Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:20:16 (1493087): wrapper (7.7.26015): starting
02:20:16 (1493087): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:20:16] Arguments: --nthreads 4
[2026-03-10 02:20:16] Threads: 4
[2026-03-10 02:20:16] Checking for CVMFS
[2026-03-10 02:20:16] No cvmfs_config command found, will try listing directly
[2026-03-10 02:20:16] CVMFS is ok
[2026-03-10 02:20:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:20:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:20:16] Further information can be found at the LHC@home message board.
[2026-03-10 02:20:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:20:16] Checking for apptainer binary...
[2026-03-10 02:20:16] which: no apptainer in ((null))
[2026-03-10 02:20:16] apptainer is not installed, using version from CVMFS
[2026-03-10 02:20:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:20:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-10 02:20:16] apptainer works
[2026-03-10 02:20:16] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:20:16] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:20:16] Starting ATLAS job with PandaID=7040409856
[2026-03-10 02:20:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 03:34:39]  *** The last 200 lines of the pilot log: ***
[2026-03-10 03:34:39] ]
[2026-03-10 03:34:39] 2026-03-10 02:33:56,748 | INFO     | transferring file log.48955006._031485.job.log.tgz.1 from /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/log.48955006._031485.job.log.tgz.1 to /var/lib/b
[2026-03-10 03:34:39] 2026-03-10 02:33:56,748 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/log.48955006._031485.job.log.tgz.1 /var/lib/boinc/var/slot68/slots/4/lo
[2026-03-10 03:34:39] 2026-03-10 02:33:56,765 | INFO     | adding to output.list: log.48955006._031485.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/8f/log.48955006._031485.job.log.tg
[2026-03-10 03:34:39] 2026-03-10 02:33:56,766 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 03:34:39] 2026-03-10 02:33:56,766 | INFO     | summary of transferred files:
[2026-03-10 03:34:39] 2026-03-10 02:33:56,766 | INFO     |  -- lfn=log.48955006._031485.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 03:34:39] 2026-03-10 02:33:56,766 | INFO     | stage-out finished correctly
[2026-03-10 03:34:39] 2026-03-10 02:33:58,148 | INFO     | time since job start (4411s) is within the limit (349056.0s)
[2026-03-10 03:34:39] 2026-03-10 02:33:58,668 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 03:34:39] 2026-03-10 02:34:00,153 | INFO     | time since job start (4413s) is within the limit (349056.0s)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,279 | WARNING  | process 1503316 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 03:34:39] 2026-03-10 02:34:00,279 | INFO     | using path: /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,280 | INFO     | using path: /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,280 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 03:34:39] 2026-03-10 02:34:00,280 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 03:34:39] 2026-03-10 02:34:00,281 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2519138 B
[2026-03-10 03:34:39] 2026-03-10 02:34:00,281 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15853 B
[2026-03-10 03:34:39] 2026-03-10 02:34:00,281 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/4
[2026-03-10 03:34:39] 2026-03-10 02:34:00,300 | INFO     | sufficient remaining disk space (20911751168 B)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,300 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,301 | INFO     | size of work directory /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856: 2816554 B (within 5033164800 B limit)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,301 | INFO     | pfn file=/var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/HITS.48955006._031485.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,301 | INFO     | total size of present files: 0 B (workdir size: 2816554 B)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,301 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/HITS.48955006._031485.pool.root.1 since it does not exist
[2026-03-10 03:34:39] 2026-03-10 02:34:00,304 | INFO     | job 7040409856 has state=finished
[2026-03-10 03:34:39] 2026-03-10 02:34:00,304 | INFO     | preparing for final server update for job 7040409856 in state='finished'
[2026-03-10 03:34:39] 2026-03-10 02:34:00,308 | INFO     | reading metadata from: /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/jobReport.json
[2026-03-10 03:34:39] 2026-03-10 02:34:00,310 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot68/slots/4/workernode_map.json
[2026-03-10 03:34:39] 2026-03-10 02:34:00,310 | INFO     | this job has now completed (state=finished)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,310 | INFO     | log transfer has been attempted: DONE
[2026-03-10 03:34:39] 2026-03-10 02:34:00,310 | INFO     | job 7040409856 has finished - writing final server update
[2026-03-10 03:34:39] 2026-03-10 02:34:00,314 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2615667/.job.ad'
[2026-03-10 03:34:39] 2026-03-10 02:34:00,314 | INFO     | total number of processed events: 400 (read)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,338 | INFO     | using path: /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7040409856/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,338 | INFO     | extracted standard info from prmon json
[2026-03-10 03:34:39] 2026-03-10 02:34:00,339 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 03:34:39] 2026-03-10 02:34:00,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 03:34:39] 2026-03-10 02:34:00,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 03:34:39] 2026-03-10 02:34:00,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 03:34:39] 2026-03-10 02:34:00,340 | INFO     | fitting pss+swap vs Time
[2026-03-10 03:34:39] 2026-03-10 02:34:00,340 | INFO     | sum of square deviations: 85136480.0
[2026-03-10 03:34:39] 2026-03-10 02:34:00,340 | INFO     | sum of deviations: -246498621.0
[2026-03-10 03:34:39] 2026-03-10 02:34:00,340 | INFO     | mean x: 1773107904.0
[2026-03-10 03:34:39] 2026-03-10 02:34:00,340 | INFO     | mean y: 2329978.3538461537
[2026-03-10 03:34:39] 2026-03-10 02:34:00,340 | INFO     | intersect: 5136071157.460622
[2026-03-10 03:34:39] 2026-03-10 02:34:00,340 | INFO     | chi2: 6.242676257561754e-05
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | current memory leak: -2.90 B/s (using 65 data points, chi2=0.00)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | could have reported an average CPU frequency of 3639 MHz (6 samples)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | ..............................
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . Timing measurements:
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . get job = 0 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . initial setup = 4 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . payload setup = 4 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . stage-in = 0 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . payload execution = 4390 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . stage-out = 0 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | . log creation = 0 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,341 | INFO     | ..............................
[2026-03-10 03:34:39] 2026-03-10 02:34:00,781 | INFO     | number of running child processes to parent process 1503316: 1
[2026-03-10 03:34:39] 2026-03-10 02:34:00,781 | INFO     | maximum number of monitored processes: 6
[2026-03-10 03:34:39] 2026-03-10 02:34:00,781 | INFO     | aborting job monitoring since job object (job id=7040409856) has expired
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | 
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | job summary report
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | --------------------------------------------------
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | PanDA job id: 7040409856
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | task id: 48955006
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | errors: (none)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 03:34:39] 2026-03-10 02:34:00,870 | INFO     | pilot state: finished 
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | transexitcode: 0
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | exeerrorcode: 0
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | exeerrordiag: 
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | exitcode: 0
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | exitmsg: OK
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | cpuconsumptiontime: 16910 s
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | nevents: 400
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | neventsw: 0
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | pid: 1503316
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | pgrp: 1503316
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | corecount: 4
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | event service: False
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | sizes: {0: 2279979, 1: 2280241, 11: 2280269, 4398: 2306318, 4399: 2315338, 4400: 2315394, 4402: 2315840}
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | --------------------------------------------------
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | 
[2026-03-10 03:34:39] 2026-03-10 02:34:00,871 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/4
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | job 7040409856 has completed (purged errors)
[2026-03-10 03:34:39] 2026-03-10 02:34:00,888 | INFO     | overall cleanup function is called
[2026-03-10 03:34:39] 2026-03-10 02:34:01,894 | INFO     | --- collectZombieJob: --- 10, [1503316]
[2026-03-10 03:34:39] 2026-03-10 02:34:01,894 | INFO     | zombie collector waiting for pid 1503316
[2026-03-10 03:34:39] 2026-03-10 02:34:01,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 03:34:39] 2026-03-10 02:34:01,894 | INFO     | collected zombie processes
[2026-03-10 03:34:39] 2026-03-10 02:34:01,894 | INFO     | will attempt to kill all subprocesses of pid=1503316
[2026-03-10 03:34:39] 2026-03-10 02:34:02,291 | INFO     | process IDs to be killed: [1503316] (in reverse order)
[2026-03-10 03:34:39] 2026-03-10 02:34:02,491 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 03:34:39] 2026-03-10 02:34:02,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 03:34:39] 2026-03-10 02:34:02,516 | INFO     | did not find any defunct processes belonging to 1503316
[2026-03-10 03:34:39] 2026-03-10 02:34:02,540 | INFO     | did not find any defunct processes belonging to 1503316
[2026-03-10 03:34:39] 2026-03-10 02:34:02,540 | INFO     | ready for new job
[2026-03-10 03:34:39] 2026-03-10 02:34:02,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 03:34:39] 2026-03-10 02:34:02,541 | INFO     | **************************************
[2026-03-10 03:34:39] 2026-03-10 02:34:02,542 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 03:34:39] 2026-03-10 02:34:02,542 | INFO     | **************************************
[2026-03-10 03:34:39] 2026-03-10 02:34:02,542 | INFO     | 
[2026-03-10 03:34:39] 2026-03-10 02:34:02,547 | INFO     | architecture information:
[2026-03-10 03:34:39] 2026-03-10 02:34:02,547 | INFO     | executing command: cat /etc/os-release
[2026-03-10 03:34:39] 2026-03-10 02:34:02,562 | INFO     | cat /etc/os-release:
[2026-03-10 03:34:39] NAME="CentOS Linux"
[2026-03-10 03:34:39] VERSION="7 (Core)"
[2026-03-10 03:34:39] ID="centos"
[2026-03-10 03:34:39] ID_LIKE="rhel fedora"
[2026-03-10 03:34:39] VERSION_ID="7"
[2026-03-10 03:34:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 03:34:39] ANSI_COLOR="0;31"
[2026-03-10 03:34:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 03:34:39] HOME_URL="https://www.centos.org/"
[2026-03-10 03:34:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 03:34:39] 
[2026-03-10 03:34:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 03:34:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 03:34:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 03:34:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 03:34:39] 
[2026-03-10 03:34:39] 2026-03-10 02:34:02,562 | INFO     | **************************************
[2026-03-10 03:34:39] 2026-03-10 02:34:03,065 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/4
[2026-03-10 03:34:39] 2026-03-10 02:34:03,076 | INFO     | sufficient remaining disk space (20908605440 B)
[2026-03-10 03:34:39] 2026-03-10 02:34:03,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 03:34:39] 2026-03-10 02:34:03,076 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 03:34:39] 2026-03-10 02:34:03,076 | INFO     | update_server=False
[2026-03-10 03:34:39] 2026-03-10 02:34:03,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 03:34:39] 2026-03-10 02:34:03,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 03:34:39] 2026-03-10 02:34:03,284 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 03:34:39] 2026-03-10 02:34:03,285 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 03:34:39] 2026-03-10 02:34:03,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:34:39] 2026-03-10 02:34:03,285 | INFO     | will abort loop
[2026-03-10 03:34:39] 2026-03-10 02:34:03,630 | INFO     | all payload control threads have been joined
[2026-03-10 03:34:39] 2026-03-10 02:34:03,862 | INFO     | all data control threads have been joined
[2026-03-10 03:34:39] 2026-03-10 02:34:04,081 | INFO     | [job] retrieve thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:04,267 | INFO     | all job control threads have been joined
[2026-03-10 03:34:39] 2026-03-10 02:34:04,290 | INFO     | [job] job monitor thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:04,597 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:04,635 | INFO     | [payload] control thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:04,644 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:04,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 03:34:39] 2026-03-10 02:34:04,867 | INFO     | [data] control thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:04,944 | INFO     | [job] validate thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:05,058 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:05,082 | INFO     | [data] copytool_out thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:05,146 | INFO     | [payload] validate_post thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:05,223 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:05,272 | INFO     | [job] control thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:05,331 | INFO     | [payload] failed_post thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:05,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:34:39] 2026-03-10 02:34:05,407 | INFO     | [data] copytool_in thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:06,410 | INFO     | [job] queue monitor thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:08,731 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 03:34:39] 2026-03-10 02:34:33,679 | INFO     | PID=1497620 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 03:34:39] 2026-03-10 02:34:33,679 | INFO     | .. there are 58 such processes running
[2026-03-10 03:34:39] 2026-03-10 02:34:33,679 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 03:34:39] 2026-03-10 02:34:33,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 03:34:39] 2026-03-10 02:34:33,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 03:34:39] 2026-03-10 02:34:34,040 | INFO     | [monitor] cgroup control has ended
[2026-03-10 03:34:39] 2026-03-10 02:34:34,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23335481403200)>', '<ExcThread(monitor, started 23335244412672)>']
[2026-03-10 03:34:39] 2026-03-10 02:34:34,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 03:34:39] 2026-03-10 02:34:34,684 | INFO     | [monitor] control thread has ended
[2026-03-10 03:34:39] 2026-03-10 02:34:39,190 | INFO     | all workflow threads have been joined
[2026-03-10 03:34:39] 2026-03-10 02:34:39,190 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 03:34:39] 2026-03-10 02:34:39,190 | INFO     | traces error code: 0
[2026-03-10 03:34:39] 2026-03-10 02:34:39,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 03:34:39] 2026-03-10 02:34:39,326 [wrapper] ==== pilot stdout END ====
[2026-03-10 03:34:39] 2026-03-10 02:34:39,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 03:34:39] 2026-03-10 02:34:39,331 [wrapper] pilotpid: 1497620
[2026-03-10 03:34:39] 2026-03-10 02:34:39,333 [wrapper] Pilot exit status: 0
[2026-03-10 03:34:39] 2026-03-10 02:34:39,340 [wrapper] pandaids: 7040409856
[2026-03-10 03:34:39] 2026-03-10 02:34:39,444 [wrapper] cleanup supervisor_pilot 2181902 1497621
[2026-03-10 03:34:39] 2026-03-10 02:34:39,446 [wrapper] Test setup, not cleaning
[2026-03-10 03:34:39] 2026-03-10 02:34:39,448 [wrapper] apfmon messages muted
[2026-03-10 03:34:39] 2026-03-10 02:34:39,450 [wrapper] ==== wrapper stdout END ====
[2026-03-10 03:34:39] 2026-03-10 02:34:39,452 [wrapper] ==== wrapper stderr END ====
[2026-03-10 03:34:39]  *** Error codes and diagnostics ***
[2026-03-10 03:34:39]     "exeErrorCode": 0,
[2026-03-10 03:34:39]     "exeErrorDiag": "",
[2026-03-10 03:34:39]     "pilotErrorCode": 0,
[2026-03-10 03:34:39]     "pilotErrorDiag": "",
[2026-03-10 03:34:39]  *** Listing of results directory ***
[2026-03-10 03:34:39] total 614512
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-10 03:34:39] -rwx------. 1 boinc boinc     36322 Mar  9 05:04 runpilot2-wrapper.sh
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc      5111 Mar  9 05:04 queuedata.json
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 03:34:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:20 run_atlas
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:20 job.xml
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc      6707 Mar 10 02:20 init_data.xml
[2026-03-10 03:34:39] -rw-r--r--. 2 boinc boinc 439536831 Mar 10 02:20 EVNT.46701403._000630.pool.root.1
[2026-03-10 03:34:39] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:20 start_atlas.sh
[2026-03-10 03:34:39] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:20 shared
[2026-03-10 03:34:39] -rw-r--r--. 2 boinc boinc    597957 Mar 10 02:20 input.tar.gz
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:20 boinc_lockfile
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc      2564 Mar 10 02:20 pandaJob.out
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc   1002338 Mar 10 02:20 agis_schedconf.cvmfs.json
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc   1511578 Mar 10 02:20 agis_ddmendpoints.agis.ALL.json
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc       444 Mar 10 02:20 workernode_map.json
[2026-03-10 03:34:39] drwx------. 5 boinc boinc      4096 Mar 10 02:20 pilot3
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc 183946709 Mar 10 03:33 HITS.48955006._031485.pool.root.1
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc      1030 Mar 10 03:33 memory_monitor_summary.json
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc    265690 Mar 10 03:33 log.48955006._031485.job.log.tgz.1
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc      6348 Mar 10 03:34 heartbeat.json
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc       530 Mar 10 03:34 boinc_task_state.xml
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc        95 Mar 10 03:34 pilot_heartbeat.json
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc      8192 Mar 10 03:34 boinc_mmap_file
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc        27 Mar 10 03:34 wrapper_checkpoint.txt
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc      5015 Mar 10 03:34 pilotlog.txt
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc    656678 Mar 10 03:34 log.48955006._031485.job.log.1
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc       357 Mar 10 03:34 output.list
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc       620 Mar 10 03:34 runtime_log
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc    942080 Mar 10 03:34 result.tar.gz
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc      9204 Mar 10 03:34 runtime_log.err
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc       662 Mar 10 03:34 DaJMDmp1gJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAKbLDmI2BXNn.diag
[2026-03-10 03:34:39] -rw-r--r--. 1 boinc boinc     22605 Mar 10 03:34 stderr.txt
[2026-03-10 03:34:39] HITS file was successfully produced:
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc 183946709 Mar 10 03:33 shared/HITS.pool.root.1
[2026-03-10 03:34:39]  *** Contents of shared directory: ***
[2026-03-10 03:34:39] total 610400
[2026-03-10 03:34:39] -rw-r--r--. 2 boinc boinc 439536831 Mar 10 02:20 ATLAS.root_0
[2026-03-10 03:34:39] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:20 start_atlas.sh
[2026-03-10 03:34:39] -rw-r--r--. 2 boinc boinc    597957 Mar 10 02:20 input.tar.gz
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc 183946709 Mar 10 03:33 HITS.pool.root.1
[2026-03-10 03:34:39] -rw-------. 1 boinc boinc    942080 Mar 10 03:34 result.tar.gz
03:34:41 (1493087): run_atlas exited; CPU time 17060.662712
03:34:41 (1493087): called boinc_finish(0)

</stderr_txt>
]]>

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