Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:17:33 (1464085): wrapper (7.7.26015): starting
07:17:33 (1464085): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 07:17:33] Arguments: --nthreads 4
[2026-03-10 07:17:33] Threads: 4
[2026-03-10 07:17:33] Checking for CVMFS
[2026-03-10 07:17:33] No cvmfs_config command found, will try listing directly
[2026-03-10 07:17:33] CVMFS is ok
[2026-03-10 07:17:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 07:17:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 07:17:33] Further information can be found at the LHC@home message board.
[2026-03-10 07:17:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 07:17:33] Checking for apptainer binary...
[2026-03-10 07:17:33] which: no apptainer in ((null))
[2026-03-10 07:17:33] apptainer is not installed, using version from CVMFS
[2026-03-10 07:17:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 07:17:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 07:17:34] apptainer works
[2026-03-10 07:17:34] Set ATHENA_PROC_NUMBER=4
[2026-03-10 07:17:34] Set ATHENA_CORE_NUMBER=4
[2026-03-10 07:17:34] Starting ATLAS job with PandaID=7046835467
[2026-03-10 07:17:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:56:02]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:56:02]  scope=mc23_13p6TeV
[2026-03-10 08:56:02]  status=None
[2026-03-10 08:56:02]  status_code=0
[2026-03-10 08:56:02]  storage_token=
[2026-03-10 08:56:02]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/log.48966988._022382.job.log.tgz.1
[2026-03-10 08:56:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/02/log.48966988._022382.job.log.tgz.1
[2026-03-10 08:56:02]  workdir=None
[2026-03-10 08:56:02] ]
[2026-03-10 08:56:02] 2026-03-10 07:55:21,573 | INFO     | transferring file log.48966988._022382.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/log.48966988._022382.job.log.tgz.1 to /var/lib/
[2026-03-10 08:56:02] 2026-03-10 07:55:21,573 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/log.48966988._022382.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-10 08:56:02] 2026-03-10 07:55:21,589 | INFO     | adding to output.list: log.48966988._022382.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/02/log.48966988._022382.job.log.tg
[2026-03-10 08:56:02] 2026-03-10 07:55:21,590 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 08:56:02] 2026-03-10 07:55:21,590 | INFO     | summary of transferred files:
[2026-03-10 08:56:02] 2026-03-10 07:55:21,590 | INFO     |  -- lfn=log.48966988._022382.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 08:56:02] 2026-03-10 07:55:21,590 | INFO     | stage-out finished correctly
[2026-03-10 08:56:02] 2026-03-10 07:55:21,890 | WARNING  | process 1474730 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 08:56:02] 2026-03-10 07:55:21,890 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:56:02] 2026-03-10 07:55:21,891 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2277235 B
[2026-03-10 08:56:02] 2026-03-10 07:55:21,891 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15857 B
[2026-03-10 08:56:02] 2026-03-10 07:55:21,891 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-10 08:56:02] 2026-03-10 07:55:21,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 08:56:02] 2026-03-10 07:55:21,915 | INFO     | sufficient remaining disk space (19670237184 B)
[2026-03-10 08:56:02] 2026-03-10 07:55:21,931 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-10 08:56:02] 2026-03-10 07:55:21,942 | INFO     | size of work directory /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467: 2584382 B (within 5033164800 B limit)
[2026-03-10 08:56:02] 2026-03-10 07:55:21,942 | INFO     | pfn file=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/HITS.48966988._022382.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-10 08:56:02] 2026-03-10 07:55:21,942 | INFO     | total size of present files: 0 B (workdir size: 2584382 B)
[2026-03-10 08:56:02] 2026-03-10 07:55:21,949 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/HITS.48966988._022382.pool.root.1 since it does not exist
[2026-03-10 08:56:02] 2026-03-10 07:55:22,378 | INFO     | number of running child processes to parent process 1474730: 1
[2026-03-10 08:56:02] 2026-03-10 07:55:22,378 | INFO     | maximum number of monitored processes: 6
[2026-03-10 08:56:02] 2026-03-10 07:55:22,670 | INFO     | time since job start (5856s) is within the limit (349056.0s)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,463 | INFO     | job 7046835467 has state=finished
[2026-03-10 08:56:02] 2026-03-10 07:55:24,463 | INFO     | preparing for final server update for job 7046835467 in state='finished'
[2026-03-10 08:56:02] 2026-03-10 07:55:24,463 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/jobReport.json
[2026-03-10 08:56:02] 2026-03-10 07:55:24,464 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-10 08:56:02] 2026-03-10 07:55:24,465 | INFO     | this job has now completed (state=finished)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,465 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,465 | INFO     | log transfer has been attempted: DONE
[2026-03-10 08:56:02] 2026-03-10 07:55:24,465 | INFO     | job 7046835467 has finished - writing final server update
[2026-03-10 08:56:02] 2026-03-10 07:55:24,465 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_60020/.job.ad'
[2026-03-10 08:56:02] 2026-03-10 07:55:24,465 | INFO     | total number of processed events: 400 (read)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,482 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7046835467/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,483 | INFO     | extracted standard info from prmon json
[2026-03-10 08:56:02] 2026-03-10 07:55:24,483 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 08:56:02] 2026-03-10 07:55:24,483 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 08:56:02] 2026-03-10 07:55:24,483 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 08:56:02] 2026-03-10 07:55:24,483 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 08:56:02] 2026-03-10 07:55:24,484 | INFO     | fitting pss+swap vs Time
[2026-03-10 08:56:02] 2026-03-10 07:55:24,484 | INFO     | sum of square deviations: 218571540.0
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | sum of deviations: -1382906966.0000002
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | mean x: 1773126475.0
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | mean y: 2336369.786516854
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | intersect: 11220946779.341782
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | chi2: 0.00037871022786109055
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | current memory leak: -6.33 B/s (using 89 data points, chi2=0.00)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | could have reported an average CPU frequency of 3558 MHz (7 samples)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | ..............................
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . Timing measurements:
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . get job = 0 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . initial setup = 4 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . payload setup = 4 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . stage-in = 0 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . payload execution = 5835 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . stage-out = 0 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | . log creation = 0 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,485 | INFO     | ..............................
[2026-03-10 08:56:02] 2026-03-10 07:55:24,532 | INFO     | 
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | job summary report
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | --------------------------------------------------
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | PanDA job id: 7046835467
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | task id: 48966988
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | errors: (none)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | pilot state: finished 
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | transexitcode: 0
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | exeerrorcode: 0
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | exeerrordiag: 
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | exitcode: 0
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | exitmsg: OK
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | cpuconsumptiontime: 22456 s
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | nevents: 400
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | neventsw: 0
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | pid: 1474730
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | pgrp: 1474730
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | corecount: 4
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | event service: False
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | sizes: {0: 2280021, 1: 2280311, 11: 2280311, 5844: 2316067, 5845: 2316067, 5847: 2316289}
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | --------------------------------------------------
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | 
[2026-03-10 08:56:02] 2026-03-10 07:55:24,533 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-10 08:56:02] 2026-03-10 07:55:24,555 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | job 7046835467 has completed (purged errors)
[2026-03-10 08:56:02] 2026-03-10 07:55:24,556 | INFO     | overall cleanup function is called
[2026-03-10 08:56:02] 2026-03-10 07:55:25,563 | INFO     | --- collectZombieJob: --- 10, [1474730]
[2026-03-10 08:56:02] 2026-03-10 07:55:25,563 | INFO     | zombie collector waiting for pid 1474730
[2026-03-10 08:56:02] 2026-03-10 07:55:25,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:56:02] 2026-03-10 07:55:25,564 | INFO     | collected zombie processes
[2026-03-10 08:56:02] 2026-03-10 07:55:25,564 | INFO     | will attempt to kill all subprocesses of pid=1474730
[2026-03-10 08:56:02] 2026-03-10 07:55:25,988 | INFO     | process IDs to be killed: [1474730] (in reverse order)
[2026-03-10 08:56:02] 2026-03-10 07:55:26,198 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:56:02] 2026-03-10 07:55:26,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:56:02] 2026-03-10 07:55:26,225 | INFO     | did not find any defunct processes belonging to 1474730
[2026-03-10 08:56:02] 2026-03-10 07:55:26,250 | INFO     | did not find any defunct processes belonging to 1474730
[2026-03-10 08:56:02] 2026-03-10 07:55:26,250 | INFO     | ready for new job
[2026-03-10 08:56:02] 2026-03-10 07:55:26,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:56:02] 2026-03-10 07:55:26,252 | INFO     | **************************************
[2026-03-10 08:56:02] 2026-03-10 07:55:26,252 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:56:02] 2026-03-10 07:55:26,252 | INFO     | **************************************
[2026-03-10 08:56:02] 2026-03-10 07:55:26,252 | INFO     | 
[2026-03-10 08:56:02] 2026-03-10 07:55:26,257 | INFO     | architecture information:
[2026-03-10 08:56:02] 2026-03-10 07:55:26,258 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:56:02] 2026-03-10 07:55:26,270 | INFO     | cat /etc/os-release:
[2026-03-10 08:56:02] NAME="CentOS Linux"
[2026-03-10 08:56:02] VERSION="7 (Core)"
[2026-03-10 08:56:02] ID="centos"
[2026-03-10 08:56:02] ID_LIKE="rhel fedora"
[2026-03-10 08:56:02] VERSION_ID="7"
[2026-03-10 08:56:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:56:02] ANSI_COLOR="0;31"
[2026-03-10 08:56:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:56:02] HOME_URL="https://www.centos.org/"
[2026-03-10 08:56:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:56:02] 
[2026-03-10 08:56:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:56:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:56:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:56:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:56:02] 
[2026-03-10 08:56:02] 2026-03-10 07:55:26,270 | INFO     | **************************************
[2026-03-10 08:56:02] 2026-03-10 07:55:26,773 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-10 08:56:02] 2026-03-10 07:55:26,788 | INFO     | sufficient remaining disk space (20109590528 B)
[2026-03-10 08:56:02] 2026-03-10 07:55:26,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:56:02] 2026-03-10 07:55:26,788 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:56:02] 2026-03-10 07:55:26,788 | INFO     | update_server=False
[2026-03-10 08:56:02] 2026-03-10 07:55:26,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:56:02] 2026-03-10 07:55:26,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:56:02] 2026-03-10 07:55:26,788 | INFO     | aborting loop
[2026-03-10 08:56:02] 2026-03-10 07:55:26,789 | INFO     | all data control threads have been joined
[2026-03-10 08:56:02] 2026-03-10 07:55:26,872 | INFO     | all job control threads have been joined
[2026-03-10 08:56:02] 2026-03-10 07:55:27,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:56:02] 2026-03-10 07:55:27,794 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:27,794 | INFO     | [data] control thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:27,796 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:27,878 | INFO     | [job] control thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:27,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:56:02] 2026-03-10 07:55:27,984 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:28,286 | INFO     | all payload control threads have been joined
[2026-03-10 08:56:02] 2026-03-10 07:55:28,444 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:28,484 | INFO     | [job] validate thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:28,484 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:28,596 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:28,620 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:28,650 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:28,904 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:29,152 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:29,291 | INFO     | [payload] control thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:29,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:56:02] 2026-03-10 07:55:30,545 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:31,960 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:56:02] 2026-03-10 07:55:55,583 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:56:02] 2026-03-10 07:55:56,218 | INFO     | PID=1468954 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 08:56:02] 2026-03-10 07:55:56,218 | INFO     | .. there are 59 such processes running
[2026-03-10 08:56:02] 2026-03-10 07:55:56,219 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:56:02] 2026-03-10 07:55:56,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:56:02] 2026-03-10 07:55:56,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:56:02] 2026-03-10 07:55:57,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22387057448768)>', '<ExcThread(monitor, started 22386811598592)>']
[2026-03-10 08:56:02] 2026-03-10 07:55:58,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:56:02] 2026-03-10 07:55:58,229 | INFO     | [monitor] control thread has ended
[2026-03-10 08:56:02] 2026-03-10 07:56:02,665 | INFO     | all workflow threads have been joined
[2026-03-10 08:56:02] 2026-03-10 07:56:02,666 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:56:02] 2026-03-10 07:56:02,666 | INFO     | traces error code: 0
[2026-03-10 08:56:02] 2026-03-10 07:56:02,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:56:02] 2026-03-10 07:56:02,802 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:56:02] 2026-03-10 07:56:02,804 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:56:02] 2026-03-10 07:56:02,806 [wrapper] pilotpid: 1468954
[2026-03-10 08:56:02] 2026-03-10 07:56:02,808 [wrapper] Pilot exit status: 0
[2026-03-10 08:56:02] 2026-03-10 07:56:02,815 [wrapper] pandaids: 7046835467
[2026-03-10 08:56:02] 2026-03-10 07:56:02,926 [wrapper] cleanup supervisor_pilot 2482113 1468955
[2026-03-10 08:56:02] 2026-03-10 07:56:02,928 [wrapper] Test setup, not cleaning
[2026-03-10 08:56:02] 2026-03-10 07:56:02,930 [wrapper] apfmon messages muted
[2026-03-10 08:56:02] 2026-03-10 07:56:02,932 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:56:02] 2026-03-10 07:56:02,935 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:56:02]  *** Error codes and diagnostics ***
[2026-03-10 08:56:02]     "exeErrorCode": 0,
[2026-03-10 08:56:02]     "exeErrorDiag": "",
[2026-03-10 08:56:02]     "pilotErrorCode": 0,
[2026-03-10 08:56:02]     "pilotErrorDiag": "",
[2026-03-10 08:56:02]  *** Listing of results directory ***
[2026-03-10 08:56:02] total 401584
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc    584627 Mar  9 04:54 pilot3.tar.gz
[2026-03-10 08:56:02] -rwx------. 1 boinc boinc     36322 Mar  9 04:55 runpilot2-wrapper.sh
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc      5111 Mar  9 04:56 queuedata.json
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc       100 Mar 10 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:56:02] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 07:17 run_atlas
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc       105 Mar 10 07:17 job.xml
[2026-03-10 08:56:02] -rw-r--r--. 2 boinc boinc 212867490 Mar 10 07:17 EVNT.48966985._000876.pool.root.1
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc      6707 Mar 10 07:17 init_data.xml
[2026-03-10 08:56:02] -rw-r--r--. 2 boinc boinc     15845 Mar 10 07:17 start_atlas.sh
[2026-03-10 08:56:02] drwxrwx--x. 2 boinc boinc      4096 Mar 10 07:17 shared
[2026-03-10 08:56:02] -rw-r--r--. 2 boinc boinc    597976 Mar 10 07:17 input.tar.gz
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc         0 Mar 10 07:17 boinc_lockfile
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc      2592 Mar 10 07:17 pandaJob.out
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc   1005065 Mar 10 07:17 agis_schedconf.cvmfs.json
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc   1511578 Mar 10 07:17 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc       445 Mar 10 07:17 workernode_map.json
[2026-03-10 08:56:02] drwx------. 5 boinc boinc      4096 Mar 10 07:17 pilot3
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc 192159369 Mar 10 08:54 HITS.48966988._022382.pool.root.1
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc       529 Mar 10 08:54 boinc_task_state.xml
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc      1031 Mar 10 08:55 memory_monitor_summary.json
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc    279977 Mar 10 08:55 log.48966988._022382.job.log.tgz.1
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc      6356 Mar 10 08:55 heartbeat.json
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc      8192 Mar 10 08:55 boinc_mmap_file
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc        27 Mar 10 08:55 wrapper_checkpoint.txt
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc        95 Mar 10 08:55 pilot_heartbeat.json
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc      4830 Mar 10 08:56 pilotlog.txt
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc    850779 Mar 10 08:56 log.48966988._022382.job.log.1
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc       357 Mar 10 08:56 output.list
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc       620 Mar 10 08:56 runtime_log
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc   1146880 Mar 10 08:56 result.tar.gz
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc      9221 Mar 10 08:56 runtime_log.err
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc       662 Mar 10 08:56 InrNDmQtgJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlFbLDmapbzrm.diag
[2026-03-10 08:56:02] -rw-r--r--. 1 boinc boinc     22150 Mar 10 08:56 stderr.txt
[2026-03-10 08:56:02] HITS file was successfully produced:
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc 192159369 Mar 10 08:54 shared/HITS.pool.root.1
[2026-03-10 08:56:02]  *** Contents of shared directory: ***
[2026-03-10 08:56:02] total 397264
[2026-03-10 08:56:02] -rw-r--r--. 2 boinc boinc 212867490 Mar 10 07:17 ATLAS.root_0
[2026-03-10 08:56:02] -rw-r--r--. 2 boinc boinc     15845 Mar 10 07:17 start_atlas.sh
[2026-03-10 08:56:02] -rw-r--r--. 2 boinc boinc    597976 Mar 10 07:17 input.tar.gz
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc 192159369 Mar 10 08:54 HITS.pool.root.1
[2026-03-10 08:56:02] -rw-------. 1 boinc boinc   1146880 Mar 10 08:56 result.tar.gz
08:56:04 (1464085): run_atlas exited; CPU time 22693.236494
08:56:04 (1464085): called boinc_finish(0)

</stderr_txt>
]]>

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