Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:17:03 (1776492): wrapper (7.7.26015): starting
08:17:03 (1776492): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 08:17:03] Arguments: --nthreads 4
[2026-03-10 08:17:03] Threads: 4
[2026-03-10 08:17:03] Checking for CVMFS
[2026-03-10 08:17:03] No cvmfs_config command found, will try listing directly
[2026-03-10 08:17:03] CVMFS is ok
[2026-03-10 08:17:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 08:17:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 08:17:03] Further information can be found at the LHC@home message board.
[2026-03-10 08:17:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 08:17:03] Checking for apptainer binary...
[2026-03-10 08:17:03] which: no apptainer in ((null))
[2026-03-10 08:17:03] apptainer is not installed, using version from CVMFS
[2026-03-10 08:17:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 08:17:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot188/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-10 08:17:03] apptainer works
[2026-03-10 08:17:03] Set ATHENA_PROC_NUMBER=4
[2026-03-10 08:17:03] Set ATHENA_CORE_NUMBER=4
[2026-03-10 08:17:03] Starting ATLAS job with PandaID=7040415217
[2026-03-10 08:17:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot188/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 09:32:28]  *** The last 200 lines of the pilot log: ***
[2026-03-10 09:32:28]  is_altstaged=None
[2026-03-10 09:32:28]  is_tar=False
[2026-03-10 09:32:28]  lfn=log.48955010._016009.job.log.tgz.1
[2026-03-10 09:32:28]  mtime=0
[2026-03-10 09:32:28]  protocol_id=None
[2026-03-10 09:32:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 09:32:28]  replicas=None
[2026-03-10 09:32:28]  scope=mc23_13p6TeV
[2026-03-10 09:32:28]  status=None
[2026-03-10 09:32:28]  status_code=0
[2026-03-10 09:32:28]  storage_token=
[2026-03-10 09:32:28]  surl=/var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040415217/log.48955010._016009.job.log.tgz.1
[2026-03-10 09:32:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/b0/log.48955010._016009.job.log.tgz.1
[2026-03-10 09:32:28]  workdir=None
[2026-03-10 09:32:28] ]
[2026-03-10 09:32:28] 2026-03-10 08:31:34,634 | INFO     | transferring file log.48955010._016009.job.log.tgz.1 from /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040415217/log.48955010._016009.job.log.tgz.1 to /var/lib/
[2026-03-10 09:32:28] 2026-03-10 08:31:34,634 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040415217/log.48955010._016009.job.log.tgz.1 /var/lib/boinc/var/slot188/slots/0/
[2026-03-10 09:32:28] 2026-03-10 08:31:34,653 | INFO     | adding to output.list: log.48955010._016009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/b0/log.48955010._016009.job.log.tg
[2026-03-10 09:32:28] 2026-03-10 08:31:34,653 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 09:32:28] 2026-03-10 08:31:34,653 | INFO     | summary of transferred files:
[2026-03-10 09:32:28] 2026-03-10 08:31:34,653 | INFO     |  -- lfn=log.48955010._016009.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 09:32:28] 2026-03-10 08:31:34,653 | INFO     | stage-out finished correctly
[2026-03-10 09:32:28] 2026-03-10 08:31:34,838 | INFO     | time since job start (4460s) is within the limit (349056.0s)
[2026-03-10 09:32:28] 2026-03-10 08:31:35,981 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 09:32:28] 2026-03-10 08:31:36,096 | INFO     | job 7040415217 has state=finished
[2026-03-10 09:32:28] 2026-03-10 08:31:36,096 | INFO     | preparing for final server update for job 7040415217 in state='finished'
[2026-03-10 09:32:28] 2026-03-10 08:31:36,097 | INFO     | reading metadata from: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040415217/jobReport.json
[2026-03-10 09:32:28] 2026-03-10 08:31:36,098 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot188/slots/0/workernode_map.json
[2026-03-10 09:32:28] 2026-03-10 08:31:36,098 | INFO     | this job has now completed (state=finished)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,098 | INFO     | log transfer has been attempted: DONE
[2026-03-10 09:32:28] 2026-03-10 08:31:36,098 | INFO     | job 7040415217 has finished - writing final server update
[2026-03-10 09:32:28] 2026-03-10 08:31:36,098 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1894257/.job.ad'
[2026-03-10 09:32:28] 2026-03-10 08:31:36,098 | INFO     | total number of processed events: 400 (read)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,115 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7040415217/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,116 | INFO     | extracted standard info from prmon json
[2026-03-10 09:32:28] 2026-03-10 08:31:36,116 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 09:32:28] 2026-03-10 08:31:36,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 09:32:28] 2026-03-10 08:31:36,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 09:32:28] 2026-03-10 08:31:36,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 09:32:28] 2026-03-10 08:31:36,117 | INFO     | fitting pss+swap vs Time
[2026-03-10 09:32:28] 2026-03-10 08:31:36,117 | INFO     | sum of square deviations: 89127252.5
[2026-03-10 09:32:28] 2026-03-10 08:31:36,117 | INFO     | sum of deviations: -451226119.50000006
[2026-03-10 09:32:28] 2026-03-10 08:31:36,117 | INFO     | mean x: 1773129342.5
[2026-03-10 09:32:28] 2026-03-10 08:31:36,117 | INFO     | mean y: 2342272.106060606
[2026-03-10 09:32:28] 2026-03-10 08:31:36,117 | INFO     | intersect: 8979195593.01216
[2026-03-10 09:32:28] 2026-03-10 08:31:36,117 | INFO     | chi2: 0.0001429505346060607
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | current memory leak: -5.06 B/s (using 66 data points, chi2=0.00)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | could have reported an average CPU frequency of 3601 MHz (6 samples)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | ..............................
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . Timing measurements:
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . get job = 0 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . initial setup = 4 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . payload setup = 4 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . stage-in = 0 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . payload execution = 4439 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . stage-out = 0 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | . log creation = 0 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,118 | INFO     | ..............................
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | 
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | job summary report
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | --------------------------------------------------
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | PanDA job id: 7040415217
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | task id: 48955010
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | errors: (none)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | pilot state: finished 
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | transexitcode: 0
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | exeerrorcode: 0
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | exeerrordiag: 
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | exitcode: 0
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | exitmsg: OK
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | cpuconsumptiontime: 16920 s
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | nevents: 400
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | neventsw: 0
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | pid: 1789673
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | pgrp: 1789673
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | corecount: 4
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | event service: False
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | sizes: {0: 2280191, 10: 2280191, 4448: 2306365, 4449: 2315387, 4451: 2315637}
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | --------------------------------------------------
[2026-03-10 09:32:28] 2026-03-10 08:31:36,163 | INFO     | 
[2026-03-10 09:32:28] 2026-03-10 08:31:36,164 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot188/slots/0
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | job 7040415217 has completed (purged errors)
[2026-03-10 09:32:28] 2026-03-10 08:31:36,181 | INFO     | overall cleanup function is called
[2026-03-10 09:32:28] 2026-03-10 08:31:37,188 | INFO     | --- collectZombieJob: --- 10, [1789673]
[2026-03-10 09:32:28] 2026-03-10 08:31:37,188 | INFO     | zombie collector waiting for pid 1789673
[2026-03-10 09:32:28] 2026-03-10 08:31:37,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 09:32:28] 2026-03-10 08:31:37,188 | INFO     | collected zombie processes
[2026-03-10 09:32:28] 2026-03-10 08:31:37,188 | INFO     | will attempt to kill all subprocesses of pid=1789673
[2026-03-10 09:32:28] 2026-03-10 08:31:37,586 | INFO     | process IDs to be killed: [1789673] (in reverse order)
[2026-03-10 09:32:28] 2026-03-10 08:31:37,782 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 09:32:28] 2026-03-10 08:31:37,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 09:32:28] 2026-03-10 08:31:37,807 | INFO     | did not find any defunct processes belonging to 1789673
[2026-03-10 09:32:28] 2026-03-10 08:31:37,829 | INFO     | did not find any defunct processes belonging to 1789673
[2026-03-10 09:32:28] 2026-03-10 08:31:37,829 | INFO     | ready for new job
[2026-03-10 09:32:28] 2026-03-10 08:31:37,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 09:32:28] 2026-03-10 08:31:37,831 | INFO     | **************************************
[2026-03-10 09:32:28] 2026-03-10 08:31:37,831 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 09:32:28] 2026-03-10 08:31:37,831 | INFO     | **************************************
[2026-03-10 09:32:28] 2026-03-10 08:31:37,831 | INFO     | 
[2026-03-10 09:32:28] 2026-03-10 08:31:37,836 | INFO     | architecture information:
[2026-03-10 09:32:28] 2026-03-10 08:31:37,836 | INFO     | executing command: cat /etc/os-release
[2026-03-10 09:32:28] 2026-03-10 08:31:37,851 | INFO     | cat /etc/os-release:
[2026-03-10 09:32:28] NAME="CentOS Linux"
[2026-03-10 09:32:28] VERSION="7 (Core)"
[2026-03-10 09:32:28] ID="centos"
[2026-03-10 09:32:28] ID_LIKE="rhel fedora"
[2026-03-10 09:32:28] VERSION_ID="7"
[2026-03-10 09:32:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 09:32:28] ANSI_COLOR="0;31"
[2026-03-10 09:32:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 09:32:28] HOME_URL="https://www.centos.org/"
[2026-03-10 09:32:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 09:32:28] 
[2026-03-10 09:32:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 09:32:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 09:32:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 09:32:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 09:32:28] 
[2026-03-10 09:32:28] 2026-03-10 08:31:37,851 | INFO     | **************************************
[2026-03-10 09:32:28] 2026-03-10 08:31:38,354 | INFO     | executing command: df -mP /var/lib/boinc/var/slot188/slots/0
[2026-03-10 09:32:28] 2026-03-10 08:31:38,368 | INFO     | sufficient remaining disk space (19917701120 B)
[2026-03-10 09:32:28] 2026-03-10 08:31:38,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 09:32:28] 2026-03-10 08:31:38,369 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 09:32:28] 2026-03-10 08:31:38,369 | INFO     | update_server=False
[2026-03-10 09:32:28] 2026-03-10 08:31:38,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 09:32:28] 2026-03-10 08:31:38,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 09:32:28] 2026-03-10 08:31:38,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 09:32:28] 2026-03-10 08:31:38,712 | INFO     | all payload control threads have been joined
[2026-03-10 09:32:28] 2026-03-10 08:31:38,804 | WARNING  | process 1789673 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 09:32:28] 2026-03-10 08:31:39,074 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:32:28] 2026-03-10 08:31:39,351 | INFO     | all data control threads have been joined
[2026-03-10 09:32:28] 2026-03-10 08:31:39,367 | INFO     | all job control threads have been joined
[2026-03-10 09:32:28] 2026-03-10 08:31:39,374 | INFO     | [job] retrieve thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:39,454 | INFO     | [job] validate thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:39,472 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:39,475 | INFO     | number of running child processes to parent process 1789673: 1
[2026-03-10 09:32:28] 2026-03-10 08:31:39,475 | INFO     | maximum number of monitored processes: 6
[2026-03-10 09:32:28] 2026-03-10 08:31:39,476 | INFO     | aborting job monitoring since job object (job id=7040415217) has expired
[2026-03-10 09:32:28] 2026-03-10 08:31:39,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:32:28] 2026-03-10 08:31:39,476 | INFO     | will abort loop
[2026-03-10 09:32:28] 2026-03-10 08:31:39,554 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:39,555 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:39,717 | INFO     | [payload] control thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:39,737 | INFO     | [payload] failed_post thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:39,922 | INFO     | [data] copytool_in thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:40,204 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:40,356 | INFO     | [data] control thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:40,370 | INFO     | [data] copytool_out thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:40,372 | INFO     | [job] control thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:40,481 | INFO     | [job] job monitor thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:40,643 | INFO     | [payload] validate_post thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:41,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:32:28] 2026-03-10 08:31:42,178 | INFO     | [job] queue monitor thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:31:42,375 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 09:32:28] 2026-03-10 08:32:08,243 | INFO     | PID=1781140 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 09:32:28] 2026-03-10 08:32:08,243 | INFO     | .. there are 54 such processes running
[2026-03-10 09:32:28] 2026-03-10 08:32:08,243 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 09:32:28] 2026-03-10 08:32:08,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 09:32:28] 2026-03-10 08:32:08,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 09:32:28] 2026-03-10 08:32:09,670 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-10 09:32:28] 2026-03-10 08:32:21,657 | INFO     | [monitor] cgroup control has ended
[2026-03-10 09:32:28] 2026-03-10 08:32:23,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22416048285504)>', '<ExcThread(monitor, started 22415811032832)>']
[2026-03-10 09:32:28] 2026-03-10 08:32:24,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 09:32:28] 2026-03-10 08:32:24,318 | INFO     | [monitor] control thread has ended
[2026-03-10 09:32:28] 2026-03-10 08:32:28,366 | INFO     | all workflow threads have been joined
[2026-03-10 09:32:28] 2026-03-10 08:32:28,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 09:32:28] 2026-03-10 08:32:28,366 | INFO     | traces error code: 0
[2026-03-10 09:32:28] 2026-03-10 08:32:28,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 09:32:28] 2026-03-10 08:32:28,479 [wrapper] ==== pilot stdout END ====
[2026-03-10 09:32:28] 2026-03-10 08:32:28,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 09:32:28] 2026-03-10 08:32:28,482 [wrapper] pilotpid: 1781140
[2026-03-10 09:32:28] 2026-03-10 08:32:28,483 [wrapper] Pilot exit status: 0
[2026-03-10 09:32:28] 2026-03-10 08:32:28,488 [wrapper] pandaids: 7040415217
[2026-03-10 09:32:28] 2026-03-10 08:32:28,589 [wrapper] cleanup supervisor_pilot 2504810 1781141
[2026-03-10 09:32:28] 2026-03-10 08:32:28,592 [wrapper] Test setup, not cleaning
[2026-03-10 09:32:28] 2026-03-10 08:32:28,594 [wrapper] apfmon messages muted
[2026-03-10 09:32:28] 2026-03-10 08:32:28,596 [wrapper] ==== wrapper stdout END ====
[2026-03-10 09:32:28] 2026-03-10 08:32:28,599 [wrapper] ==== wrapper stderr END ====
[2026-03-10 09:32:28]  *** Error codes and diagnostics ***
[2026-03-10 09:32:28]     "exeErrorCode": 0,
[2026-03-10 09:32:28]     "exeErrorDiag": "",
[2026-03-10 09:32:28]     "pilotErrorCode": 0,
[2026-03-10 09:32:28]     "pilotErrorDiag": "",
[2026-03-10 09:32:28]  *** Listing of results directory ***
[2026-03-10 09:32:28] total 609296
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-10 09:32:28] -rwx------. 1 boinc boinc     36322 Mar  9 05:07 runpilot2-wrapper.sh
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc      5111 Mar  9 05:08 queuedata.json
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc       100 Mar 10 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 09:32:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 08:16 run_atlas
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc       105 Mar 10 08:16 job.xml
[2026-03-10 09:32:28] -rw-r--r--. 2 boinc boinc 435339268 Mar 10 08:17 EVNT.46701403._001320.pool.root.1
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc      6709 Mar 10 08:17 init_data.xml
[2026-03-10 09:32:28] -rw-r--r--. 2 boinc boinc     15845 Mar 10 08:17 start_atlas.sh
[2026-03-10 09:32:28] drwxrwx--x. 2 boinc boinc      4096 Mar 10 08:17 shared
[2026-03-10 09:32:28] -rw-r--r--. 2 boinc boinc    597957 Mar 10 08:17 input.tar.gz
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc         0 Mar 10 08:17 boinc_lockfile
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc      2563 Mar 10 08:17 pandaJob.out
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc   1005057 Mar 10 08:17 agis_schedconf.cvmfs.json
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc   1511578 Mar 10 08:17 agis_ddmendpoints.agis.ALL.json
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc       443 Mar 10 08:17 workernode_map.json
[2026-03-10 09:32:28] drwx------. 5 boinc boinc      4096 Mar 10 08:17 pilot3
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc 182751217 Mar 10 09:31 HITS.48955010._016009.pool.root.1
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc       530 Mar 10 09:31 boinc_task_state.xml
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc      1029 Mar 10 09:31 memory_monitor_summary.json
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc    285686 Mar 10 09:31 log.48955010._016009.job.log.tgz.1
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc      6354 Mar 10 09:31 heartbeat.json
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc        95 Mar 10 09:32 pilot_heartbeat.json
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc        27 Mar 10 09:32 wrapper_checkpoint.txt
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc      8192 Mar 10 09:32 boinc_mmap_file
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc      5363 Mar 10 09:32 pilotlog.txt
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc    662288 Mar 10 09:32 log.48955010._016009.job.log.1
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc       357 Mar 10 09:32 output.list
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc       620 Mar 10 09:32 runtime_log
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc    962560 Mar 10 09:32 result.tar.gz
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc      9221 Mar 10 09:32 runtime_log.err
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc       661 Mar 10 09:32 BBPKDmt4gJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqObLDmp8awim.diag
[2026-03-10 09:32:28] -rw-r--r--. 1 boinc boinc     21354 Mar 10 09:32 stderr.txt
[2026-03-10 09:32:28] HITS file was successfully produced:
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc 182751217 Mar 10 09:31 shared/HITS.pool.root.1
[2026-03-10 09:32:28]  *** Contents of shared directory: ***
[2026-03-10 09:32:28] total 605156
[2026-03-10 09:32:28] -rw-r--r--. 2 boinc boinc 435339268 Mar 10 08:17 ATLAS.root_0
[2026-03-10 09:32:28] -rw-r--r--. 2 boinc boinc     15845 Mar 10 08:17 start_atlas.sh
[2026-03-10 09:32:28] -rw-r--r--. 2 boinc boinc    597957 Mar 10 08:17 input.tar.gz
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc 182751217 Mar 10 09:31 HITS.pool.root.1
[2026-03-10 09:32:28] -rw-------. 1 boinc boinc    962560 Mar 10 09:32 result.tar.gz
09:32:30 (1776492): run_atlas exited; CPU time 17091.261046
09:32:30 (1776492): called boinc_finish(0)

</stderr_txt>
]]>

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