Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:42:20 (3526343): wrapper (7.7.26015): starting
03:42:20 (3526343): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 03:42:20] Arguments: --nthreads 4
[2026-03-10 03:42:20] Threads: 4
[2026-03-10 03:42:20] Checking for CVMFS
[2026-03-10 03:42:20] No cvmfs_config command found, will try listing directly
[2026-03-10 03:42:20] CVMFS is ok
[2026-03-10 03:42:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 03:42:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 03:42:20] Further information can be found at the LHC@home message board.
[2026-03-10 03:42:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:42:20] Checking for apptainer binary...
[2026-03-10 03:42:20] which: no apptainer in ((null))
[2026-03-10 03:42:20] apptainer is not installed, using version from CVMFS
[2026-03-10 03:42:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:42:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-10 03:42:20] apptainer works
[2026-03-10 03:42:20] Set ATHENA_PROC_NUMBER=4
[2026-03-10 03:42:20] Set ATHENA_CORE_NUMBER=4
[2026-03-10 03:42:20] Starting ATLAS job with PandaID=7040415135
[2026-03-10 03:42:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 05:03:01]  *** The last 200 lines of the pilot log: ***
[2026-03-10 05:03:01]  scope=mc23_13p6TeV
[2026-03-10 05:03:01]  status=None
[2026-03-10 05:03:01]  status_code=0
[2026-03-10 05:03:01]  storage_token=
[2026-03-10 05:03:01]  surl=/var/lib/boinc/var/slot40/slots/6/PanDA_Pilot-7040415135/log.48955010._015927.job.log.tgz.1
[2026-03-10 05:03:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/64/log.48955010._015927.job.log.tgz.1
[2026-03-10 05:03:01]  workdir=None
[2026-03-10 05:03:01] ]
[2026-03-10 05:03:01] 2026-03-10 04:02:27,767 | INFO     | transferring file log.48955010._015927.job.log.tgz.1 from /var/lib/boinc/var/slot40/slots/6/PanDA_Pilot-7040415135/log.48955010._015927.job.log.tgz.1 to /var/lib/b
[2026-03-10 05:03:01] 2026-03-10 04:02:27,768 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot40/slots/6/PanDA_Pilot-7040415135/log.48955010._015927.job.log.tgz.1 /var/lib/boinc/var/slot40/slots/6/lo
[2026-03-10 05:03:01] 2026-03-10 04:02:27,784 | INFO     | adding to output.list: log.48955010._015927.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/64/log.48955010._015927.job.log.tg
[2026-03-10 05:03:01] 2026-03-10 04:02:27,785 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 05:03:01] 2026-03-10 04:02:27,785 | INFO     | summary of transferred files:
[2026-03-10 05:03:01] 2026-03-10 04:02:27,785 | INFO     |  -- lfn=log.48955010._015927.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 05:03:01] 2026-03-10 04:02:27,785 | INFO     | stage-out finished correctly
[2026-03-10 05:03:01] 2026-03-10 04:02:29,014 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 05:03:01] 2026-03-10 04:02:29,066 | INFO     | job 7040415135 has state=finished
[2026-03-10 05:03:01] 2026-03-10 04:02:29,066 | INFO     | preparing for final server update for job 7040415135 in state='finished'
[2026-03-10 05:03:01] 2026-03-10 04:02:29,066 | INFO     | reading metadata from: /var/lib/boinc/var/slot40/slots/6/PanDA_Pilot-7040415135/jobReport.json
[2026-03-10 05:03:01] 2026-03-10 04:02:29,068 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot40/slots/6/workernode_map.json
[2026-03-10 05:03:01] 2026-03-10 04:02:29,068 | INFO     | this job has now completed (state=finished)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,068 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,068 | INFO     | log transfer has been attempted: DONE
[2026-03-10 05:03:01] 2026-03-10 04:02:29,068 | INFO     | job 7040415135 has finished - writing final server update
[2026-03-10 05:03:01] 2026-03-10 04:02:29,068 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3749277/.job.ad'
[2026-03-10 05:03:01] 2026-03-10 04:02:29,068 | INFO     | total number of processed events: 400 (read)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,087 | INFO     | using path: /var/lib/boinc/var/slot40/slots/6/PanDA_Pilot-7040415135/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,087 | INFO     | extracted standard info from prmon json
[2026-03-10 05:03:01] 2026-03-10 04:02:29,087 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 05:03:01] 2026-03-10 04:02:29,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 05:03:01] 2026-03-10 04:02:29,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 05:03:01] 2026-03-10 04:02:29,088 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | fitting pss+swap vs Time
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | sum of square deviations: 115715658.0
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | sum of deviations: 302646681.0000001
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | mean x: 1773113042.5
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | mean y: 2329288.5833333335
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | intersect: -4635131074.390511
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | chi2: 0.00029387833114153094
[2026-03-10 05:03:01] 2026-03-10 04:02:29,089 | INFO     | current memory leak: 2.62 B/s (using 72 data points, chi2=0.00)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | could have reported an average CPU frequency of 3594 MHz (6 samples)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | ..............................
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . Timing measurements:
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . get job = 0 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . initial setup = 4 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . payload setup = 4 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . stage-in = 0 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . payload execution = 4775 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . stage-out = 0 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | . log creation = 0 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,090 | INFO     | ..............................
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | 
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | job summary report
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | --------------------------------------------------
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | PanDA job id: 7040415135
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | task id: 48955010
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | errors: (none)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | pilot state: finished 
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | transexitcode: 0
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | exeerrorcode: 0
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | exeerrordiag: 
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | exitcode: 0
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | exitmsg: OK
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | cpuconsumptiontime: 18321 s
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | nevents: 400
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | neventsw: 0
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | pid: 3536659
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | pgrp: 3536659
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | corecount: 4
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | event service: False
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | sizes: {0: 2280190, 11: 2280190, 4783: 2306476, 4784: 2306475, 4785: 2315551, 4786: 2315929}
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | --------------------------------------------------
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | 
[2026-03-10 05:03:01] 2026-03-10 04:02:29,223 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/6
[2026-03-10 05:03:01] 2026-03-10 04:02:29,239 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | job 7040415135 has completed (purged errors)
[2026-03-10 05:03:01] 2026-03-10 04:02:29,240 | INFO     | overall cleanup function is called
[2026-03-10 05:03:01] 2026-03-10 04:02:30,248 | INFO     | --- collectZombieJob: --- 10, [3536659]
[2026-03-10 05:03:01] 2026-03-10 04:02:30,248 | INFO     | zombie collector waiting for pid 3536659
[2026-03-10 05:03:01] 2026-03-10 04:02:30,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 05:03:01] 2026-03-10 04:02:30,248 | INFO     | collected zombie processes
[2026-03-10 05:03:01] 2026-03-10 04:02:30,248 | INFO     | will attempt to kill all subprocesses of pid=3536659
[2026-03-10 05:03:01] 2026-03-10 04:02:30,674 | INFO     | process IDs to be killed: [3536659] (in reverse order)
[2026-03-10 05:03:01] 2026-03-10 04:02:30,887 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 05:03:01] 2026-03-10 04:02:30,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 05:03:01] 2026-03-10 04:02:30,912 | INFO     | did not find any defunct processes belonging to 3536659
[2026-03-10 05:03:01] 2026-03-10 04:02:30,936 | INFO     | did not find any defunct processes belonging to 3536659
[2026-03-10 05:03:01] 2026-03-10 04:02:30,936 | INFO     | ready for new job
[2026-03-10 05:03:01] 2026-03-10 04:02:30,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 05:03:01] 2026-03-10 04:02:30,938 | INFO     | **************************************
[2026-03-10 05:03:01] 2026-03-10 04:02:30,938 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 05:03:01] 2026-03-10 04:02:30,938 | INFO     | **************************************
[2026-03-10 05:03:01] 2026-03-10 04:02:30,938 | INFO     | 
[2026-03-10 05:03:01] 2026-03-10 04:02:30,943 | INFO     | architecture information:
[2026-03-10 05:03:01] 2026-03-10 04:02:30,944 | INFO     | executing command: cat /etc/os-release
[2026-03-10 05:03:01] 2026-03-10 04:02:30,958 | INFO     | cat /etc/os-release:
[2026-03-10 05:03:01] NAME="CentOS Linux"
[2026-03-10 05:03:01] VERSION="7 (Core)"
[2026-03-10 05:03:01] ID="centos"
[2026-03-10 05:03:01] ID_LIKE="rhel fedora"
[2026-03-10 05:03:01] VERSION_ID="7"
[2026-03-10 05:03:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 05:03:01] ANSI_COLOR="0;31"
[2026-03-10 05:03:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 05:03:01] HOME_URL="https://www.centos.org/"
[2026-03-10 05:03:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 05:03:01] 
[2026-03-10 05:03:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 05:03:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 05:03:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 05:03:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 05:03:01] 
[2026-03-10 05:03:01] 2026-03-10 04:02:30,958 | INFO     | **************************************
[2026-03-10 05:03:01] 2026-03-10 04:02:31,461 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/6
[2026-03-10 05:03:01] 2026-03-10 04:02:31,477 | INFO     | sufficient remaining disk space (20264779776 B)
[2026-03-10 05:03:01] 2026-03-10 04:02:31,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 05:03:01] 2026-03-10 04:02:31,478 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 05:03:01] 2026-03-10 04:02:31,478 | INFO     | update_server=False
[2026-03-10 05:03:01] 2026-03-10 04:02:31,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 05:03:01] 2026-03-10 04:02:31,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 05:03:01] 2026-03-10 04:02:31,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 05:03:01] 2026-03-10 04:02:31,492 | INFO     | all job control threads have been joined
[2026-03-10 05:03:01] 2026-03-10 04:02:32,150 | INFO     | all payload control threads have been joined
[2026-03-10 05:03:01] 2026-03-10 04:02:32,215 | INFO     | all data control threads have been joined
[2026-03-10 05:03:01] 2026-03-10 04:02:32,221 | WARNING  | process 3536659 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 05:03:01] 2026-03-10 04:02:32,425 | INFO     | job.realtimelogging is not enabled
[2026-03-10 05:03:01] 2026-03-10 04:02:32,483 | INFO     | [job] retrieve thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:32,497 | INFO     | [job] control thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:32,570 | INFO     | using path: /var/lib/boinc/var/slot40/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:03:01] 2026-03-10 04:02:32,570 | INFO     | using path: /var/lib/boinc/var/slot40/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:03:01] 2026-03-10 04:02:32,571 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 05:03:01] 2026-03-10 04:02:32,571 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 05:03:01] 2026-03-10 04:02:32,571 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot40/slots/6/PanDA_Pilot-7040415135/payload.stdout) since it has not been created yet
[2026-03-10 05:03:01] 2026-03-10 04:02:32,571 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/6
[2026-03-10 05:03:01] 2026-03-10 04:02:32,585 | INFO     | sufficient remaining disk space (20452474880 B)
[2026-03-10 05:03:01] 2026-03-10 04:02:32,585 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-10 05:03:01] 2026-03-10 04:02:32,585 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot40/slots/6/PanDA_Pilot-7040415135/HITS.48955010._015927.pool.root.1 since it does not exist
[2026-03-10 05:03:01] 2026-03-10 04:02:32,618 | INFO     | [payload] validate_post thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,068 | INFO     | number of running child processes to parent process 3536659: 1
[2026-03-10 05:03:01] 2026-03-10 04:02:33,068 | INFO     | maximum number of monitored processes: 6
[2026-03-10 05:03:01] 2026-03-10 04:02:33,068 | INFO     | aborting job monitoring since job object (job id=7040415135) has expired
[2026-03-10 05:03:01] 2026-03-10 04:02:33,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:03:01] 2026-03-10 04:02:33,069 | INFO     | will abort loop
[2026-03-10 05:03:01] 2026-03-10 04:02:33,070 | INFO     | [payload] failed_post thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,155 | INFO     | [payload] control thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,226 | INFO     | [data] control thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,305 | INFO     | [job] validate thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,317 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,430 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,484 | INFO     | [data] copytool_out thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,489 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,678 | INFO     | [data] copytool_in thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:33,768 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:34,074 | INFO     | [job] job monitor thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:34,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:03:01] 2026-03-10 04:02:35,158 | INFO     | [job] queue monitor thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:35,489 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 05:03:01] 2026-03-10 04:02:39,550 | INFO     | [monitor] cgroup control has ended
[2026-03-10 05:03:01] 2026-03-10 04:02:41,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23206103549760)>', '<ExcThread(monitor, started 23205864814336)>']
[2026-03-10 05:03:01] 2026-03-10 04:02:46,622 | INFO     | all workflow threads have been joined
[2026-03-10 05:03:01] 2026-03-10 04:02:46,622 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 05:03:01] 2026-03-10 04:02:46,622 | INFO     | traces error code: 0
[2026-03-10 05:03:01] 2026-03-10 04:02:46,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 05:03:01] 2026-03-10 04:03:00,927 | INFO     | PID=3530848 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 05:03:01] 2026-03-10 04:03:00,928 | INFO     | .. there are 62 such processes running
[2026-03-10 05:03:01] 2026-03-10 04:03:00,928 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 05:03:01] 2026-03-10 04:03:00,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 05:03:01] 2026-03-10 04:03:00,928 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 05:03:01] 2026-03-10 04:03:00,928 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 05:03:01] 2026-03-10 04:03:00,928 | INFO     | [monitor] control thread has ended
[2026-03-10 05:03:01] 2026-03-10 04:03:01,034 [wrapper] ==== pilot stdout END ====
[2026-03-10 05:03:01] 2026-03-10 04:03:01,037 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 05:03:01] 2026-03-10 04:03:01,040 [wrapper] pilotpid: 3530848
[2026-03-10 05:03:01] 2026-03-10 04:03:01,042 [wrapper] Pilot exit status: 0
[2026-03-10 05:03:01] 2026-03-10 04:03:01,051 [wrapper] pandaids: 7040415135
[2026-03-10 05:03:01] 2026-03-10 04:03:01,162 [wrapper] cleanup supervisor_pilot  196953 3530849
[2026-03-10 05:03:01] 2026-03-10 04:03:01,165 [wrapper] Test setup, not cleaning
[2026-03-10 05:03:01] 2026-03-10 04:03:01,167 [wrapper] apfmon messages muted
[2026-03-10 05:03:01] 2026-03-10 04:03:01,169 [wrapper] ==== wrapper stdout END ====
[2026-03-10 05:03:01] 2026-03-10 04:03:01,171 [wrapper] ==== wrapper stderr END ====
[2026-03-10 05:03:01]  *** Error codes and diagnostics ***
[2026-03-10 05:03:01]     "exeErrorCode": 0,
[2026-03-10 05:03:01]     "exeErrorDiag": "",
[2026-03-10 05:03:01]     "pilotErrorCode": 0,
[2026-03-10 05:03:01]     "pilotErrorDiag": "",
[2026-03-10 05:03:01]  *** Listing of results directory ***
[2026-03-10 05:03:01] total 615412
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-10 05:03:01] -rwx------. 1 boinc boinc     36322 Mar  9 05:07 runpilot2-wrapper.sh
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc      5111 Mar  9 05:08 queuedata.json
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 05:03:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:42 run_atlas
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:42 job.xml
[2026-03-10 05:03:01] -rw-r--r--. 2 boinc boinc 442814800 Mar 10 03:42 EVNT.46701403._001318.pool.root.1
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc      6705 Mar 10 03:42 init_data.xml
[2026-03-10 05:03:01] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:42 start_atlas.sh
[2026-03-10 05:03:01] drwxrwx--x. 2 boinc boinc      4096 Mar 10 03:42 shared
[2026-03-10 05:03:01] -rw-r--r--. 2 boinc boinc    597956 Mar 10 03:42 input.tar.gz
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:42 boinc_lockfile
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc      2563 Mar 10 03:42 pandaJob.out
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc   1002338 Mar 10 03:42 agis_schedconf.cvmfs.json
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc   1511578 Mar 10 03:42 agis_ddmendpoints.agis.ALL.json
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc       443 Mar 10 03:42 workernode_map.json
[2026-03-10 05:03:01] drwx------. 5 boinc boinc      4096 Mar 10 03:42 pilot3
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc       530 Mar 10 05:02 boinc_task_state.xml
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc 181399598 Mar 10 05:02 HITS.48955010._015927.pool.root.1
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc        95 Mar 10 05:02 pilot_heartbeat.json
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc      1031 Mar 10 05:02 memory_monitor_summary.json
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc    309558 Mar 10 05:02 log.48955010._015927.job.log.tgz.1
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc      6354 Mar 10 05:02 heartbeat.json
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc      8192 Mar 10 05:02 boinc_mmap_file
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc        27 Mar 10 05:02 wrapper_checkpoint.txt
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc       823 Mar 10 05:03 pilotlog.txt
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc    705095 Mar 10 05:03 log.48955010._015927.job.log.1
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc       357 Mar 10 05:03 output.list
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc       620 Mar 10 05:03 runtime_log
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc   1034240 Mar 10 05:03 result.tar.gz
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc      9204 Mar 10 05:03 runtime_log.err
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc       662 Mar 10 05:03 M5oNDms4gJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYObLDmbR5Awm.diag
[2026-03-10 05:03:01] -rw-r--r--. 1 boinc boinc     22022 Mar 10 05:03 stderr.txt
[2026-03-10 05:03:01] HITS file was successfully produced:
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc 181399598 Mar 10 05:02 shared/HITS.pool.root.1
[2026-03-10 05:03:01]  *** Contents of shared directory: ***
[2026-03-10 05:03:01] total 611212
[2026-03-10 05:03:01] -rw-r--r--. 2 boinc boinc 442814800 Mar 10 03:42 ATLAS.root_0
[2026-03-10 05:03:01] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:42 start_atlas.sh
[2026-03-10 05:03:01] -rw-r--r--. 2 boinc boinc    597956 Mar 10 03:42 input.tar.gz
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc 181399598 Mar 10 05:02 HITS.pool.root.1
[2026-03-10 05:03:01] -rw-------. 1 boinc boinc   1034240 Mar 10 05:03 result.tar.gz
05:03:03 (3526343): run_atlas exited; CPU time 18523.593234
05:03:03 (3526343): called boinc_finish(0)

</stderr_txt>
]]>

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