Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:23:19 (4083911): wrapper (7.7.26015): starting
23:23:19 (4083911): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 23:23:19] Arguments: --nthreads 4
[2026-03-09 23:23:19] Threads: 4
[2026-03-09 23:23:19] Checking for CVMFS
[2026-03-09 23:23:19] No cvmfs_config command found, will try listing directly
[2026-03-09 23:23:19] CVMFS is ok
[2026-03-09 23:23:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 23:23:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 23:23:19] Further information can be found at the LHC@home message board.
[2026-03-09 23:23:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 23:23:19] Checking for apptainer binary...
[2026-03-09 23:23:19] which: no apptainer in ((null))
[2026-03-09 23:23:19] apptainer is not installed, using version from CVMFS
[2026-03-09 23:23:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 23:23:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 23:23:19] apptainer works
[2026-03-09 23:23:19] Set ATHENA_PROC_NUMBER=4
[2026-03-09 23:23:19] Set ATHENA_CORE_NUMBER=4
[2026-03-09 23:23:19] Starting ATLAS job with PandaID=7046648499
[2026-03-09 23:23:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 01:04:49]  *** The last 200 lines of the pilot log: ***
[2026-03-10 01:04:49]  replicas=None
[2026-03-10 01:04:49]  scope=mc23_13p6TeV
[2026-03-10 01:04:49]  status=None
[2026-03-10 01:04:49]  status_code=0
[2026-03-10 01:04:49]  storage_token=
[2026-03-10 01:04:49]  surl=/var/lib/boinc/var/slot76/slots/3/PanDA_Pilot-7046648499/log.48966988._020223.job.log.tgz.1
[2026-03-10 01:04:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/f0/log.48966988._020223.job.log.tgz.1
[2026-03-10 01:04:49]  workdir=None
[2026-03-10 01:04:49] ]
[2026-03-10 01:04:49] 2026-03-10 00:03:43,927 | INFO     | transferring file log.48966988._020223.job.log.tgz.1 from /var/lib/boinc/var/slot76/slots/3/PanDA_Pilot-7046648499/log.48966988._020223.job.log.tgz.1 to /var/lib/b
[2026-03-10 01:04:49] 2026-03-10 00:03:43,927 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot76/slots/3/PanDA_Pilot-7046648499/log.48966988._020223.job.log.tgz.1 /var/lib/boinc/var/slot76/slots/3/lo
[2026-03-10 01:04:49] 2026-03-10 00:03:43,942 | INFO     | adding to output.list: log.48966988._020223.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/f0/log.48966988._020223.job.log.tg
[2026-03-10 01:04:49] 2026-03-10 00:03:43,942 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 01:04:49] 2026-03-10 00:03:43,942 | INFO     | summary of transferred files:
[2026-03-10 01:04:49] 2026-03-10 00:03:43,942 | INFO     |  -- lfn=log.48966988._020223.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 01:04:49] 2026-03-10 00:03:43,942 | INFO     | stage-out finished correctly
[2026-03-10 01:04:49] 2026-03-10 00:03:43,994 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 01:04:49] 2026-03-10 00:03:44,913 | INFO     | job 7046648499 has state=finished
[2026-03-10 01:04:49] 2026-03-10 00:03:44,913 | INFO     | preparing for final server update for job 7046648499 in state='finished'
[2026-03-10 01:04:49] 2026-03-10 00:03:44,913 | INFO     | reading metadata from: /var/lib/boinc/var/slot76/slots/3/PanDA_Pilot-7046648499/jobReport.json
[2026-03-10 01:04:49] 2026-03-10 00:03:44,914 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot76/slots/3/workernode_map.json
[2026-03-10 01:04:49] 2026-03-10 00:03:44,914 | INFO     | this job has now completed (state=finished)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,914 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,915 | INFO     | log transfer has been attempted: DONE
[2026-03-10 01:04:49] 2026-03-10 00:03:44,915 | INFO     | job 7046648499 has finished - writing final server update
[2026-03-10 01:04:49] 2026-03-10 00:03:44,915 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4004238/.job.ad'
[2026-03-10 01:04:49] 2026-03-10 00:03:44,915 | INFO     | total number of processed events: 400 (read)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,932 | INFO     | using path: /var/lib/boinc/var/slot76/slots/3/PanDA_Pilot-7046648499/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,933 | INFO     | extracted standard info from prmon json
[2026-03-10 01:04:49] 2026-03-10 00:03:44,933 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 01:04:49] 2026-03-10 00:03:44,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 01:04:49] 2026-03-10 00:03:44,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 01:04:49] 2026-03-10 00:03:44,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 01:04:49] 2026-03-10 00:03:44,934 | INFO     | fitting pss+swap vs Time
[2026-03-10 01:04:49] 2026-03-10 00:03:44,934 | INFO     | sum of square deviations: 241429643.0
[2026-03-10 01:04:49] 2026-03-10 00:03:44,934 | INFO     | sum of deviations: -579679767.0
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | mean x: 1773098115.5
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | mean y: 2327614.304347826
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | intersect: 4259589024.6655397
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | chi2: 0.00019888105714281208
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | current memory leak: -2.40 B/s (using 92 data points, chi2=0.00)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | could have reported an average CPU frequency of 3567 MHz (7 samples)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | ..............................
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . Timing measurements:
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . get job = 0 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . initial setup = 5 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . payload setup = 5 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . stage-in = 0 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . payload execution = 5988 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . stage-out = 0 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | . log creation = 0 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,935 | INFO     | ..............................
[2026-03-10 01:04:49] 2026-03-10 00:03:44,982 | INFO     | 
[2026-03-10 01:04:49] 2026-03-10 00:03:44,982 | INFO     | job summary report
[2026-03-10 01:04:49] 2026-03-10 00:03:44,982 | INFO     | --------------------------------------------------
[2026-03-10 01:04:49] 2026-03-10 00:03:44,982 | INFO     | PanDA job id: 7046648499
[2026-03-10 01:04:49] 2026-03-10 00:03:44,982 | INFO     | task id: 48966988
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | errors: (none)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | pilot state: finished 
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | transexitcode: 0
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | exeerrorcode: 0
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | exeerrordiag: 
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | exitcode: 0
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | exitmsg: OK
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | cpuconsumptiontime: 22956 s
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | nevents: 400
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | neventsw: 0
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | pid: 4094304
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | pgrp: 4094304
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | corecount: 4
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | event service: False
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | sizes: {0: 2280282, 11: 2280282, 5998: 2307071, 5999: 2316147, 6000: 2316285}
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | --------------------------------------------------
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | 
[2026-03-10 01:04:49] 2026-03-10 00:03:44,983 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/3
[2026-03-10 01:04:49] 2026-03-10 00:03:44,998 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | job 7046648499 has completed (purged errors)
[2026-03-10 01:04:49] 2026-03-10 00:03:44,999 | INFO     | overall cleanup function is called
[2026-03-10 01:04:49] 2026-03-10 00:03:46,005 | INFO     | --- collectZombieJob: --- 10, [4094304]
[2026-03-10 01:04:49] 2026-03-10 00:03:46,005 | INFO     | zombie collector waiting for pid 4094304
[2026-03-10 01:04:49] 2026-03-10 00:03:46,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 01:04:49] 2026-03-10 00:03:46,005 | INFO     | collected zombie processes
[2026-03-10 01:04:49] 2026-03-10 00:03:46,005 | INFO     | will attempt to kill all subprocesses of pid=4094304
[2026-03-10 01:04:49] 2026-03-10 00:03:46,539 | INFO     | process IDs to be killed: [4094304] (in reverse order)
[2026-03-10 01:04:49] 2026-03-10 00:03:46,755 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 01:04:49] 2026-03-10 00:03:46,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 01:04:49] 2026-03-10 00:03:46,812 | INFO     | did not find any defunct processes belonging to 4094304
[2026-03-10 01:04:49] 2026-03-10 00:03:46,871 | INFO     | did not find any defunct processes belonging to 4094304
[2026-03-10 01:04:49] 2026-03-10 00:03:46,871 | INFO     | ready for new job
[2026-03-10 01:04:49] 2026-03-10 00:03:46,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 01:04:49] 2026-03-10 00:03:46,873 | INFO     | **************************************
[2026-03-10 01:04:49] 2026-03-10 00:03:46,873 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 01:04:49] 2026-03-10 00:03:46,873 | INFO     | **************************************
[2026-03-10 01:04:49] 2026-03-10 00:03:46,873 | INFO     | 
[2026-03-10 01:04:49] 2026-03-10 00:03:46,879 | INFO     | architecture information:
[2026-03-10 01:04:49] 2026-03-10 00:03:46,879 | INFO     | executing command: cat /etc/os-release
[2026-03-10 01:04:49] 2026-03-10 00:03:46,894 | INFO     | cat /etc/os-release:
[2026-03-10 01:04:49] NAME="CentOS Linux"
[2026-03-10 01:04:49] VERSION="7 (Core)"
[2026-03-10 01:04:49] ID="centos"
[2026-03-10 01:04:49] ID_LIKE="rhel fedora"
[2026-03-10 01:04:49] VERSION_ID="7"
[2026-03-10 01:04:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 01:04:49] ANSI_COLOR="0;31"
[2026-03-10 01:04:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 01:04:49] HOME_URL="https://www.centos.org/"
[2026-03-10 01:04:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 01:04:49] 
[2026-03-10 01:04:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 01:04:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 01:04:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 01:04:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 01:04:49] 
[2026-03-10 01:04:49] 2026-03-10 00:03:46,895 | INFO     | **************************************
[2026-03-10 01:04:49] 2026-03-10 00:03:46,966 | WARNING  | process 4094304 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 01:04:49] 2026-03-10 00:03:47,259 | INFO     | using path: /var/lib/boinc/var/slot76/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 01:04:49] 2026-03-10 00:03:47,259 | INFO     | using path: /var/lib/boinc/var/slot76/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 01:04:49] 2026-03-10 00:03:47,259 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 01:04:49] 2026-03-10 00:03:47,259 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 01:04:49] 2026-03-10 00:03:47,260 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot76/slots/3/PanDA_Pilot-7046648499/payload.stdout) since it has not been created yet
[2026-03-10 01:04:49] 2026-03-10 00:03:47,260 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/3
[2026-03-10 01:04:49] 2026-03-10 00:03:47,279 | INFO     | sufficient remaining disk space (19150143488 B)
[2026-03-10 01:04:49] 2026-03-10 00:03:47,280 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-10 01:04:49] 2026-03-10 00:03:47,280 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot76/slots/3/PanDA_Pilot-7046648499/HITS.48966988._020223.pool.root.1 since it does not exist
[2026-03-10 01:04:49] 2026-03-10 00:03:47,397 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/3
[2026-03-10 01:04:49] 2026-03-10 00:03:47,469 | INFO     | sufficient remaining disk space (19150143488 B)
[2026-03-10 01:04:49] 2026-03-10 00:03:47,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 01:04:49] 2026-03-10 00:03:47,470 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 01:04:49] 2026-03-10 00:03:47,473 | INFO     | update_server=False
[2026-03-10 01:04:49] 2026-03-10 00:03:47,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 01:04:49] 2026-03-10 00:03:47,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 01:04:49] 2026-03-10 00:03:47,589 | INFO     | all payload control threads have been joined
[2026-03-10 01:04:49] 2026-03-10 00:03:47,711 | INFO     | number of running child processes to parent process 4094304: 1
[2026-03-10 01:04:49] 2026-03-10 00:03:47,711 | INFO     | maximum number of monitored processes: 6
[2026-03-10 01:04:49] 2026-03-10 00:03:47,711 | INFO     | aborting job monitoring since job object (job id=7046648499) has expired
[2026-03-10 01:04:49] 2026-03-10 00:03:47,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:04:49] 2026-03-10 00:03:47,711 | INFO     | will abort loop
[2026-03-10 01:04:49] 2026-03-10 00:03:48,042 | INFO     | all data control threads have been joined
[2026-03-10 01:04:49] 2026-03-10 00:03:48,174 | INFO     | all job control threads have been joined
[2026-03-10 01:04:49] 2026-03-10 00:03:48,478 | INFO     | [job] retrieve thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:48,489 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:48,519 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:48,594 | INFO     | [payload] control thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:48,716 | INFO     | [job] job monitor thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:48,753 | INFO     | [data] copytool_in thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:48,835 | INFO     | [payload] validate_post thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:48,928 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:49,047 | INFO     | [data] control thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:49,179 | INFO     | [job] control thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:49,251 | INFO     | [payload] failed_post thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:49,479 | INFO     | [data] copytool_out thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:49,744 | INFO     | [job] validate thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:49,969 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:49,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:04:49] 2026-03-10 00:03:50,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 01:04:49] 2026-03-10 00:03:50,997 | INFO     | [job] queue monitor thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:03:54,057 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 01:04:49] 2026-03-10 00:04:16,792 | INFO     | PID=4088437 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 01:04:49] 2026-03-10 00:04:16,792 | INFO     | .. there are 62 such processes running
[2026-03-10 01:04:49] 2026-03-10 00:04:16,792 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 01:04:49] 2026-03-10 00:04:16,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 01:04:49] 2026-03-10 00:04:16,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 01:04:49] 2026-03-10 00:04:43,661 | INFO     | [monitor] cgroup control has ended
[2026-03-10 01:04:49] 2026-03-10 00:04:44,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22994474116928)>', '<ExcThread(monitor, started 22994234910464)>']
[2026-03-10 01:04:49] 2026-03-10 00:04:44,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 01:04:49] 2026-03-10 00:04:44,938 | INFO     | [monitor] control thread has ended
[2026-03-10 01:04:49] 2026-03-10 00:04:49,381 | INFO     | all workflow threads have been joined
[2026-03-10 01:04:49] 2026-03-10 00:04:49,382 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 01:04:49] 2026-03-10 00:04:49,382 | INFO     | traces error code: 0
[2026-03-10 01:04:49] 2026-03-10 00:04:49,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 01:04:49] 2026-03-10 00:04:49,522 [wrapper] ==== pilot stdout END ====
[2026-03-10 01:04:49] 2026-03-10 00:04:49,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 01:04:49] 2026-03-10 00:04:49,528 [wrapper] pilotpid: 4088437
[2026-03-10 01:04:49] 2026-03-10 00:04:49,531 [wrapper] Pilot exit status: 0
[2026-03-10 01:04:49] 2026-03-10 00:04:49,541 [wrapper] pandaids: 7046648499
[2026-03-10 01:04:49] 2026-03-10 00:04:49,651 [wrapper] cleanup supervisor_pilot  900266 4088438
[2026-03-10 01:04:49] 2026-03-10 00:04:49,655 [wrapper] Test setup, not cleaning
[2026-03-10 01:04:49] 2026-03-10 00:04:49,657 [wrapper] apfmon messages muted
[2026-03-10 01:04:49] 2026-03-10 00:04:49,659 [wrapper] ==== wrapper stdout END ====
[2026-03-10 01:04:49] 2026-03-10 00:04:49,661 [wrapper] ==== wrapper stderr END ====
[2026-03-10 01:04:49]  *** Error codes and diagnostics ***
[2026-03-10 01:04:49]     "exeErrorCode": 0,
[2026-03-10 01:04:49]     "exeErrorDiag": "",
[2026-03-10 01:04:49]     "pilotErrorCode": 0,
[2026-03-10 01:04:49]     "pilotErrorDiag": "",
[2026-03-10 01:04:49]  *** Listing of results directory ***
[2026-03-10 01:04:49] total 411452
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc    584627 Mar  9 00:13 pilot3.tar.gz
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc      5111 Mar  9 00:14 queuedata.json
[2026-03-10 01:04:49] -rwx------. 1 boinc boinc     36322 Mar  9 00:15 runpilot2-wrapper.sh
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc       100 Mar  9 23:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 01:04:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 23:23 run_atlas
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc       105 Mar  9 23:23 job.xml
[2026-03-10 01:04:49] -rw-r--r--. 2 boinc boinc 211774119 Mar  9 23:23 EVNT.48966985._000790.pool.root.1
[2026-03-10 01:04:49] -rw-r--r--. 2 boinc boinc     15845 Mar  9 23:23 start_atlas.sh
[2026-03-10 01:04:49] drwxrwx--x. 2 boinc boinc      4096 Mar  9 23:23 shared
[2026-03-10 01:04:49] -rw-r--r--. 2 boinc boinc    597972 Mar  9 23:23 input.tar.gz
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc      6707 Mar  9 23:23 init_data.xml
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc         0 Mar  9 23:23 boinc_lockfile
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc      2592 Mar  9 23:23 pandaJob.out
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc   1002738 Mar  9 23:23 agis_schedconf.cvmfs.json
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc   1511578 Mar  9 23:23 agis_ddmendpoints.agis.ALL.json
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc       443 Mar  9 23:23 workernode_map.json
[2026-03-10 01:04:49] drwx------. 5 boinc boinc      4096 Mar  9 23:23 pilot3
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc 203279720 Mar 10 01:03 HITS.48966988._020223.pool.root.1
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc       530 Mar 10 01:03 boinc_task_state.xml
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc      1033 Mar 10 01:03 memory_monitor_summary.json
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc        95 Mar 10 01:03 pilot_heartbeat.json
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc    300188 Mar 10 01:03 log.48966988._020223.job.log.tgz.1
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc      6356 Mar 10 01:03 heartbeat.json
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc      8192 Mar 10 01:04 boinc_mmap_file
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc        27 Mar 10 01:04 wrapper_checkpoint.txt
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc      6369 Mar 10 01:04 pilotlog.txt
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc    871519 Mar 10 01:04 log.48966988._020223.job.log.1
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc       357 Mar 10 01:04 output.list
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc       620 Mar 10 01:04 runtime_log
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc   1187840 Mar 10 01:04 result.tar.gz
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc      9204 Mar 10 01:04 runtime_log.err
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc       662 Mar 10 01:04 LpbMDm9VcJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmP9XLDmyOMXym.diag
[2026-03-10 01:04:49] -rw-r--r--. 1 boinc boinc     21945 Mar 10 01:04 stderr.txt
[2026-03-10 01:04:49] HITS file was successfully produced:
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc 203279720 Mar 10 01:03 shared/HITS.pool.root.1
[2026-03-10 01:04:49]  *** Contents of shared directory: ***
[2026-03-10 01:04:49] total 407096
[2026-03-10 01:04:49] -rw-r--r--. 2 boinc boinc 211774119 Mar  9 23:23 ATLAS.root_0
[2026-03-10 01:04:49] -rw-r--r--. 2 boinc boinc     15845 Mar  9 23:23 start_atlas.sh
[2026-03-10 01:04:49] -rw-r--r--. 2 boinc boinc    597972 Mar  9 23:23 input.tar.gz
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc 203279720 Mar 10 01:03 HITS.pool.root.1
[2026-03-10 01:04:49] -rw-------. 1 boinc boinc   1187840 Mar 10 01:04 result.tar.gz
01:04:51 (4083911): run_atlas exited; CPU time 23207.750401
01:04:51 (4083911): called boinc_finish(0)

</stderr_txt>
]]>

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