Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:57:58 (3775702): wrapper (7.7.26015): starting
11:57:58 (3775702): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 11:57:58] Arguments: --nthreads 4
[2026-03-10 11:57:58] Threads: 4
[2026-03-10 11:57:58] Checking for CVMFS
[2026-03-10 11:57:58] No cvmfs_config command found, will try listing directly
[2026-03-10 11:57:58] CVMFS is ok
[2026-03-10 11:57:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 11:57:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 11:57:58] Further information can be found at the LHC@home message board.
[2026-03-10 11:57:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 11:57:58] Checking for apptainer binary...
[2026-03-10 11:57:58] which: no apptainer in ((null))
[2026-03-10 11:57:58] apptainer is not installed, using version from CVMFS
[2026-03-10 11:57:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 11:57:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-10 11:57:58] apptainer works
[2026-03-10 11:57:58] Set ATHENA_PROC_NUMBER=4
[2026-03-10 11:57:58] Set ATHENA_CORE_NUMBER=4
[2026-03-10 11:57:58] Starting ATLAS job with PandaID=7040270835
[2026-03-10 11:57:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 13:18:25]  *** The last 200 lines of the pilot log: ***
[2026-03-10 13:18:25]  is_tar=False
[2026-03-10 13:18:25]  lfn=log.48955006._030538.job.log.tgz.1
[2026-03-10 13:18:25]  mtime=0
[2026-03-10 13:18:25]  protocol_id=None
[2026-03-10 13:18:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 13:18:25]  replicas=None
[2026-03-10 13:18:25]  scope=mc23_13p6TeV
[2026-03-10 13:18:25]  status=None
[2026-03-10 13:18:25]  status_code=0
[2026-03-10 13:18:25]  storage_token=
[2026-03-10 13:18:25]  surl=/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7040270835/log.48955006._030538.job.log.tgz.1
[2026-03-10 13:18:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/85/log.48955006._030538.job.log.tgz.1
[2026-03-10 13:18:25]  workdir=None
[2026-03-10 13:18:25] ]
[2026-03-10 13:18:25] 2026-03-10 12:17:42,834 | INFO     | transferring file log.48955006._030538.job.log.tgz.1 from /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7040270835/log.48955006._030538.job.log.tgz.1 to /var/lib/
[2026-03-10 13:18:25] 2026-03-10 12:17:42,835 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7040270835/log.48955006._030538.job.log.tgz.1 /var/lib/boinc/var/slot212/slots/0/
[2026-03-10 13:18:25] 2026-03-10 12:17:42,848 | INFO     | adding to output.list: log.48955006._030538.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/85/log.48955006._030538.job.log.tg
[2026-03-10 13:18:25] 2026-03-10 12:17:42,849 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 13:18:25] 2026-03-10 12:17:42,849 | INFO     | summary of transferred files:
[2026-03-10 13:18:25] 2026-03-10 12:17:42,849 | INFO     |  -- lfn=log.48955006._030538.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 13:18:25] 2026-03-10 12:17:42,849 | INFO     | stage-out finished correctly
[2026-03-10 13:18:25] 2026-03-10 12:17:43,941 | INFO     | time since job start (4773s) is within the limit (349056.0s)
[2026-03-10 13:18:25] 2026-03-10 12:17:44,174 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 13:18:25] 2026-03-10 12:17:45,946 | INFO     | time since job start (4775s) is within the limit (349056.0s)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,249 | INFO     | job 7040270835 has state=finished
[2026-03-10 13:18:25] 2026-03-10 12:17:46,250 | INFO     | preparing for final server update for job 7040270835 in state='finished'
[2026-03-10 13:18:25] 2026-03-10 12:17:46,250 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7040270835/jobReport.json
[2026-03-10 13:18:25] 2026-03-10 12:17:46,251 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-10 13:18:25] 2026-03-10 12:17:46,251 | INFO     | this job has now completed (state=finished)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,251 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,252 | INFO     | log transfer has been attempted: DONE
[2026-03-10 13:18:25] 2026-03-10 12:17:46,252 | INFO     | job 7040270835 has finished - writing final server update
[2026-03-10 13:18:25] 2026-03-10 12:17:46,252 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_901031/.job.ad'
[2026-03-10 13:18:25] 2026-03-10 12:17:46,252 | INFO     | total number of processed events: 400 (read)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,269 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7040270835/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,270 | INFO     | extracted standard info from prmon json
[2026-03-10 13:18:25] 2026-03-10 12:17:46,270 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 13:18:25] 2026-03-10 12:17:46,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 13:18:25] 2026-03-10 12:17:46,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 13:18:25] 2026-03-10 12:17:46,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 13:18:25] 2026-03-10 12:17:46,271 | INFO     | fitting pss+swap vs Time
[2026-03-10 13:18:25] 2026-03-10 12:17:46,271 | INFO     | sum of square deviations: 110960220.0
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | sum of deviations: 722783021.9999999
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | mean x: 1773142751.0
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | mean y: 2319190.971830986
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | intersect: -11547743308.950874
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | chi2: 0.0001920996082002208
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | current memory leak: 6.51 B/s (using 71 data points, chi2=0.00)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | could have reported an average CPU frequency of 3630 MHz (6 samples)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | ..............................
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . Timing measurements:
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . get job = 0 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . initial setup = 4 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . payload setup = 4 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . stage-in = 0 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . payload execution = 4752 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . stage-out = 0 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | . log creation = 0 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,272 | INFO     | ..............................
[2026-03-10 13:18:25] 2026-03-10 12:17:46,320 | INFO     | 
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | job summary report
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | --------------------------------------------------
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | PanDA job id: 7040270835
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | task id: 48955006
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | errors: (none)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | pilot state: finished 
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | transexitcode: 0
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | exeerrorcode: 0
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | exeerrordiag: 
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | exitcode: 0
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | exitmsg: OK
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | cpuconsumptiontime: 18279 s
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | nevents: 400
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | neventsw: 0
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | pid: 3794025
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | pgrp: 3794025
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | corecount: 4
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | event service: False
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | sizes: {0: 2279980, 1: 2280242, 11: 2280270, 4761: 2306528, 4762: 2315550, 4763: 2315606, 4765: 2315928}
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | --------------------------------------------------
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | 
[2026-03-10 13:18:25] 2026-03-10 12:17:46,321 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-10 13:18:25] 2026-03-10 12:17:46,338 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | job 7040270835 has completed (purged errors)
[2026-03-10 13:18:25] 2026-03-10 12:17:46,339 | INFO     | overall cleanup function is called
[2026-03-10 13:18:25] 2026-03-10 12:17:46,976 | WARNING  | process 3794025 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 13:18:25] 2026-03-10 12:17:47,304 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 13:18:25] 2026-03-10 12:17:47,346 | INFO     | --- collectZombieJob: --- 10, [3794025]
[2026-03-10 13:18:25] 2026-03-10 12:17:47,346 | INFO     | zombie collector waiting for pid 3794025
[2026-03-10 13:18:25] 2026-03-10 12:17:47,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 13:18:25] 2026-03-10 12:17:47,346 | INFO     | collected zombie processes
[2026-03-10 13:18:25] 2026-03-10 12:17:47,346 | INFO     | will attempt to kill all subprocesses of pid=3794025
[2026-03-10 13:18:25] 2026-03-10 12:17:48,655 | INFO     | number of running child processes to parent process 3794025: 1
[2026-03-10 13:18:25] 2026-03-10 12:17:48,656 | INFO     | maximum number of monitored processes: 6
[2026-03-10 13:18:25] 2026-03-10 12:17:48,656 | INFO     | aborting job monitoring since job object (job id=7040270835) has expired
[2026-03-10 13:18:25] 2026-03-10 12:17:48,672 | INFO     | process IDs to be killed: [3794025] (in reverse order)
[2026-03-10 13:18:25] 2026-03-10 12:17:48,900 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 13:18:25] 2026-03-10 12:17:48,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 13:18:25] 2026-03-10 12:17:48,928 | INFO     | did not find any defunct processes belonging to 3794025
[2026-03-10 13:18:25] 2026-03-10 12:17:48,953 | INFO     | did not find any defunct processes belonging to 3794025
[2026-03-10 13:18:25] 2026-03-10 12:17:48,953 | INFO     | ready for new job
[2026-03-10 13:18:25] 2026-03-10 12:17:48,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 13:18:25] 2026-03-10 12:17:48,954 | INFO     | **************************************
[2026-03-10 13:18:25] 2026-03-10 12:17:48,955 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 13:18:25] 2026-03-10 12:17:48,955 | INFO     | **************************************
[2026-03-10 13:18:25] 2026-03-10 12:17:48,955 | INFO     | 
[2026-03-10 13:18:25] 2026-03-10 12:17:48,960 | INFO     | architecture information:
[2026-03-10 13:18:25] 2026-03-10 12:17:48,961 | INFO     | executing command: cat /etc/os-release
[2026-03-10 13:18:25] 2026-03-10 12:17:48,971 | INFO     | cat /etc/os-release:
[2026-03-10 13:18:25] NAME="CentOS Linux"
[2026-03-10 13:18:25] VERSION="7 (Core)"
[2026-03-10 13:18:25] ID="centos"
[2026-03-10 13:18:25] ID_LIKE="rhel fedora"
[2026-03-10 13:18:25] VERSION_ID="7"
[2026-03-10 13:18:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 13:18:25] ANSI_COLOR="0;31"
[2026-03-10 13:18:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 13:18:25] HOME_URL="https://www.centos.org/"
[2026-03-10 13:18:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 13:18:25] 
[2026-03-10 13:18:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 13:18:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 13:18:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 13:18:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 13:18:25] 
[2026-03-10 13:18:25] 2026-03-10 12:17:48,972 | INFO     | **************************************
[2026-03-10 13:18:25] 2026-03-10 12:17:49,474 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-10 13:18:25] 2026-03-10 12:17:49,495 | INFO     | sufficient remaining disk space (20094910464 B)
[2026-03-10 13:18:25] 2026-03-10 12:17:49,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 13:18:25] 2026-03-10 12:17:49,495 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 13:18:25] 2026-03-10 12:17:49,496 | INFO     | update_server=False
[2026-03-10 13:18:25] 2026-03-10 12:17:49,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 13:18:25] 2026-03-10 12:17:49,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 13:18:25] 2026-03-10 12:17:49,496 | INFO     | will abort loop
[2026-03-10 13:18:25] 2026-03-10 12:17:50,160 | INFO     | all data control threads have been joined
[2026-03-10 13:18:25] 2026-03-10 12:17:50,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 13:18:25] 2026-03-10 12:17:50,235 | INFO     | all job control threads have been joined
[2026-03-10 13:18:25] 2026-03-10 12:17:50,500 | INFO     | [job] retrieve thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:50,501 | INFO     | [job] job monitor thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:50,734 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:50,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 13:18:25] 2026-03-10 12:17:50,943 | INFO     | all payload control threads have been joined
[2026-03-10 13:18:25] 2026-03-10 12:17:51,057 | INFO     | [payload] failed_post thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,139 | INFO     | [job] validate thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,165 | INFO     | [data] control thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,240 | INFO     | [job] control thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,321 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 13:18:25] 2026-03-10 12:17:51,386 | INFO     | [payload] validate_post thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,399 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,416 | INFO     | [data] copytool_in thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:51,948 | INFO     | [payload] control thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:52,352 | INFO     | [job] queue monitor thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:52,917 | INFO     | [data] copytool_out thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:17:54,232 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:18:00,401 | INFO     | job.realtimelogging is not enabled
[2026-03-10 13:18:25] 2026-03-10 12:18:01,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 13:18:25] 2026-03-10 12:18:17,718 | INFO     | [monitor] cgroup control has ended
[2026-03-10 13:18:25] 2026-03-10 12:18:19,588 | INFO     | PID=3782258 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 13:18:25] 2026-03-10 12:18:19,589 | INFO     | .. there are 49 such processes running
[2026-03-10 13:18:25] 2026-03-10 12:18:19,589 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 13:18:25] 2026-03-10 12:18:19,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 13:18:25] 2026-03-10 12:18:19,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 13:18:25] 2026-03-10 12:18:19,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22553887930176)>', '<ExcThread(monitor, started 22553648441088)>']
[2026-03-10 13:18:25] 2026-03-10 12:18:20,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 13:18:25] 2026-03-10 12:18:20,594 | INFO     | [monitor] control thread has ended
[2026-03-10 13:18:25] 2026-03-10 12:18:24,747 | INFO     | all workflow threads have been joined
[2026-03-10 13:18:25] 2026-03-10 12:18:24,747 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 13:18:25] 2026-03-10 12:18:24,747 | INFO     | traces error code: 0
[2026-03-10 13:18:25] 2026-03-10 12:18:24,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 13:18:25] 2026-03-10 12:18:24,892 [wrapper] ==== pilot stdout END ====
[2026-03-10 13:18:25] 2026-03-10 12:18:24,894 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 13:18:25] 2026-03-10 12:18:24,897 [wrapper] pilotpid: 3782258
[2026-03-10 13:18:25] 2026-03-10 12:18:24,899 [wrapper] Pilot exit status: 0
[2026-03-10 13:18:25] 2026-03-10 12:18:24,908 [wrapper] pandaids: 7040270835
[2026-03-10 13:18:25] 2026-03-10 12:18:25,038 [wrapper] cleanup supervisor_pilot  367932 3782259
[2026-03-10 13:18:25] 2026-03-10 12:18:25,041 [wrapper] Test setup, not cleaning
[2026-03-10 13:18:25] 2026-03-10 12:18:25,043 [wrapper] apfmon messages muted
[2026-03-10 13:18:25] 2026-03-10 12:18:25,046 [wrapper] ==== wrapper stdout END ====
[2026-03-10 13:18:25] 2026-03-10 12:18:25,048 [wrapper] ==== wrapper stderr END ====
[2026-03-10 13:18:25]  *** Error codes and diagnostics ***
[2026-03-10 13:18:25]     "exeErrorCode": 0,
[2026-03-10 13:18:25]     "exeErrorDiag": "",
[2026-03-10 13:18:25]     "pilotErrorCode": 0,
[2026-03-10 13:18:25]     "pilotErrorDiag": "",
[2026-03-10 13:18:25]  *** Listing of results directory ***
[2026-03-10 13:18:25] total 618628
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc    584627 Mar  9 00:13 pilot3.tar.gz
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc      5111 Mar  9 00:14 queuedata.json
[2026-03-10 13:18:25] -rwx------. 1 boinc boinc     36322 Mar  9 00:15 runpilot2-wrapper.sh
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc       100 Mar 10 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 13:18:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 11:57 run_atlas
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc       105 Mar 10 11:57 job.xml
[2026-03-10 13:18:25] -rw-r--r--. 2 boinc boinc     15845 Mar 10 11:57 start_atlas.sh
[2026-03-10 13:18:25] drwxrwx--x. 2 boinc boinc      4096 Mar 10 11:57 shared
[2026-03-10 13:18:25] -rw-r--r--. 2 boinc boinc    597957 Mar 10 11:57 input.tar.gz
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc      6708 Mar 10 11:57 init_data.xml
[2026-03-10 13:18:25] -rw-r--r--. 2 boinc boinc 441800539 Mar 10 11:57 EVNT.46701403._000611.pool.root.1
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc         0 Mar 10 11:57 boinc_lockfile
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc      2564 Mar 10 11:57 pandaJob.out
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc   1005414 Mar 10 11:58 agis_schedconf.cvmfs.json
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc   1511578 Mar 10 11:58 agis_ddmendpoints.agis.ALL.json
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc       444 Mar 10 11:58 workernode_map.json
[2026-03-10 13:18:25] drwx------. 5 boinc boinc      4096 Mar 10 11:58 pilot3
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc 185782844 Mar 10 13:17 HITS.48955006._030538.pool.root.1
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc       530 Mar 10 13:17 boinc_task_state.xml
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc      1042 Mar 10 13:17 memory_monitor_summary.json
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc    273832 Mar 10 13:17 log.48955006._030538.job.log.tgz.1
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc        95 Mar 10 13:17 pilot_heartbeat.json
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc      6355 Mar 10 13:17 heartbeat.json
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc      8192 Mar 10 13:18 boinc_mmap_file
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc        27 Mar 10 13:18 wrapper_checkpoint.txt
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc      4904 Mar 10 13:18 pilotlog.txt
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc    701370 Mar 10 13:18 log.48955006._030538.job.log.1
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc       357 Mar 10 13:18 output.list
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc       620 Mar 10 13:18 runtime_log
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc    993280 Mar 10 13:18 result.tar.gz
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc       663 Mar 10 13:18 zvXKDmRWcJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBeaLDmGKBFZm.diag
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc      9221 Mar 10 13:18 runtime_log.err
[2026-03-10 13:18:25] -rw-r--r--. 1 boinc boinc     21454 Mar 10 13:18 stderr.txt
[2026-03-10 13:18:25] HITS file was successfully produced:
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc 185782844 Mar 10 13:17 shared/HITS.pool.root.1
[2026-03-10 13:18:25]  *** Contents of shared directory: ***
[2026-03-10 13:18:25] total 614460
[2026-03-10 13:18:25] -rw-r--r--. 2 boinc boinc     15845 Mar 10 11:57 start_atlas.sh
[2026-03-10 13:18:25] -rw-r--r--. 2 boinc boinc    597957 Mar 10 11:57 input.tar.gz
[2026-03-10 13:18:25] -rw-r--r--. 2 boinc boinc 441800539 Mar 10 11:57 ATLAS.root_0
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc 185782844 Mar 10 13:17 HITS.pool.root.1
[2026-03-10 13:18:25] -rw-------. 1 boinc boinc    993280 Mar 10 13:18 result.tar.gz
13:18:26 (3775702): run_atlas exited; CPU time 18491.653808
13:18:26 (3775702): called boinc_finish(0)

</stderr_txt>
]]>

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