Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:27:41 (1588617): wrapper (7.7.26015): starting
03:27:41 (1588617): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 03:27:41] Arguments: --nthreads 4
[2026-03-10 03:27:41] Threads: 4
[2026-03-10 03:27:41] Checking for CVMFS
[2026-03-10 03:27:41] No cvmfs_config command found, will try listing directly
[2026-03-10 03:27:41] CVMFS is ok
[2026-03-10 03:27:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 03:27:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 03:27:41] Further information can be found at the LHC@home message board.
[2026-03-10 03:27:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:27:41] Checking for apptainer binary...
[2026-03-10 03:27:41] which: no apptainer in ((null))
[2026-03-10 03:27:41] apptainer is not installed, using version from CVMFS
[2026-03-10 03:27:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:27:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-10 03:27:42] apptainer works
[2026-03-10 03:27:42] Set ATHENA_PROC_NUMBER=4
[2026-03-10 03:27:42] Set ATHENA_CORE_NUMBER=4
[2026-03-10 03:27:42] Starting ATLAS job with PandaID=7046661871
[2026-03-10 03:27:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 05:10:33]  *** The last 200 lines of the pilot log: ***
[2026-03-10 05:10:33]  lfn=log.48966988._020898.job.log.tgz.1
[2026-03-10 05:10:33]  mtime=0
[2026-03-10 05:10:33]  protocol_id=None
[2026-03-10 05:10:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 05:10:33]  replicas=None
[2026-03-10 05:10:33]  scope=mc23_13p6TeV
[2026-03-10 05:10:33]  status=None
[2026-03-10 05:10:33]  status_code=0
[2026-03-10 05:10:33]  storage_token=
[2026-03-10 05:10:33]  surl=/var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7046661871/log.48966988._020898.job.log.tgz.1
[2026-03-10 05:10:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/d1/log.48966988._020898.job.log.tgz.1
[2026-03-10 05:10:33]  workdir=None
[2026-03-10 05:10:33] ]
[2026-03-10 05:10:33] 2026-03-10 04:09:29,542 | INFO     | transferring file log.48966988._020898.job.log.tgz.1 from /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7046661871/log.48966988._020898.job.log.tgz.1 to /var/lib/b
[2026-03-10 05:10:33] 2026-03-10 04:09:29,542 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7046661871/log.48966988._020898.job.log.tgz.1 /var/lib/boinc/var/slot80/slots/2/lo
[2026-03-10 05:10:33] 2026-03-10 04:09:29,561 | INFO     | adding to output.list: log.48966988._020898.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/d1/log.48966988._020898.job.log.tg
[2026-03-10 05:10:33] 2026-03-10 04:09:29,561 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 05:10:33] 2026-03-10 04:09:29,562 | INFO     | summary of transferred files:
[2026-03-10 05:10:33] 2026-03-10 04:09:29,562 | INFO     |  -- lfn=log.48966988._020898.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 05:10:33] 2026-03-10 04:09:29,562 | INFO     | stage-out finished correctly
[2026-03-10 05:10:33] 2026-03-10 04:09:29,905 | INFO     | time since job start (6071s) is within the limit (349056.0s)
[2026-03-10 05:10:33] 2026-03-10 04:09:30,028 | WARNING  | process 1599209 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 05:10:33] 2026-03-10 04:09:30,028 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7046661871/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:10:33] 2026-03-10 04:09:30,429 | INFO     | number of running child processes to parent process 1599209: 1
[2026-03-10 05:10:33] 2026-03-10 04:09:30,429 | INFO     | maximum number of monitored processes: 6
[2026-03-10 05:10:33] 2026-03-10 04:09:30,695 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 05:10:33] 2026-03-10 04:09:31,910 | INFO     | time since job start (6073s) is within the limit (349056.0s)
[2026-03-10 05:10:33] 2026-03-10 04:09:32,932 | INFO     | monitor loop #440: job 0:7046661871 is in state 'finished'
[2026-03-10 05:10:33] 2026-03-10 04:09:32,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,534 | INFO     | job 7046661871 has state=finished
[2026-03-10 05:10:33] 2026-03-10 04:09:33,534 | INFO     | preparing for final server update for job 7046661871 in state='finished'
[2026-03-10 05:10:33] 2026-03-10 04:09:33,534 | INFO     | reading metadata from: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7046661871/jobReport.json
[2026-03-10 05:10:33] 2026-03-10 04:09:33,535 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/2/workernode_map.json
[2026-03-10 05:10:33] 2026-03-10 04:09:33,536 | INFO     | this job has now completed (state=finished)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,536 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,536 | INFO     | log transfer has been attempted: DONE
[2026-03-10 05:10:33] 2026-03-10 04:09:33,536 | INFO     | job 7046661871 has finished - writing final server update
[2026-03-10 05:10:33] 2026-03-10 04:09:33,536 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_842678/.job.ad'
[2026-03-10 05:10:33] 2026-03-10 04:09:33,536 | INFO     | total number of processed events: 400 (read)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,554 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7046661871/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,555 | INFO     | extracted standard info from prmon json
[2026-03-10 05:10:33] 2026-03-10 04:09:33,555 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 05:10:33] 2026-03-10 04:09:33,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 05:10:33] 2026-03-10 04:09:33,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 05:10:33] 2026-03-10 04:09:33,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 05:10:33] 2026-03-10 04:09:33,556 | INFO     | fitting pss+swap vs Time
[2026-03-10 05:10:33] 2026-03-10 04:09:33,556 | INFO     | sum of square deviations: 241429643.0
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | sum of deviations: 459563142.0
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | mean x: 1773112809.5
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | mean y: 2322442.913043478
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | intersect: -3372811131.112361
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | chi2: 0.000335071381034076
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | current memory leak: 1.90 B/s (using 92 data points, chi2=0.00)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | could have reported an average CPU frequency of 3522 MHz (7 samples)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | ..............................
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . Timing measurements:
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . get job = 0 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . initial setup = 13 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . payload setup = 9 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . stage-in = 0 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . payload execution = 6047 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . stage-out = 0 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | . log creation = 0 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,557 | INFO     | ..............................
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | 
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | job summary report
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | --------------------------------------------------
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | PanDA job id: 7046661871
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | task id: 48966988
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | errors: (none)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | pilot state: finished 
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | transexitcode: 0
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | exeerrorcode: 0
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | exeerrordiag: 
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | exitcode: 0
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | exitmsg: OK
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | cpuconsumptiontime: 23306 s
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | nevents: 400
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | neventsw: 0
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | pid: 1599209
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | pgrp: 1599209
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | corecount: 4
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | event service: False
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | sizes: {0: 2280282, 11: 2280282, 6060: 2316119, 6061: 2316119, 6064: 2316313}
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | --------------------------------------------------
[2026-03-10 05:10:33] 2026-03-10 04:09:33,662 | INFO     | 
[2026-03-10 05:10:33] 2026-03-10 04:09:33,663 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/2
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | job 7046661871 has completed (purged errors)
[2026-03-10 05:10:33] 2026-03-10 04:09:33,681 | INFO     | overall cleanup function is called
[2026-03-10 05:10:33] 2026-03-10 04:09:34,688 | INFO     | --- collectZombieJob: --- 10, [1599209]
[2026-03-10 05:10:33] 2026-03-10 04:09:34,688 | INFO     | zombie collector waiting for pid 1599209
[2026-03-10 05:10:33] 2026-03-10 04:09:34,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 05:10:33] 2026-03-10 04:09:34,688 | INFO     | collected zombie processes
[2026-03-10 05:10:33] 2026-03-10 04:09:34,688 | INFO     | will attempt to kill all subprocesses of pid=1599209
[2026-03-10 05:10:33] 2026-03-10 04:09:35,112 | INFO     | process IDs to be killed: [1599209] (in reverse order)
[2026-03-10 05:10:33] 2026-03-10 04:09:35,327 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 05:10:33] 2026-03-10 04:09:35,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 05:10:33] 2026-03-10 04:09:35,351 | INFO     | did not find any defunct processes belonging to 1599209
[2026-03-10 05:10:33] 2026-03-10 04:09:35,375 | INFO     | did not find any defunct processes belonging to 1599209
[2026-03-10 05:10:33] 2026-03-10 04:09:35,375 | INFO     | ready for new job
[2026-03-10 05:10:33] 2026-03-10 04:09:35,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 05:10:33] 2026-03-10 04:09:35,377 | INFO     | **************************************
[2026-03-10 05:10:33] 2026-03-10 04:09:35,377 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 05:10:33] 2026-03-10 04:09:35,377 | INFO     | **************************************
[2026-03-10 05:10:33] 2026-03-10 04:09:35,377 | INFO     | 
[2026-03-10 05:10:33] 2026-03-10 04:09:35,382 | INFO     | architecture information:
[2026-03-10 05:10:33] 2026-03-10 04:09:35,383 | INFO     | executing command: cat /etc/os-release
[2026-03-10 05:10:33] 2026-03-10 04:09:35,394 | INFO     | cat /etc/os-release:
[2026-03-10 05:10:33] NAME="CentOS Linux"
[2026-03-10 05:10:33] VERSION="7 (Core)"
[2026-03-10 05:10:33] ID="centos"
[2026-03-10 05:10:33] ID_LIKE="rhel fedora"
[2026-03-10 05:10:33] VERSION_ID="7"
[2026-03-10 05:10:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 05:10:33] ANSI_COLOR="0;31"
[2026-03-10 05:10:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 05:10:33] HOME_URL="https://www.centos.org/"
[2026-03-10 05:10:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 05:10:33] 
[2026-03-10 05:10:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 05:10:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 05:10:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 05:10:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 05:10:33] 
[2026-03-10 05:10:33] 2026-03-10 04:09:35,394 | INFO     | **************************************
[2026-03-10 05:10:33] 2026-03-10 04:09:35,897 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/2
[2026-03-10 05:10:33] 2026-03-10 04:09:35,911 | INFO     | sufficient remaining disk space (20433600512 B)
[2026-03-10 05:10:33] 2026-03-10 04:09:35,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 05:10:33] 2026-03-10 04:09:35,911 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 05:10:33] 2026-03-10 04:09:35,911 | INFO     | update_server=False
[2026-03-10 05:10:33] 2026-03-10 04:09:35,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 05:10:33] 2026-03-10 04:09:35,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 05:10:33] 2026-03-10 04:09:36,213 | INFO     | all job control threads have been joined
[2026-03-10 05:10:33] 2026-03-10 04:09:36,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:10:33] 2026-03-10 04:09:36,441 | INFO     | aborting loop
[2026-03-10 05:10:33] 2026-03-10 04:09:36,506 | INFO     | all data control threads have been joined
[2026-03-10 05:10:33] 2026-03-10 04:09:36,507 | INFO     | all payload control threads have been joined
[2026-03-10 05:10:33] 2026-03-10 04:09:36,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 05:10:33] 2026-03-10 04:09:36,917 | INFO     | [job] retrieve thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,218 | INFO     | [job] control thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,446 | INFO     | [job] job monitor thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,511 | INFO     | [data] control thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,512 | INFO     | [payload] control thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,551 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,557 | INFO     | [job] validate thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,690 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,917 | INFO     | [data] copytool_out thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:37,987 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:38,101 | INFO     | [payload] validate_post thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:38,326 | INFO     | [data] copytool_in thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:38,493 | INFO     | [payload] failed_post thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:38,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:10:33] 2026-03-10 04:09:39,621 | INFO     | [job] queue monitor thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:40,751 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:09:46,903 | INFO     | job.realtimelogging is not enabled
[2026-03-10 05:10:33] 2026-03-10 04:09:47,908 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 05:10:33] 2026-03-10 04:10:05,478 | INFO     | PID=1593291 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 05:10:33] 2026-03-10 04:10:05,478 | INFO     | .. there are 62 such processes running
[2026-03-10 05:10:33] 2026-03-10 04:10:05,478 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 05:10:33] 2026-03-10 04:10:05,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 05:10:33] 2026-03-10 04:10:05,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 05:10:33] 2026-03-10 04:10:27,815 | INFO     | [monitor] cgroup control has ended
[2026-03-10 05:10:33] 2026-03-10 04:10:28,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23422898259776)>', '<ExcThread(monitor, started 23422651594496)>']
[2026-03-10 05:10:33] 2026-03-10 04:10:28,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 05:10:33] 2026-03-10 04:10:28,592 | INFO     | [monitor] control thread has ended
[2026-03-10 05:10:33] 2026-03-10 04:10:33,178 | INFO     | all workflow threads have been joined
[2026-03-10 05:10:33] 2026-03-10 04:10:33,178 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 05:10:33] 2026-03-10 04:10:33,178 | INFO     | traces error code: 0
[2026-03-10 05:10:33] 2026-03-10 04:10:33,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 05:10:33] 2026-03-10 04:10:33,303 [wrapper] ==== pilot stdout END ====
[2026-03-10 05:10:33] 2026-03-10 04:10:33,304 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 05:10:33] 2026-03-10 04:10:33,306 [wrapper] pilotpid: 1593291
[2026-03-10 05:10:33] 2026-03-10 04:10:33,307 [wrapper] Pilot exit status: 0
[2026-03-10 05:10:33] 2026-03-10 04:10:33,313 [wrapper] pandaids: 7046661871
[2026-03-10 05:10:33] 2026-03-10 04:10:33,421 [wrapper] cleanup supervisor_pilot 2677424 1593292
[2026-03-10 05:10:33] 2026-03-10 04:10:33,424 [wrapper] Test setup, not cleaning
[2026-03-10 05:10:33] 2026-03-10 04:10:33,426 [wrapper] apfmon messages muted
[2026-03-10 05:10:33] 2026-03-10 04:10:33,428 [wrapper] ==== wrapper stdout END ====
[2026-03-10 05:10:33] 2026-03-10 04:10:33,430 [wrapper] ==== wrapper stderr END ====
[2026-03-10 05:10:33]  *** Error codes and diagnostics ***
[2026-03-10 05:10:33]     "exeErrorCode": 0,
[2026-03-10 05:10:33]     "exeErrorDiag": "",
[2026-03-10 05:10:33]     "pilotErrorCode": 0,
[2026-03-10 05:10:33]     "pilotErrorDiag": "",
[2026-03-10 05:10:33]  *** Listing of results directory ***
[2026-03-10 05:10:33] total 410324
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc      5111 Mar  9 00:43 queuedata.json
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc    584627 Mar  9 00:43 pilot3.tar.gz
[2026-03-10 05:10:33] -rwx------. 1 boinc boinc     36322 Mar  9 00:43 runpilot2-wrapper.sh
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 05:10:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:27 run_atlas
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:27 job.xml
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc      6706 Mar 10 03:27 init_data.xml
[2026-03-10 05:10:33] -rw-r--r--. 2 boinc boinc 212715212 Mar 10 03:27 EVNT.48966985._000817.pool.root.1
[2026-03-10 05:10:33] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:27 start_atlas.sh
[2026-03-10 05:10:33] drwxrwx--x. 2 boinc boinc      4096 Mar 10 03:27 shared
[2026-03-10 05:10:33] -rw-r--r--. 2 boinc boinc    597960 Mar 10 03:27 input.tar.gz
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:27 boinc_lockfile
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc      2592 Mar 10 03:27 pandaJob.out
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc   1002338 Mar 10 03:28 agis_schedconf.cvmfs.json
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc   1511578 Mar 10 03:28 agis_ddmendpoints.agis.ALL.json
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc       444 Mar 10 03:28 workernode_map.json
[2026-03-10 05:10:33] drwx------. 5 boinc boinc      4096 Mar 10 03:28 pilot3
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc 201164015 Mar 10 05:09 HITS.48966988._020898.pool.root.1
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc       529 Mar 10 05:09 boinc_task_state.xml
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc        95 Mar 10 05:09 pilot_heartbeat.json
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc      1031 Mar 10 05:09 memory_monitor_summary.json
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc    298632 Mar 10 05:09 log.48966988._020898.job.log.tgz.1
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc      6355 Mar 10 05:09 heartbeat.json
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc      8192 Mar 10 05:10 boinc_mmap_file
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc        27 Mar 10 05:10 wrapper_checkpoint.txt
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc      4901 Mar 10 05:10 pilotlog.txt
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc    877678 Mar 10 05:10 log.48966988._020898.job.log.1
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc       357 Mar 10 05:10 output.list
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc       620 Mar 10 05:10 runtime_log
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc   1198080 Mar 10 05:10 result.tar.gz
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc      9204 Mar 10 05:10 runtime_log.err
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc       663 Mar 10 05:10 2u5KDm0xcJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmviaLDm8w3Ain.diag
[2026-03-10 05:10:33] -rw-r--r--. 1 boinc boinc     21521 Mar 10 05:10 stderr.txt
[2026-03-10 05:10:33] HITS file was successfully produced:
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc 201164015 Mar 10 05:09 shared/HITS.pool.root.1
[2026-03-10 05:10:33]  *** Contents of shared directory: ***
[2026-03-10 05:10:33] total 405964
[2026-03-10 05:10:33] -rw-r--r--. 2 boinc boinc 212715212 Mar 10 03:27 ATLAS.root_0
[2026-03-10 05:10:33] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:27 start_atlas.sh
[2026-03-10 05:10:33] -rw-r--r--. 2 boinc boinc    597960 Mar 10 03:27 input.tar.gz
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc 201164015 Mar 10 05:09 HITS.pool.root.1
[2026-03-10 05:10:33] -rw-------. 1 boinc boinc   1198080 Mar 10 05:10 result.tar.gz
05:10:35 (1588617): run_atlas exited; CPU time 23550.156059
05:10:35 (1588617): called boinc_finish(0)

</stderr_txt>
]]>

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