Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:51 (789): wrapper (7.7.26015): starting
16:46:51 (789): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 16:46:51] Arguments: --nthreads 8
[2026-03-09 16:46:51] Threads: 8
[2026-03-09 16:46:51] Checking for CVMFS
[2026-03-09 16:46:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 16:46:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 16:46:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 16:46:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 16:46:54] 2.11.2.0 27806 120556 135368 157081 3 94 19838894 25165825 1081 130560 165 39710249 99.808 27701948 970 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-09 16:46:54] CVMFS is ok
[2026-03-09 16:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:46:54] Checking for apptainer binary...
[2026-03-09 16:46:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 16:46:54] Running /usr/bin/apptainer --version
[2026-03-09 16:46:55] apptainer version 1.3.2-1.el7
[2026-03-09 16:46:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:47:21] cg-vwn467.simple-grid.lan
[2026-03-09 16:47:21] apptainer works
[2026-03-09 16:47:21] Set ATHENA_PROC_NUMBER=8
[2026-03-09 16:47:21] Set ATHENA_CORE_NUMBER=8
[2026-03-09 16:47:21] Starting ATLAS job with PandaID=7040415119
[2026-03-09 16:47:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:44:01]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:44:01] 2026-03-09 18:43:18,215 | INFO     | job 7040415119 has finished - writing final server update
[2026-03-09 19:44:01] 2026-03-09 18:43:18,215 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,217 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7040415119/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,218 | INFO     | extracted standard info from prmon json
[2026-03-09 19:44:01] 2026-03-09 18:43:18,218 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:44:01] 2026-03-09 18:43:18,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:44:01] 2026-03-09 18:43:18,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:44:01] 2026-03-09 18:43:18,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:44:01] 2026-03-09 18:43:18,226 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:44:01] 2026-03-09 18:43:18,227 | INFO     | sum of square deviations: 1342841922.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,228 | INFO     | sum of deviations: 72532915406.99997
[2026-03-09 19:44:01] 2026-03-09 18:43:18,228 | INFO     | mean x: 1773076825.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,228 | INFO     | mean y: 2379849.392638037
[2026-03-09 19:44:01] 2026-03-09 18:43:18,228 | INFO     | intersect: -95769452449.59712
[2026-03-09 19:44:01] 2026-03-09 18:43:18,229 | INFO     | chi2: 7.4731333665904405
[2026-03-09 19:44:01] 2026-03-09 18:43:18,229 | INFO     | sum of square deviations: 1223016419.5
[2026-03-09 19:44:01] 2026-03-09 18:43:18,230 | INFO     | sum of deviations: 80644314401.00002
[2026-03-09 19:44:01] 2026-03-09 18:43:18,230 | INFO     | mean x: 1773076672.5
[2026-03-09 19:44:01] 2026-03-09 18:43:18,231 | INFO     | mean y: 2389830.189873418
[2026-03-09 19:44:01] 2026-03-09 18:43:18,231 | INFO     | intersect: -116912273255.5488
[2026-03-09 19:44:01] 2026-03-09 18:43:18,231 | INFO     | chi2: 6.787398060925999
[2026-03-09 19:44:01] 2026-03-09 18:43:18,231 | INFO     | current chi2=6.787398060925999 (change=9.17600786746434 %)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,231 | INFO     | right removable region: 157
[2026-03-09 19:44:01] 2026-03-09 18:43:18,232 | INFO     | sum of square deviations: 1223016419.5
[2026-03-09 19:44:01] 2026-03-09 18:43:18,233 | INFO     | sum of deviations: 19051764823.5
[2026-03-09 19:44:01] 2026-03-09 18:43:18,233 | INFO     | mean x: 1773076977.5
[2026-03-09 19:44:01] 2026-03-09 18:43:18,233 | INFO     | mean y: 2447834.3860759493
[2026-03-09 19:44:01] 2026-03-09 18:43:18,233 | INFO     | intersect: -27617987223.307117
[2026-03-09 19:44:01] 2026-03-09 18:43:18,233 | INFO     | chi2: 2.7030319959234386
[2026-03-09 19:44:01] 2026-03-09 18:43:18,234 | INFO     | current chi2=2.7030319959234386 (change=63.83000458672831 %)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,234 | INFO     | sum of square deviations: 1110539892.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,235 | INFO     | sum of deviations: -13233121620.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,235 | INFO     | mean x: 1773077130.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,235 | INFO     | mean y: 2491309.431372549
[2026-03-09 19:44:01] 2026-03-09 18:43:18,235 | INFO     | intersect: 21130363862.190197
[2026-03-09 19:44:01] 2026-03-09 18:43:18,236 | INFO     | chi2: 0.8842951292653903
[2026-03-09 19:44:01] 2026-03-09 18:43:18,236 | INFO     | current chi2=0.8842951292653903 (change=67.28506615537535 %)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,236 | INFO     | sum of square deviations: 1005179777.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,237 | INFO     | sum of deviations: -12049190920.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,237 | INFO     | mean x: 1773077282.5
[2026-03-09 19:44:01] 2026-03-09 18:43:18,238 | INFO     | mean y: 2489485.2162162163
[2026-03-09 19:44:01] 2026-03-09 18:43:18,238 | INFO     | intersect: 21256544910.524754
[2026-03-09 19:44:01] 2026-03-09 18:43:18,238 | INFO     | chi2: 0.8554913654603258
[2026-03-09 19:44:01] 2026-03-09 18:43:18,238 | INFO     | current chi2=0.8554913654603258 (change=3.2572568650234084 %)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,238 | INFO     | left removable region: 30
[2026-03-09 19:44:01] 2026-03-09 18:43:18,239 | INFO     | sum of square deviations: 635130048.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,239 | INFO     | sum of deviations: 2430423610.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,240 | INFO     | mean x: 1773077557.0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,240 | INFO     | mean y: 2496655.1102362205
[2026-03-09 19:44:01] 2026-03-09 18:43:18,240 | INFO     | intersect: -6782459544.748097
[2026-03-09 19:44:01] 2026-03-09 18:43:18,240 | INFO     | chi2: 0.00010400651209084767
[2026-03-09 19:44:01] 2026-03-09 18:43:18,240 | INFO     | current memory leak: 3.83 B/s (using 127 data points, chi2=0.00)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,241 | INFO     | could have reported an average CPU frequency of 2250 MHz (9 samples)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,241 | INFO     | ..............................
[2026-03-09 19:44:01] 2026-03-09 18:43:18,241 | INFO     | . Timing measurements:
[2026-03-09 19:44:01] 2026-03-09 18:43:18,241 | INFO     | . get job = 0 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,242 | INFO     | . initial setup = 123 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,242 | INFO     | . payload setup = 127 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,242 | INFO     | . stage-in = 0 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,242 | INFO     | . payload execution = 10035 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,242 | INFO     | . stage-out = 1 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,242 | INFO     | . log creation = 0 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,242 | INFO     | ..............................
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | 
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | job summary report
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | --------------------------------------------------
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | PanDA job id: 7040415119
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | task id: 48955010
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | errors: (none)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | pilot state: finished 
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | transexitcode: 0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,363 | INFO     | exeerrorcode: 0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | exeerrordiag: 
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | exitcode: 0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | exitmsg: OK
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | cpuconsumptiontime: 47858 s
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | nevents: 400
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | neventsw: 0
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | pid: 9252
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | pgrp: 9252
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | corecount: 8
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | event service: False
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | sizes: {0: 2279089, 1: 2279774, 2: 2280235, 3: 2280235, 13: 2280263, 10167: 2309047, 10168: 2318045, 10169: 2318101, 10172: 2318387}
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | --------------------------------------------------
[2026-03-09 19:44:01] 2026-03-09 18:43:18,364 | INFO     | 
[2026-03-09 19:44:01] 2026-03-09 18:43:18,365 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-09 19:44:01] 2026-03-09 18:43:18,849 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,849 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,849 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,849 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,851 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,851 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:44:01] 2026-03-09 18:43:18,851 | INFO     | job 7040415119 has completed (purged errors)
[2026-03-09 19:44:01] 2026-03-09 18:43:18,851 | INFO     | overall cleanup function is called
[2026-03-09 19:44:01] 2026-03-09 18:43:19,860 | INFO     | --- collectZombieJob: --- 10, [9252]
[2026-03-09 19:44:01] 2026-03-09 18:43:19,860 | INFO     | zombie collector waiting for pid 9252
[2026-03-09 19:44:01] 2026-03-09 18:43:19,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:44:01] 2026-03-09 18:43:19,861 | INFO     | collected zombie processes
[2026-03-09 19:44:01] 2026-03-09 18:43:19,861 | INFO     | will attempt to kill all subprocesses of pid=9252
[2026-03-09 19:44:01] 2026-03-09 18:43:19,942 | INFO     | process IDs to be killed: [9252] (in reverse order)
[2026-03-09 19:44:01] 2026-03-09 18:43:20,801 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:44:01] 2026-03-09 18:43:20,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:44:01] 2026-03-09 18:43:20,804 | INFO     | did not find any defunct processes belonging to 9252
[2026-03-09 19:44:01] 2026-03-09 18:43:20,806 | INFO     | did not find any defunct processes belonging to 9252
[2026-03-09 19:44:01] 2026-03-09 18:43:20,806 | INFO     | ready for new job
[2026-03-09 19:44:01] 2026-03-09 18:43:20,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:44:01] 2026-03-09 18:43:20,808 | INFO     | **************************************
[2026-03-09 19:44:01] 2026-03-09 18:43:20,808 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:44:01] 2026-03-09 18:43:20,808 | INFO     | **************************************
[2026-03-09 19:44:01] 2026-03-09 18:43:20,808 | INFO     | 
[2026-03-09 19:44:01] 2026-03-09 18:43:20,809 | INFO     | pilot is running in a VM
[2026-03-09 19:44:01] 2026-03-09 18:43:20,809 | INFO     | architecture information:
[2026-03-09 19:44:01] 2026-03-09 18:43:20,818 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:44:01] 2026-03-09 18:43:21,022 | INFO     | cat /etc/os-release:
[2026-03-09 19:44:01] NAME="CentOS Linux"
[2026-03-09 19:44:01] VERSION="7 (Core)"
[2026-03-09 19:44:01] ID="centos"
[2026-03-09 19:44:01] ID_LIKE="rhel fedora"
[2026-03-09 19:44:01] VERSION_ID="7"
[2026-03-09 19:44:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:44:01] ANSI_COLOR="0;31"
[2026-03-09 19:44:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:44:01] HOME_URL="https://www.centos.org/"
[2026-03-09 19:44:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:44:01] 
[2026-03-09 19:44:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:44:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:44:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:44:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:44:01] 
[2026-03-09 19:44:01] 2026-03-09 18:43:21,023 | INFO     | **************************************
[2026-03-09 19:44:01] 2026-03-09 18:43:21,526 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-09 19:44:01] 2026-03-09 18:43:21,728 | INFO     | sufficient remaining disk space (497207476224 B)
[2026-03-09 19:44:01] 2026-03-09 18:43:21,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:44:01] 2026-03-09 18:43:21,728 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:44:01] 2026-03-09 18:43:21,728 | INFO     | update_server=False
[2026-03-09 19:44:01] 2026-03-09 18:43:21,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:44:01] 2026-03-09 18:43:21,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:44:01] 2026-03-09 18:43:21,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:44:01] 2026-03-09 18:43:21,729 | INFO     | aborting loop
[2026-03-09 19:44:01] 2026-03-09 18:43:21,749 | INFO     | all data control threads have been joined
[2026-03-09 19:44:01] 2026-03-09 18:43:22,159 | INFO     | all payload control threads have been joined
[2026-03-09 19:44:01] 2026-03-09 18:43:22,734 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:22,735 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:22,736 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:22,755 | INFO     | [data] control thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:22,781 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:23,024 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:23,165 | INFO     | [payload] control thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:23,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:44:01] 2026-03-09 18:43:23,254 | INFO     | all job control threads have been joined
[2026-03-09 19:44:01] 2026-03-09 18:43:23,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:44:01] 2026-03-09 18:43:23,486 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:23,637 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:23,697 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:24,080 | INFO     | [job] validate thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:24,260 | INFO     | [job] control thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:24,383 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:25,187 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:25,737 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:31,980 | INFO     | job.realtimelogging is not enabled
[2026-03-09 19:44:01] 2026-03-09 18:43:32,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:44:01] 2026-03-09 18:43:49,833 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:44:01] 2026-03-09 18:43:51,388 | INFO     | PID=4793 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-09 19:44:01] 2026-03-09 18:43:51,389 | INFO     | .. there are 2 such processes running
[2026-03-09 19:44:01] 2026-03-09 18:43:51,389 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:44:01] 2026-03-09 18:43:51,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:44:01] 2026-03-09 18:43:51,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:44:01] 2026-03-09 18:43:51,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693060863808)>', '<ExcThread(monitor, started 139692376835840)>']
[2026-03-09 19:44:01] 2026-03-09 18:43:52,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:44:01] 2026-03-09 18:43:52,395 | INFO     | [monitor] control thread has ended
[2026-03-09 19:44:01] 2026-03-09 18:43:56,825 | INFO     | all workflow threads have been joined
[2026-03-09 19:44:01] 2026-03-09 18:43:56,825 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:44:01] 2026-03-09 18:43:56,826 | INFO     | traces error code: 0
[2026-03-09 19:44:01] 2026-03-09 18:43:56,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:44:01] 2026-03-09 18:43:57,025 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:44:01] 2026-03-09 18:43:57,111 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:44:01] 2026-03-09 18:43:57,214 [wrapper] pilotpid: 4793
[2026-03-09 19:44:01] 2026-03-09 18:43:57,276 [wrapper] Pilot exit status: 0
[2026-03-09 19:44:01] 2026-03-09 18:43:57,805 [wrapper] pandaids: 7040415119
[2026-03-09 19:44:01] 2026-03-09 18:43:58,480 [wrapper] cleanup supervisor_pilot 30875 4794
[2026-03-09 19:44:01] 2026-03-09 18:43:58,551 [wrapper] Test setup, not cleaning
[2026-03-09 19:44:01] 2026-03-09 18:43:58,606 [wrapper] apfmon messages muted
[2026-03-09 19:44:01] 2026-03-09 18:43:58,698 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:44:01] 2026-03-09 18:43:58,795 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:44:01]  *** Error codes and diagnostics ***
[2026-03-09 19:44:01]     "exeErrorCode": 0,
[2026-03-09 19:44:01]     "exeErrorDiag": "",
[2026-03-09 19:44:01]     "pilotErrorCode": 0,
[2026-03-09 19:44:01]     "pilotErrorDiag": "",
[2026-03-09 19:44:01]  *** Listing of results directory ***
[2026-03-09 19:44:01] total 618488
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc      5111 Mar  9 05:04 queuedata.json
[2026-03-09 19:44:01] -rwx------. 1 boinc boinc     36322 Mar  9 05:04 runpilot2-wrapper.sh
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc       100 Mar  9 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:44:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 16:46 run_atlas
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc       105 Mar  9 16:46 job.xml
[2026-03-09 19:44:01] -rw-r--r--. 2 boinc boinc 442814800 Mar  9 16:46 EVNT.46701403._001318.pool.root.1
[2026-03-09 19:44:01] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:46 start_atlas.sh
[2026-03-09 19:44:01] drwxrwx--x. 2 boinc boinc        68 Mar  9 16:46 shared
[2026-03-09 19:44:01] -rw-r--r--. 2 boinc boinc    597959 Mar  9 16:46 input.tar.gz
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc      6390 Mar  9 16:46 init_data.xml
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc         0 Mar  9 16:46 boinc_lockfile
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc      2563 Mar  9 16:47 pandaJob.out
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc   1511578 Mar  9 16:51 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc       413 Mar  9 16:53 workernode_map.json
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc   1002554 Mar  9 16:53 agis_schedconf.cvmfs.json
[2026-03-09 19:44:01] drwx------. 5 boinc boinc      4096 Mar  9 16:53 pilot3
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc 182828518 Mar  9 19:42 HITS.48955010._015911.pool.root.1
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc       531 Mar  9 19:43 boinc_task_state.xml
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc      1022 Mar  9 19:43 memory_monitor_summary.json
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc    430501 Mar  9 19:43 log.48955010._015911.job.log.tgz.1
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc      6323 Mar  9 19:43 heartbeat.json
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc      8192 Mar  9 19:43 boinc_mmap_file
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc        28 Mar  9 19:43 wrapper_checkpoint.txt
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc        95 Mar  9 19:43 pilot_heartbeat.json
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc      4951 Mar  9 19:43 pilotlog.txt
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc   1451890 Mar  9 19:43 log.48955010._015911.job.log.1
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc       357 Mar  9 19:44 output.list
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc       620 Mar  9 19:44 runtime_log
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc   1904640 Mar  9 19:44 result.tar.gz
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc      8816 Mar  9 19:44 runtime_log.err
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc       654 Mar  9 19:44 6PLMDmy1gJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmPLbLDmnAWyhm.diag
[2026-03-09 19:44:01] -rw-r--r--. 1 boinc boinc     20695 Mar  9 19:44 stderr.txt
[2026-03-09 19:44:01] HITS file was successfully produced:
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc 182828518 Mar  9 19:42 shared/HITS.pool.root.1
[2026-03-09 19:44:01]  *** Contents of shared directory: ***
[2026-03-09 19:44:01] total 613444
[2026-03-09 19:44:01] -rw-r--r--. 2 boinc boinc 442814800 Mar  9 16:46 ATLAS.root_0
[2026-03-09 19:44:01] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:46 start_atlas.sh
[2026-03-09 19:44:01] -rw-r--r--. 2 boinc boinc    597959 Mar  9 16:46 input.tar.gz
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc 182828518 Mar  9 19:42 HITS.pool.root.1
[2026-03-09 19:44:01] -rw-------. 1 boinc boinc   1904640 Mar  9 19:44 result.tar.gz
19:44:03 (789): run_atlas exited; CPU time 47961.966647
19:44:03 (789): called boinc_finish(0)

</stderr_txt>
]]>

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