Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:51:03 (2655977): wrapper (7.7.26015): starting
21:51:03 (2655977): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 21:51:03] Arguments: --nthreads 4
[2026-03-09 21:51:03] Threads: 4
[2026-03-09 21:51:03] Checking for CVMFS
[2026-03-09 21:51:03] No cvmfs_config command found, will try listing directly
[2026-03-09 21:51:03] CVMFS is ok
[2026-03-09 21:51:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 21:51:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 21:51:03] Further information can be found at the LHC@home message board.
[2026-03-09 21:51:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 21:51:03] Checking for apptainer binary...
[2026-03-09 21:51:03] which: no apptainer in ((null))
[2026-03-09 21:51:03] apptainer is not installed, using version from CVMFS
[2026-03-09 21:51:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 21:51:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 21:51:03] apptainer works
[2026-03-09 21:51:03] Set ATHENA_PROC_NUMBER=4
[2026-03-09 21:51:03] Set ATHENA_CORE_NUMBER=4
[2026-03-09 21:51:03] Starting ATLAS job with PandaID=7046815975
[2026-03-09 21:51:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 00:47:37]  *** The last 200 lines of the pilot log: ***
[2026-03-10 00:47:37] 2026-03-09 23:46:58,179 | INFO     | total number of processed events: 400 (read)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,197 | INFO     | using path: /var/lib/boinc/var/slot68/slots/4/PanDA_Pilot-7046815975/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,198 | INFO     | extracted standard info from prmon json
[2026-03-10 00:47:37] 2026-03-09 23:46:58,198 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 00:47:37] 2026-03-09 23:46:58,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 00:47:37] 2026-03-09 23:46:58,198 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 00:47:37] 2026-03-09 23:46:58,198 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 00:47:37] 2026-03-09 23:46:58,201 | INFO     | fitting pss+swap vs Time
[2026-03-10 00:47:37] 2026-03-09 23:46:58,201 | INFO     | sum of square deviations: 1605470102.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,202 | INFO     | sum of deviations: 9993433153.000025
[2026-03-10 00:47:37] 2026-03-09 23:46:58,202 | INFO     | mean x: 1773094741.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,202 | INFO     | mean y: 2319584.6878612717
[2026-03-10 00:47:37] 2026-03-09 23:46:58,202 | INFO     | intersect: -11034512397.449787
[2026-03-10 00:47:37] 2026-03-09 23:46:58,202 | INFO     | chi2: 1.9716224418182473
[2026-03-10 00:47:37] 2026-03-09 23:46:58,202 | INFO     | sum of square deviations: 1470248962.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,203 | INFO     | sum of deviations: 20811361277.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,203 | INFO     | mean x: 1773094588.5
[2026-03-10 00:47:37] 2026-03-09 23:46:58,203 | INFO     | mean y: 2331484.869047619
[2026-03-10 00:47:37] 2026-03-09 23:46:58,203 | INFO     | intersect: -25095807002.758835
[2026-03-10 00:47:37] 2026-03-09 23:46:58,203 | INFO     | chi2: 1.1021618009493055
[2026-03-10 00:47:37] 2026-03-09 23:46:58,203 | INFO     | current chi2=1.1021618009493055 (change=44.09873931375612 %)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,203 | INFO     | sum of square deviations: 1342841922.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | sum of deviations: 20062990279.999996
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | mean x: 1773094436.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | mean y: 2330588.8466257667
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | intersect: -26488930856.139805
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | chi2: 1.1027639731866699
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | current chi2=1.1027639731866699 (change=-0.05463555685251512 %)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | right removable region: 162
[2026-03-10 00:47:37] 2026-03-09 23:46:58,204 | INFO     | sum of square deviations: 1470248962.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,205 | INFO     | sum of deviations: -7490409234.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,205 | INFO     | mean x: 1773094893.5
[2026-03-10 00:47:37] 2026-03-09 23:46:58,205 | INFO     | mean y: 2338965.0476190476
[2026-03-10 00:47:37] 2026-03-09 23:46:58,205 | INFO     | intersect: 9035643327.979485
[2026-03-10 00:47:37] 2026-03-09 23:46:58,205 | INFO     | chi2: 0.8917724546294203
[2026-03-10 00:47:37] 2026-03-09 23:46:58,205 | INFO     | current chi2=0.8917724546294203 (change=54.7696133034974 %)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,205 | INFO     | sum of square deviations: 1342841922.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | sum of deviations: -8101334664.999999
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | mean x: 1773095046.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | mean y: 2339692.392638037
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | intersect: 10699381633.938135
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | chi2: 0.8915766414638912
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | current chi2=0.8915766414638912 (change=0.021957749929668053 %)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | left removable region: 20
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | sum of square deviations: 887813855.5
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | sum of deviations: 2261634109.0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | mean x: 1773095015.5
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | mean y: 2352843.732394366
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | intersect: -4514463536.987723
[2026-03-10 00:47:37] 2026-03-09 23:46:58,206 | INFO     | chi2: 0.00025043313715924055
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | current memory leak: 2.55 B/s (using 142 data points, chi2=0.00)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | could have reported an average CPU frequency of 3597 MHz (9 samples)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | ..............................
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . Timing measurements:
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . get job = 0 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . initial setup = 4 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . payload setup = 4 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . stage-in = 0 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . payload execution = 10521 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . stage-out = 0 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | . log creation = 0 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,207 | INFO     | ..............................
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | 
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | job summary report
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | --------------------------------------------------
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | PanDA job id: 7046815975
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | task id: 48967067
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | errors: (none)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | pilot state: finished 
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | transexitcode: 0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | exeerrorcode: 0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,724 | INFO     | exeerrordiag: 
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | exitcode: 0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | exitmsg: OK
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | cpuconsumptiontime: 40848 s
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | nevents: 400
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | neventsw: 0
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | pid: 2666247
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | pgrp: 2666247
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | corecount: 4
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | event service: False
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | sizes: {0: 2280237, 11: 2280237, 10529: 2318039, 10530: 2318039, 10532: 2318297}
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | --------------------------------------------------
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | 
[2026-03-10 00:47:37] 2026-03-09 23:46:58,725 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/4
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | job 7046815975 has completed (purged errors)
[2026-03-10 00:47:37] 2026-03-09 23:46:58,746 | INFO     | overall cleanup function is called
[2026-03-10 00:47:37] 2026-03-09 23:46:58,938 | INFO     | PID=2660533 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 00:47:37] 2026-03-09 23:46:58,939 | INFO     | .. there are 57 such processes running
[2026-03-10 00:47:37] 2026-03-09 23:46:59,758 | INFO     | --- collectZombieJob: --- 10, [2666247]
[2026-03-10 00:47:37] 2026-03-09 23:46:59,758 | INFO     | zombie collector waiting for pid 2666247
[2026-03-10 00:47:37] 2026-03-09 23:46:59,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 00:47:37] 2026-03-09 23:46:59,758 | INFO     | collected zombie processes
[2026-03-10 00:47:37] 2026-03-09 23:46:59,758 | INFO     | will attempt to kill all subprocesses of pid=2666247
[2026-03-10 00:47:37] 2026-03-09 23:47:00,172 | INFO     | process IDs to be killed: [2666247] (in reverse order)
[2026-03-10 00:47:37] 2026-03-09 23:47:00,389 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 00:47:37] 2026-03-09 23:47:00,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 00:47:37] 2026-03-09 23:47:00,413 | INFO     | did not find any defunct processes belonging to 2666247
[2026-03-10 00:47:37] 2026-03-09 23:47:00,436 | INFO     | did not find any defunct processes belonging to 2666247
[2026-03-10 00:47:37] 2026-03-09 23:47:00,436 | INFO     | ready for new job
[2026-03-10 00:47:37] 2026-03-09 23:47:00,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 00:47:37] 2026-03-09 23:47:00,438 | INFO     | **************************************
[2026-03-10 00:47:37] 2026-03-09 23:47:00,438 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 00:47:37] 2026-03-09 23:47:00,438 | INFO     | **************************************
[2026-03-10 00:47:37] 2026-03-09 23:47:00,438 | INFO     | 
[2026-03-10 00:47:37] 2026-03-09 23:47:00,443 | INFO     | architecture information:
[2026-03-10 00:47:37] 2026-03-09 23:47:00,443 | INFO     | executing command: cat /etc/os-release
[2026-03-10 00:47:37] 2026-03-09 23:47:00,458 | INFO     | cat /etc/os-release:
[2026-03-10 00:47:37] NAME="CentOS Linux"
[2026-03-10 00:47:37] VERSION="7 (Core)"
[2026-03-10 00:47:37] ID="centos"
[2026-03-10 00:47:37] ID_LIKE="rhel fedora"
[2026-03-10 00:47:37] VERSION_ID="7"
[2026-03-10 00:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 00:47:37] ANSI_COLOR="0;31"
[2026-03-10 00:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 00:47:37] HOME_URL="https://www.centos.org/"
[2026-03-10 00:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 00:47:37] 
[2026-03-10 00:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 00:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 00:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 00:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 00:47:37] 
[2026-03-10 00:47:37] 2026-03-09 23:47:00,458 | INFO     | **************************************
[2026-03-10 00:47:37] 2026-03-09 23:47:00,961 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/4
[2026-03-10 00:47:37] 2026-03-09 23:47:00,975 | INFO     | sufficient remaining disk space (20836253696 B)
[2026-03-10 00:47:37] 2026-03-09 23:47:00,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 00:47:37] 2026-03-09 23:47:00,976 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 00:47:37] 2026-03-09 23:47:00,976 | INFO     | update_server=False
[2026-03-10 00:47:37] 2026-03-09 23:47:00,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 00:47:37] 2026-03-09 23:47:01,098 | INFO     | job.realtimelogging is not enabled
[2026-03-10 00:47:37] 2026-03-09 23:47:01,152 | INFO     | all job control threads have been joined
[2026-03-10 00:47:37] 2026-03-09 23:47:01,170 | INFO     | all data control threads have been joined
[2026-03-10 00:47:37] 2026-03-09 23:47:01,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 00:47:37] 2026-03-09 23:47:01,617 | INFO     | all payload control threads have been joined
[2026-03-10 00:47:37] 2026-03-09 23:47:01,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 00:47:37] 2026-03-09 23:47:01,797 | INFO     | aborting loop
[2026-03-10 00:47:37] 2026-03-09 23:47:01,981 | INFO     | [job] retrieve thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,100 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,103 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,157 | INFO     | [job] control thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,175 | INFO     | [data] control thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 00:47:37] 2026-03-09 23:47:02,530 | INFO     | [payload] validate_post thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,618 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,622 | INFO     | [payload] control thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,666 | INFO     | [job] validate thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,739 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,802 | INFO     | [job] job monitor thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:02,860 | INFO     | [data] copytool_in thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:03,179 | INFO     | [data] copytool_out thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:03,195 | INFO     | [payload] failed_post thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:03,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 00:47:37] 2026-03-09 23:47:04,273 | INFO     | [job] queue monitor thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:06,467 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 00:47:37] 2026-03-09 23:47:31,361 | INFO     | [monitor] cgroup control has ended
[2026-03-10 00:47:37] 2026-03-09 23:47:31,470 | INFO     | PID=2660533 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 00:47:37] 2026-03-09 23:47:31,471 | INFO     | .. there are 57 such processes running
[2026-03-10 00:47:37] 2026-03-09 23:47:31,471 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 00:47:37] 2026-03-09 23:47:31,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 00:47:37] 2026-03-09 23:47:31,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 00:47:37] 2026-03-09 23:47:31,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23399172761408)>', '<ExcThread(monitor, started 23398920210176)>']
[2026-03-10 00:47:37] 2026-03-09 23:47:32,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 00:47:37] 2026-03-09 23:47:32,476 | INFO     | [monitor] control thread has ended
[2026-03-10 00:47:37] 2026-03-09 23:47:36,703 | INFO     | all workflow threads have been joined
[2026-03-10 00:47:37] 2026-03-09 23:47:36,703 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 00:47:37] 2026-03-09 23:47:36,703 | INFO     | traces error code: 0
[2026-03-10 00:47:37] 2026-03-09 23:47:36,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 00:47:37] 2026-03-09 23:47:36,823 [wrapper] ==== pilot stdout END ====
[2026-03-10 00:47:37] 2026-03-09 23:47:36,826 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 00:47:37] 2026-03-09 23:47:36,829 [wrapper] pilotpid: 2660533
[2026-03-10 00:47:37] 2026-03-09 23:47:36,831 [wrapper] Pilot exit status: 0
[2026-03-10 00:47:37] 2026-03-09 23:47:36,841 [wrapper] pandaids: 7046815975
[2026-03-10 00:47:37] 2026-03-09 23:47:36,954 [wrapper] cleanup supervisor_pilot  333943 2660534
[2026-03-10 00:47:37] 2026-03-09 23:47:36,957 [wrapper] Test setup, not cleaning
[2026-03-10 00:47:37] 2026-03-09 23:47:36,959 [wrapper] apfmon messages muted
[2026-03-10 00:47:37] 2026-03-09 23:47:36,961 [wrapper] ==== wrapper stdout END ====
[2026-03-10 00:47:37] 2026-03-09 23:47:36,963 [wrapper] ==== wrapper stderr END ====
[2026-03-10 00:47:37]  *** Error codes and diagnostics ***
[2026-03-10 00:47:37]     "exeErrorCode": 0,
[2026-03-10 00:47:37]     "exeErrorDiag": "",
[2026-03-10 00:47:37]     "pilotErrorCode": 0,
[2026-03-10 00:47:37]     "pilotErrorDiag": "",
[2026-03-10 00:47:37]  *** Listing of results directory ***
[2026-03-10 00:47:37] total 505412
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-10 00:47:37] -rwx------. 1 boinc boinc     36322 Mar  9 04:55 runpilot2-wrapper.sh
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc      5111 Mar  9 04:56 queuedata.json
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc       100 Mar  9 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 00:47:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 21:50 run_atlas
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc       105 Mar  9 21:50 job.xml
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc      6707 Mar  9 21:51 init_data.xml
[2026-03-10 00:47:37] -rw-r--r--. 2 boinc boinc 235885644 Mar  9 21:51 EVNT.48967065._000009.pool.root.1
[2026-03-10 00:47:37] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:51 start_atlas.sh
[2026-03-10 00:47:37] drwxrwx--x. 2 boinc boinc      4096 Mar  9 21:51 shared
[2026-03-10 00:47:37] -rw-r--r--. 2 boinc boinc    597982 Mar  9 21:51 input.tar.gz
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc         0 Mar  9 21:51 boinc_lockfile
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc      2613 Mar  9 21:51 pandaJob.out
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc   1002738 Mar  9 21:51 agis_schedconf.cvmfs.json
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc   1511578 Mar  9 21:51 agis_ddmendpoints.agis.ALL.json
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc       444 Mar  9 21:51 workernode_map.json
[2026-03-10 00:47:37] drwx------. 5 boinc boinc      4096 Mar  9 21:51 pilot3
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc 274007895 Mar 10 00:46 HITS.48967067._000244.pool.root.1
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc       530 Mar 10 00:46 boinc_task_state.xml
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc      1034 Mar 10 00:46 memory_monitor_summary.json
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc        95 Mar 10 00:46 pilot_heartbeat.json
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc    355407 Mar 10 00:46 log.48967067._000244.job.log.tgz.1
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc      6353 Mar 10 00:46 heartbeat.json
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc      8192 Mar 10 00:47 boinc_mmap_file
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc        28 Mar 10 00:47 wrapper_checkpoint.txt
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc      4901 Mar 10 00:47 pilotlog.txt
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc   1500833 Mar 10 00:47 log.48967067._000244.job.log.1
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc       357 Mar 10 00:47 output.list
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc       620 Mar 10 00:47 runtime_log
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc   1873920 Mar 10 00:47 result.tar.gz
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc      9205 Mar 10 00:47 runtime_log.err
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc       665 Mar 10 00:47 nJBODmQtgJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFhYLDmXYJnkm.diag
[2026-03-10 00:47:37] -rw-r--r--. 1 boinc boinc     20891 Mar 10 00:47 stderr.txt
[2026-03-10 00:47:37] HITS file was successfully produced:
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc 274007895 Mar 10 00:46 shared/HITS.pool.root.1
[2026-03-10 00:47:37]  *** Contents of shared directory: ***
[2026-03-10 00:47:37] total 500388
[2026-03-10 00:47:37] -rw-r--r--. 2 boinc boinc 235885644 Mar  9 21:51 ATLAS.root_0
[2026-03-10 00:47:37] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:51 start_atlas.sh
[2026-03-10 00:47:37] -rw-r--r--. 2 boinc boinc    597982 Mar  9 21:51 input.tar.gz
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc 274007895 Mar 10 00:46 HITS.pool.root.1
[2026-03-10 00:47:37] -rw-------. 1 boinc boinc   1873920 Mar 10 00:47 result.tar.gz
00:47:38 (2655977): run_atlas exited; CPU time 41315.677987
00:47:38 (2655977): called boinc_finish(0)

</stderr_txt>
]]>

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