Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:40 (2949673): wrapper (7.7.26015): starting
00:11:40 (2949673): wrapper: running run_atlas (--nthreads 9)
[2026-03-09 00:11:40] Arguments: --nthreads 9
[2026-03-09 00:11:40] Threads: 9
[2026-03-09 00:11:40] Checking for CVMFS
[2026-03-09 00:11:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 00:11:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 00:11:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 00:11:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 00:11:41] 2.13.3.0 2295398 101344 115172 157063 2 188 23371517 37030913 1832 16776704 0 81485929 99.985 4105906 31811 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-09 00:11:41] CVMFS is ok
[2026-03-09 00:11:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 00:11:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 00:11:41] Further information can be found at the LHC@home message board.
[2026-03-09 00:11:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 00:11:41] Checking for apptainer binary...
[2026-03-09 00:11:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 00:11:41] Running /usr/bin/apptainer --version
[2026-03-09 00:11:41] apptainer version 1.4.5-2.el9
[2026-03-09 00:11:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 00:11:41] c-205-36.aglt2.org
[2026-03-09 00:11:41] apptainer works
[2026-03-09 00:11:41] Set ATHENA_PROC_NUMBER=9
[2026-03-09 00:11:41] Set ATHENA_CORE_NUMBER=9
[2026-03-09 00:11:41] Starting ATLAS job with PandaID=7040192119
[2026-03-09 00:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 01:31:08]  *** The last 200 lines of the pilot log: ***
[2026-03-09 01:31:08]  is_altstaged=None
[2026-03-09 01:31:08]  is_tar=False
[2026-03-09 01:31:08]  lfn=log.48955010._015812.job.log.tgz.1
[2026-03-09 01:31:08]  mtime=0
[2026-03-09 01:31:08]  protocol_id=None
[2026-03-09 01:31:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 01:31:08]  replicas=None
[2026-03-09 01:31:08]  scope=mc23_13p6TeV
[2026-03-09 01:31:08]  status=None
[2026-03-09 01:31:08]  status_code=0
[2026-03-09 01:31:08]  storage_token=
[2026-03-09 01:31:08]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-7040192119/log.48955010._015812.job.log.tgz.1
[2026-03-09 01:31:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/85/log.48955010._015812.job.log.tgz.1
[2026-03-09 01:31:08]  workdir=None
[2026-03-09 01:31:08] ]
[2026-03-09 01:31:08] 2026-03-09 05:30:03,051 | INFO     | transferring file log.48955010._015812.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-7040192119/log.48955010._015812.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-09 01:31:08] 2026-03-09 05:30:03,051 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-7040192119/log.48955010._015812.job.log.tgz.1 /tmp/boinchome/slots/2/log.48955010._015812.job
[2026-03-09 01:31:08] 2026-03-09 05:30:03,068 | INFO     | adding to output.list: log.48955010._015812.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/85/log.48955010._015812.job.log.tg
[2026-03-09 01:31:08] 2026-03-09 05:30:03,069 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 01:31:08] 2026-03-09 05:30:03,069 | INFO     | summary of transferred files:
[2026-03-09 01:31:08] 2026-03-09 05:30:03,069 | INFO     |  -- lfn=log.48955010._015812.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 01:31:08] 2026-03-09 05:30:03,069 | INFO     | stage-out finished correctly
[2026-03-09 01:31:08] 2026-03-09 05:30:03,917 | INFO     | time since job start (4688s) is within the limit (349056.0s)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,258 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 01:31:08] 2026-03-09 05:30:05,359 | INFO     | job 7040192119 has state=finished
[2026-03-09 01:31:08] 2026-03-09 05:30:05,360 | INFO     | preparing for final server update for job 7040192119 in state='finished'
[2026-03-09 01:31:08] 2026-03-09 05:30:05,426 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,426 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7040192119/jobReport.json
[2026-03-09 01:31:08] 2026-03-09 05:30:05,429 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-09 01:31:08] 2026-03-09 05:30:05,430 | INFO     | this job has now completed (state=finished)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,430 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,430 | INFO     | log transfer has been attempted: DONE
[2026-03-09 01:31:08] 2026-03-09 05:30:05,430 | INFO     | job 7040192119 has finished - writing final server update
[2026-03-09 01:31:08] 2026-03-09 05:30:05,431 | INFO     | total number of processed events: 400 (read)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,439 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7040192119/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,440 | INFO     | extracted standard info from prmon json
[2026-03-09 01:31:08] 2026-03-09 05:30:05,440 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 01:31:08] 2026-03-09 05:30:05,440 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 01:31:08] 2026-03-09 05:30:05,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 01:31:08] 2026-03-09 05:30:05,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 01:31:08] 2026-03-09 05:30:05,443 | INFO     | fitting pss+swap vs Time
[2026-03-09 01:31:08] 2026-03-09 05:30:05,443 | INFO     | sum of square deviations: 106336877.5
[2026-03-09 01:31:08] 2026-03-09 05:30:05,444 | INFO     | sum of deviations: 1193795193.0
[2026-03-09 01:31:08] 2026-03-09 05:30:05,444 | INFO     | mean x: 1773031945.5
[2026-03-09 01:31:08] 2026-03-09 05:30:05,444 | INFO     | mean y: 2563002.0
[2026-03-09 01:31:08] 2026-03-09 05:30:05,444 | INFO     | intersect: -19902450793.175037
[2026-03-09 01:31:08] 2026-03-09 05:30:05,445 | INFO     | chi2: 0.021550658165249256
[2026-03-09 01:31:08] 2026-03-09 05:30:05,445 | INFO     | current memory leak: 11.23 B/s (using 70 data points, chi2=0.02)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,446 | INFO     | could have reported an average CPU frequency of 2693 MHz (6 samples)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,446 | INFO     | ..............................
[2026-03-09 01:31:08] 2026-03-09 05:30:05,446 | INFO     | . Timing measurements:
[2026-03-09 01:31:08] 2026-03-09 05:30:05,446 | INFO     | . get job = 0 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,446 | INFO     | . initial setup = 6 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,447 | INFO     | . payload setup = 5 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,447 | INFO     | . stage-in = 0 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,447 | INFO     | . payload execution = 4666 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,447 | INFO     | . stage-out = 0 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,447 | INFO     | . log creation = 0 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,448 | INFO     | ..............................
[2026-03-09 01:31:08] 2026-03-09 05:30:05,549 | INFO     | 
[2026-03-09 01:31:08] 2026-03-09 05:30:05,550 | INFO     | job summary report
[2026-03-09 01:31:08] 2026-03-09 05:30:05,550 | INFO     | --------------------------------------------------
[2026-03-09 01:31:08] 2026-03-09 05:30:05,550 | INFO     | PanDA job id: 7040192119
[2026-03-09 01:31:08] 2026-03-09 05:30:05,550 | INFO     | task id: 48955010
[2026-03-09 01:31:08] 2026-03-09 05:30:05,551 | INFO     | errors: (none)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,551 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 01:31:08] 2026-03-09 05:30:05,551 | INFO     | pilot state: finished 
[2026-03-09 01:31:08] 2026-03-09 05:30:05,551 | INFO     | transexitcode: 0
[2026-03-09 01:31:08] 2026-03-09 05:30:05,551 | INFO     | exeerrorcode: 0
[2026-03-09 01:31:08] 2026-03-09 05:30:05,551 | INFO     | exeerrordiag: 
[2026-03-09 01:31:08] 2026-03-09 05:30:05,552 | INFO     | exitcode: 0
[2026-03-09 01:31:08] 2026-03-09 05:30:05,552 | INFO     | exitmsg: OK
[2026-03-09 01:31:08] 2026-03-09 05:30:05,552 | INFO     | cpuconsumptiontime: 37994 s
[2026-03-09 01:31:08] 2026-03-09 05:30:05,552 | INFO     | nevents: 400
[2026-03-09 01:31:08] 2026-03-09 05:30:05,552 | INFO     | neventsw: 0
[2026-03-09 01:31:08] 2026-03-09 05:30:05,552 | INFO     | pid: 2957876
[2026-03-09 01:31:08] 2026-03-09 05:30:05,553 | INFO     | pgrp: 2957876
[2026-03-09 01:31:08] 2026-03-09 05:30:05,553 | INFO     | corecount: 9
[2026-03-09 01:31:08] 2026-03-09 05:30:05,553 | INFO     | event service: False
[2026-03-09 01:31:08] 2026-03-09 05:30:05,553 | INFO     | sizes: {0: 2279089, 1: 2280207, 12: 2280207, 4675: 2306524, 4676: 2315522, 4678: 2315900}
[2026-03-09 01:31:08] 2026-03-09 05:30:05,554 | INFO     | --------------------------------------------------
[2026-03-09 01:31:08] 2026-03-09 05:30:05,554 | INFO     | 
[2026-03-09 01:31:08] 2026-03-09 05:30:05,554 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-09 01:31:08] 2026-03-09 05:30:05,571 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,571 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,571 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,571 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,574 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,575 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 01:31:08] 2026-03-09 05:30:05,575 | INFO     | job 7040192119 has completed (purged errors)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,575 | INFO     | overall cleanup function is called
[2026-03-09 01:31:08] 2026-03-09 05:30:05,618 | WARNING  | process 2957876 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 01:31:08] 2026-03-09 05:30:05,778 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 01:31:08] 2026-03-09 05:30:05,970 | INFO     | number of running child processes to parent process 2957876: 1
[2026-03-09 01:31:08] 2026-03-09 05:30:05,971 | INFO     | maximum number of monitored processes: 6
[2026-03-09 01:31:08] 2026-03-09 05:30:05,971 | INFO     | aborting job monitoring since job object (job id=7040192119) has expired
[2026-03-09 01:31:08] 2026-03-09 05:30:06,585 | INFO     | --- collectZombieJob: --- 10, [2957876]
[2026-03-09 01:31:08] 2026-03-09 05:30:06,586 | INFO     | zombie collector waiting for pid 2957876
[2026-03-09 01:31:08] 2026-03-09 05:30:06,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 01:31:08] 2026-03-09 05:30:06,586 | INFO     | collected zombie processes
[2026-03-09 01:31:08] 2026-03-09 05:30:06,586 | INFO     | will attempt to kill all subprocesses of pid=2957876
[2026-03-09 01:31:08] 2026-03-09 05:30:06,779 | INFO     | process IDs to be killed: [2957876] (in reverse order)
[2026-03-09 01:31:08] 2026-03-09 05:30:06,833 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 01:31:08] 2026-03-09 05:30:06,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 01:31:08] 2026-03-09 05:30:06,839 | INFO     | did not find any defunct processes belonging to 2957876
[2026-03-09 01:31:08] 2026-03-09 05:30:06,844 | INFO     | did not find any defunct processes belonging to 2957876
[2026-03-09 01:31:08] 2026-03-09 05:30:06,844 | INFO     | ready for new job
[2026-03-09 01:31:08] 2026-03-09 05:30:06,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 01:31:08] 2026-03-09 05:30:06,846 | INFO     | **************************************
[2026-03-09 01:31:08] 2026-03-09 05:30:06,846 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 01:31:08] 2026-03-09 05:30:06,846 | INFO     | **************************************
[2026-03-09 01:31:08] 2026-03-09 05:30:06,846 | INFO     | 
[2026-03-09 01:31:08] 2026-03-09 05:30:06,848 | INFO     | architecture information:
[2026-03-09 01:31:08] 2026-03-09 05:30:06,849 | INFO     | executing command: cat /etc/os-release
[2026-03-09 01:31:08] 2026-03-09 05:30:06,862 | INFO     | cat /etc/os-release:
[2026-03-09 01:31:08] NAME="CentOS Linux"
[2026-03-09 01:31:08] VERSION="7 (Core)"
[2026-03-09 01:31:08] ID="centos"
[2026-03-09 01:31:08] ID_LIKE="rhel fedora"
[2026-03-09 01:31:08] VERSION_ID="7"
[2026-03-09 01:31:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 01:31:08] ANSI_COLOR="0;31"
[2026-03-09 01:31:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 01:31:08] HOME_URL="https://www.centos.org/"
[2026-03-09 01:31:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 01:31:08] 
[2026-03-09 01:31:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 01:31:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 01:31:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 01:31:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 01:31:08] 
[2026-03-09 01:31:08] 2026-03-09 05:30:06,862 | INFO     | **************************************
[2026-03-09 01:31:08] 2026-03-09 05:30:07,365 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-09 01:31:08] 2026-03-09 05:30:07,376 | INFO     | sufficient remaining disk space (40658534400 B)
[2026-03-09 01:31:08] 2026-03-09 05:30:07,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 01:31:08] 2026-03-09 05:30:07,377 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 01:31:08] 2026-03-09 05:30:07,377 | INFO     | update_server=False
[2026-03-09 01:31:08] 2026-03-09 05:30:07,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 01:31:08] 2026-03-09 05:30:07,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 01:31:08] 2026-03-09 05:30:07,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 01:31:08] 2026-03-09 05:30:07,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 01:31:08] 2026-03-09 05:30:07,378 | INFO     | aborting loop
[2026-03-09 01:31:08] 2026-03-09 05:30:07,387 | INFO     | all job control threads have been joined
[2026-03-09 01:31:08] 2026-03-09 05:30:07,673 | INFO     | all data control threads have been joined
[2026-03-09 01:31:08] 2026-03-09 05:30:08,383 | INFO     | [job] retrieve thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:08,383 | INFO     | [job] job monitor thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:08,383 | INFO     | [job] queue monitor thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:08,392 | INFO     | [job] control thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:08,482 | INFO     | [data] copytool_in thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:08,679 | INFO     | [data] control thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:08,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 01:31:08] 2026-03-09 05:30:08,688 | INFO     | all payload control threads have been joined
[2026-03-09 01:31:08] 2026-03-09 05:30:09,162 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:09,162 | INFO     | [job] validate thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:09,366 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:09,564 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:09,658 | INFO     | [payload] validate_post thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:09,689 | INFO     | [payload] control thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:09,878 | INFO     | [payload] failed_post thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:10,688 | INFO     | [data] copytool_out thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:11,384 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:17,596 | INFO     | job.realtimelogging is not enabled
[2026-03-09 01:31:08] 2026-03-09 05:30:18,601 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 01:31:08] 2026-03-09 05:30:37,240 | INFO     | PID=2953369 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 01:31:08] 2026-03-09 05:30:37,241 | INFO     | .. there are 3 such processes running
[2026-03-09 01:31:08] 2026-03-09 05:30:37,241 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 01:31:08] 2026-03-09 05:30:37,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 01:31:08] 2026-03-09 05:30:37,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 01:31:08] 2026-03-09 05:31:02,770 | INFO     | [monitor] cgroup control has ended
[2026-03-09 01:31:08] 2026-03-09 05:31:03,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768684681024)>', '<ExcThread(monitor, started 139768318891776)>']
[2026-03-09 01:31:08] 2026-03-09 05:31:04,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 01:31:08] 2026-03-09 05:31:04,376 | INFO     | [monitor] control thread has ended
[2026-03-09 01:31:08] 2026-03-09 05:31:08,411 | INFO     | all workflow threads have been joined
[2026-03-09 01:31:08] 2026-03-09 05:31:08,411 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 01:31:08] 2026-03-09 05:31:08,411 | INFO     | traces error code: 0
[2026-03-09 01:31:08] 2026-03-09 05:31:08,411 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 01:31:08] 2026-03-09 05:31:08,517 [wrapper] ==== pilot stdout END ====
[2026-03-09 01:31:08] 2026-03-09 05:31:08,519 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 01:31:08] 2026-03-09 05:31:08,522 [wrapper] pilotpid: 2953369
[2026-03-09 01:31:08] 2026-03-09 05:31:08,524 [wrapper] Pilot exit status: 0
[2026-03-09 01:31:08] 2026-03-09 05:31:08,533 [wrapper] pandaids: 7040192119
[2026-03-09 01:31:08] 2026-03-09 05:31:08,572 [wrapper] cleanup supervisor_pilot 3042272 2953370
[2026-03-09 01:31:08] 2026-03-09 05:31:08,575 [wrapper] Test setup, not cleaning
[2026-03-09 01:31:08] 2026-03-09 05:31:08,577 [wrapper] apfmon messages muted
[2026-03-09 01:31:08] 2026-03-09 05:31:08,580 [wrapper] ==== wrapper stdout END ====
[2026-03-09 01:31:08] 2026-03-09 05:31:08,582 [wrapper] ==== wrapper stderr END ====
[2026-03-09 01:31:08]  *** Error codes and diagnostics ***
[2026-03-09 01:31:08]     "exeErrorCode": 0,
[2026-03-09 01:31:08]     "exeErrorDiag": "",
[2026-03-09 01:31:08]     "pilotErrorCode": 0,
[2026-03-09 01:31:08]     "pilotErrorDiag": "",
[2026-03-09 01:31:08]  *** Listing of results directory ***
[2026-03-09 01:31:08] total 614560
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas    584627 Mar  8 17:54 pilot3.tar.gz
[2026-03-09 01:31:08] -rwx------. 1 boincer umatlas     36322 Mar  8 18:41 runpilot2-wrapper.sh
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas      5111 Mar  8 18:42 queuedata.json
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas       100 Mar  9 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 01:31:08] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 00:11 run_atlas
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas       105 Mar  9 00:11 job.xml
[2026-03-09 01:31:08] -rw-r--r--. 2 boincer umatlas 437769622 Mar  9 00:11 EVNT.46701403._001316.pool.root.1
[2026-03-09 01:31:08] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 00:11 start_atlas.sh
[2026-03-09 01:31:08] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 00:11 shared
[2026-03-09 01:31:08] -rw-r--r--. 2 boincer umatlas    597967 Mar  9 00:11 input.tar.gz
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas         0 Mar  9 00:11 boinc_lockfile
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas      2563 Mar  9 00:11 pandaJob.out
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas    999108 Mar  9 00:11 agis_schedconf.cvmfs.json
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas   1511578 Mar  9 00:11 agis_ddmendpoints.agis.ALL.json
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas       434 Mar  9 00:11 workernode_map.json
[2026-03-09 01:31:08] drwx------. 5 boincer umatlas      4096 Mar  9 00:11 pilot3
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas 185476398 Mar  9 01:29 HITS.48955010._015812.pool.root.1
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas       530 Mar  9 01:29 boinc_task_state.xml
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas        95 Mar  9 01:29 pilot_heartbeat.json
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas      6531 Mar  9 01:29 init_data.xml
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas      1032 Mar  9 01:29 memory_monitor_summary.json
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas    371689 Mar  9 01:30 log.48955010._015812.job.log.tgz.1
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas      6374 Mar  9 01:30 heartbeat.json
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 01:31 boinc_mmap_file
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas        27 Mar  9 01:31 wrapper_checkpoint.txt
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas      4891 Mar  9 01:31 pilotlog.txt
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas    698202 Mar  9 01:31 log.48955010._015812.job.log.1
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas       357 Mar  9 01:31 output.list
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas       620 Mar  9 01:31 runtime_log
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas   1085440 Mar  9 01:31 result.tar.gz
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas      8816 Mar  9 01:31 runtime_log.err
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas       650 Mar  9 01:31 KbNODmbzbJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDms2XLDmR8oZSo.diag
[2026-03-09 01:31:08] -rw-r--r--. 1 boincer umatlas     21453 Mar  9 01:31 stderr.txt
[2026-03-09 01:31:08] HITS file was successfully produced:
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas 185476398 Mar  9 01:29 shared/HITS.pool.root.1
[2026-03-09 01:31:08]  *** Contents of shared directory: ***
[2026-03-09 01:31:08] total 610308
[2026-03-09 01:31:08] -rw-r--r--. 2 boincer umatlas 437769622 Mar  9 00:11 ATLAS.root_0
[2026-03-09 01:31:08] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 00:11 start_atlas.sh
[2026-03-09 01:31:08] -rw-r--r--. 2 boincer umatlas    597967 Mar  9 00:11 input.tar.gz
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas 185476398 Mar  9 01:29 HITS.pool.root.1
[2026-03-09 01:31:08] -rw-------. 1 boincer umatlas   1085440 Mar  9 01:31 result.tar.gz
01:31:10 (2949673): run_atlas exited; CPU time 38090.537683
01:31:10 (2949673): called boinc_finish(0)

</stderr_txt>
]]>

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