,683 | INFO     | [job] validate thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,782 | INFO     | [data] copytool_in thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,812 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,812 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:13,839 | INFO     | [payload] failed_post thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:14,078 | INFO     | [data] copytool_out thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:14,359 | INFO     | [payload] validate_post thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:14,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:13:13] 2026-03-10 03:12:15,135 | WARNING  | process 3058452 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 04:13:13] 2026-03-10 03:12:15,411 | INFO     | using path: /var/lib/boinc/var/slot52/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:13:13] 2026-03-10 03:12:15,674 | INFO     | [job] queue monitor thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:15,827 | INFO     | number of running child processes to parent process 3058452: 1
[2026-03-10 04:13:13] 2026-03-10 03:12:15,827 | INFO     | maximum number of monitored processes: 6
[2026-03-10 04:13:13] 2026-03-10 03:12:15,827 | INFO     | aborting job monitoring since job object (job id=7040452433) has expired
[2026-03-10 04:13:13] 2026-03-10 03:12:15,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:13:13] 2026-03-10 03:12:15,827 | INFO     | will abort loop
[2026-03-10 04:13:13] 2026-03-10 03:12:15,913 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:16,832 | INFO     | [job] job monitor thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:22,212 | INFO     | job.realtimelogging is not enabled
[2026-03-10 04:13:13] 2026-03-10 03:12:23,218 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 04:13:13] 2026-03-10 03:12:41,588 | INFO     | PID=3052688 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 04:13:13] 2026-03-10 03:12:41,588 | INFO     | .. there are 63 such processes running
[2026-03-10 04:13:13] 2026-03-10 03:12:41,588 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 04:13:13] 2026-03-10 03:12:41,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 04:13:13] 2026-03-10 03:12:41,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 04:13:13] 2026-03-10 03:13:08,010 | INFO     | [monitor] cgroup control has ended
[2026-03-10 04:13:13] 2026-03-10 03:13:08,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23353199277888)>', '<ExcThread(monitor, started 23352959051520)>']
[2026-03-10 04:13:13] 2026-03-10 03:13:08,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 04:13:13] 2026-03-10 03:13:08,721 | INFO     | [monitor] control thread has ended
[2026-03-10 04:13:13] 2026-03-10 03:13:13,394 | INFO     | all workflow threads have been joined
[2026-03-10 04:13:13] 2026-03-10 03:13:13,394 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 04:13:13] 2026-03-10 03:13:13,394 | INFO     | traces error code: 0
[2026-03-10 04:13:13] 2026-03-10 03:13:13,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 04:13:13] 2026-03-10 03:13:13,572 [wrapper] ==== pilot stdout END ====
[2026-03-10 04:13:13] 2026-03-10 03:13:13,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 04:13:13] 2026-03-10 03:13:13,578 [wrapper] pilotpid: 3052688
[2026-03-10 04:13:13] 2026-03-10 03:13:13,580 [wrapper] Pilot exit status: 0
[2026-03-10 04:13:13] 2026-03-10 03:13:13,587 [wrapper] pandaids: 7040452433
[2026-03-10 04:13:13] 2026-03-10 03:13:13,695 [wrapper] cleanup supervisor_pilot 3899312 3052689
[2026-03-10 04:13:13] 2026-03-10 03:13:13,698 [wrapper] Test setup, not cleaning
[2026-03-10 04:13:13] 2026-03-10 03:13:13,701 [wrapper] apfmon messages muted
[2026-03-10 04:13:13] 2026-03-10 03:13:13,703 [wrapper] ==== wrapper stdout END ====
[2026-03-10 04:13:13] 2026-03-10 03:13:13,706 [wrapper] ==== wrapper stderr END ====
[2026-03-10 04:13:13]  *** Error codes and diagnostics ***
[2026-03-10 04:13:13]     "exeErrorCode": 0,
[2026-03-10 04:13:13]     "exeErrorDiag": "",
[2026-03-10 04:13:13]     "pilotErrorCode": 0,
[2026-03-10 04:13:13]     "pilotErrorDiag": "",
[2026-03-10 04:13:13]  *** Listing of results directory ***
[2026-03-10 04:13:13] total 607620
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-10 04:13:13] -rwx------. 1 boinc boinc     36322 Mar  9 05:16 runpilot2-wrapper.sh
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc      5111 Mar  9 05:17 queuedata.json
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 04:13:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:53 run_atlas
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:53 job.xml
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc      6707 Mar 10 02:53 init_data.xml
[2026-03-10 04:13:13] -rw-r--r--. 2 boinc boinc 436110259 Mar 10 02:53 EVNT.46701403._000639.pool.root.1
[2026-03-10 04:13:13] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:53 start_atlas.sh
[2026-03-10 04:13:13] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:53 shared
[2026-03-10 04:13:13] -rw-r--r--. 2 boinc boinc    597957 Mar 10 02:53 input.tar.gz
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:53 boinc_lockfile
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc      2564 Mar 10 02:53 pandaJob.out
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc   1002338 Mar 10 02:53 agis_schedconf.cvmfs.json
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc   1511578 Mar 10 02:53 agis_ddmendpoints.agis.ALL.json
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc       444 Mar 10 02:53 workernode_map.json
[2026-03-10 04:13:13] drwx------. 5 boinc boinc      4096 Mar 10 02:54 pilot3
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc 180207884 Mar 10 04:11 HITS.48955006._031944.pool.root.1
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc       530 Mar 10 04:12 boinc_task_state.xml
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc      1031 Mar 10 04:12 memory_monitor_summary.json
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc    281066 Mar 10 04:12 log.48955006._031944.job.log.tgz.1
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc      6355 Mar 10 04:12 heartbeat.json
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc        95 Mar 10 04:12 pilot_heartbeat.json
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc        27 Mar 10 04:12 wrapper_checkpoint.txt
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc      8192 Mar 10 04:12 boinc_mmap_file
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc      5433 Mar 10 04:13 pilotlog.txt
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc    690768 Mar 10 04:13 log.48955006._031944.job.log.1
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc       357 Mar 10 04:13 output.list
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc       620 Mar 10 04:13 runtime_log
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc    993280 Mar 10 04:13 result.tar.gz
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc      9204 Mar 10 04:13 runtime_log.err
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc       661 Mar 10 04:13 45cKDmvDhJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuvYLDmM9GE9n.diag
[2026-03-10 04:13:13] -rw-r--r--. 1 boinc boinc     21295 Mar 10 04:13 stderr.txt
[2026-03-10 04:13:13] HITS file was successfully produced:
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc 180207884 Mar 10 04:11 shared/HITS.pool.root.1
[2026-03-10 04:13:13]  *** Contents of shared directory: ***
[2026-03-10 04:13:13] total 603460
[2026-03-10 04:13:13] -rw-r--r--. 2 boinc boinc 436110259 Mar 10 02:53 ATLAS.root_0
[2026-03-10 04:13:13] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:53 start_atlas.sh
[2026-03-10 04:13:13] -rw-r--r--. 2 boinc boinc    597957 Mar 10 02:53 input.tar.gz
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc 180207884 Mar 10 04:11 HITS.pool.root.1
[2026-03-10 04:13:13] -rw-------. 1 boinc boinc    993280 Mar 10 04:13 result.tar.gz
04:13:15 (3048176): run_atlas exited; CPU time 18139.051780
04:13:15 (3048176): called boinc_finish(0)

</stderr_txt>
]]>

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