Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:40:11 (598751): wrapper (7.7.26015): starting
12:40:11 (598751): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 12:40:11] Arguments: --nthreads 4
[2026-03-09 12:40:11] Threads: 4
[2026-03-09 12:40:11] Checking for CVMFS
[2026-03-09 12:40:11] No cvmfs_config command found, will try listing directly
[2026-03-09 12:40:11] CVMFS is ok
[2026-03-09 12:40:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 12:40:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 12:40:11] Further information can be found at the LHC@home message board.
[2026-03-09 12:40:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 12:40:11] Checking for apptainer binary...
[2026-03-09 12:40:11] which: no apptainer in ((null))
[2026-03-09 12:40:11] apptainer is not installed, using version from CVMFS
[2026-03-09 12:40:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 12:40:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-09 12:40:11] apptainer works
[2026-03-09 12:40:11] Set ATHENA_PROC_NUMBER=4
[2026-03-09 12:40:11] Set ATHENA_CORE_NUMBER=4
[2026-03-09 12:40:11] Starting ATLAS job with PandaID=7046723421
[2026-03-09 12:40:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 15:48:53]  *** The last 200 lines of the pilot log: ***
[2026-03-09 15:48:53] 2026-03-09 14:48:08,183 | INFO     | fitting pss+swap vs Time
[2026-03-09 15:48:53] 2026-03-09 14:48:08,183 | INFO     | sum of square deviations: 1963274020.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,184 | INFO     | sum of deviations: -17197890796.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,184 | INFO     | mean x: 1773062063.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,185 | INFO     | mean y: 2349635.789189189
[2026-03-09 15:48:53] 2026-03-09 14:48:08,185 | INFO     | intersect: 15534021436.755856
[2026-03-09 15:48:53] 2026-03-09 14:48:08,185 | INFO     | chi2: 2.1339883549036616
[2026-03-09 15:48:53] 2026-03-09 14:48:08,185 | INFO     | sum of square deviations: 1808350185.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,186 | INFO     | sum of deviations: -5031427345.500002
[2026-03-09 15:48:53] 2026-03-09 14:48:08,186 | INFO     | mean x: 1773061910.5
[2026-03-09 15:48:53] 2026-03-09 14:48:08,187 | INFO     | mean y: 2361360.4944444443
[2026-03-09 15:48:53] 2026-03-09 14:48:08,187 | INFO     | intersect: 4935605073.881837
[2026-03-09 15:48:53] 2026-03-09 14:48:08,187 | INFO     | chi2: 1.3344764348073925
[2026-03-09 15:48:53] 2026-03-09 14:48:08,187 | INFO     | current chi2=1.3344764348073925 (change=37.46561776024138 %)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,187 | INFO     | sum of square deviations: 1661798600.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,188 | INFO     | sum of deviations: -4732773694.000003
[2026-03-09 15:48:53] 2026-03-09 14:48:08,188 | INFO     | mean x: 1773061758.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,189 | INFO     | mean y: 2361671.577142857
[2026-03-09 15:48:53] 2026-03-09 14:48:08,189 | INFO     | intersect: 5052010916.738258
[2026-03-09 15:48:53] 2026-03-09 14:48:08,189 | INFO     | chi2: 1.3342032417440466
[2026-03-09 15:48:53] 2026-03-09 14:48:08,189 | INFO     | current chi2=1.3342032417440466 (change=0.020471928632098697 %)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,189 | INFO     | right removable region: 174
[2026-03-09 15:48:53] 2026-03-09 14:48:08,189 | INFO     | sum of square deviations: 1808350185.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,190 | INFO     | sum of deviations: -38234103746.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,190 | INFO     | mean x: 1773062215.5
[2026-03-09 15:48:53] 2026-03-09 14:48:08,191 | INFO     | mean y: 2370000.3666666667
[2026-03-09 15:48:53] 2026-03-09 14:48:08,191 | INFO     | intersect: 37490377167.26372
[2026-03-09 15:48:53] 2026-03-09 14:48:08,191 | INFO     | chi2: 0.8850337269608209
[2026-03-09 15:48:53] 2026-03-09 14:48:08,191 | INFO     | current chi2=0.8850337269608209 (change=58.526778043229974 %)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,191 | INFO     | sum of square deviations: 1661798600.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,192 | INFO     | sum of deviations: -32896405740.000008
[2026-03-09 15:48:53] 2026-03-09 14:48:08,192 | INFO     | mean x: 1773062368.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,192 | INFO     | mean y: 2364424.1885714284
[2026-03-09 15:48:53] 2026-03-09 14:48:08,193 | INFO     | intersect: 35101310265.19073
[2026-03-09 15:48:53] 2026-03-09 14:48:08,193 | INFO     | chi2: 0.8723428123640233
[2026-03-09 15:48:53] 2026-03-09 14:48:08,193 | INFO     | current chi2=0.8723428123640233 (change=1.4339470022659844 %)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,193 | INFO     | left removable region: 20
[2026-03-09 15:48:53] 2026-03-09 14:48:08,193 | INFO     | sum of square deviations: 1132458442.5
[2026-03-09 15:48:53] 2026-03-09 14:48:08,194 | INFO     | sum of deviations: -12326573231.0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,194 | INFO     | mean x: 1773062337.5
[2026-03-09 15:48:53] 2026-03-09 14:48:08,194 | INFO     | mean y: 2368210.1948051946
[2026-03-09 15:48:53] 2026-03-09 14:48:08,195 | INFO     | intersect: 19301780820.93331
[2026-03-09 15:48:53] 2026-03-09 14:48:08,195 | INFO     | chi2: 0.02518095943647047
[2026-03-09 15:48:53] 2026-03-09 14:48:08,195 | INFO     | current memory leak: -10.88 B/s (using 154 data points, chi2=0.03)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | could have reported an average CPU frequency of 2583 MHz (10 samples)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | ..............................
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . Timing measurements:
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . get job = 0 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . initial setup = 6 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . payload setup = 6 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . stage-in = 0 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . payload execution = 11233 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . stage-out = 1 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | . log creation = 0 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,196 | INFO     | ..............................
[2026-03-09 15:48:53] 2026-03-09 14:48:08,285 | INFO     | 
[2026-03-09 15:48:53] 2026-03-09 14:48:08,285 | INFO     | job summary report
[2026-03-09 15:48:53] 2026-03-09 14:48:08,285 | INFO     | --------------------------------------------------
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | PanDA job id: 7046723421
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | task id: 48958651
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | errors: (none)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | pilot state: finished 
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | transexitcode: 0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | exeerrorcode: 0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | exeerrordiag: 
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | exitcode: 0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | exitmsg: OK
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | cpuconsumptiontime: 41189 s
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | nevents: 400
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | neventsw: 0
[2026-03-09 15:48:53] 2026-03-09 14:48:08,286 | INFO     | pid: 607668
[2026-03-09 15:48:53] 2026-03-09 14:48:08,287 | INFO     | pgrp: 607668
[2026-03-09 15:48:53] 2026-03-09 14:48:08,287 | INFO     | corecount: 4
[2026-03-09 15:48:53] 2026-03-09 14:48:08,287 | INFO     | event service: False
[2026-03-09 15:48:53] 2026-03-09 14:48:08,287 | INFO     | sizes: {0: 2280085, 1: 2280319, 11: 2280319, 11244: 2309782, 11246: 2318802, 11249: 2319180}
[2026-03-09 15:48:53] 2026-03-09 14:48:08,287 | INFO     | --------------------------------------------------
[2026-03-09 15:48:53] 2026-03-09 14:48:08,287 | INFO     | 
[2026-03-09 15:48:53] 2026-03-09 14:48:08,287 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/4
[2026-03-09 15:48:53] 2026-03-09 14:48:08,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 15:48:53] 2026-03-09 14:48:08,313 | INFO     | job 7046723421 has completed (purged errors)
[2026-03-09 15:48:53] 2026-03-09 14:48:08,314 | INFO     | overall cleanup function is called
[2026-03-09 15:48:53] 2026-03-09 14:48:09,189 | WARNING  | process 607668 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 15:48:53] 2026-03-09 14:48:09,322 | INFO     | --- collectZombieJob: --- 10, [607668]
[2026-03-09 15:48:53] 2026-03-09 14:48:09,323 | INFO     | zombie collector waiting for pid 607668
[2026-03-09 15:48:53] 2026-03-09 14:48:09,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 15:48:53] 2026-03-09 14:48:09,323 | INFO     | collected zombie processes
[2026-03-09 15:48:53] 2026-03-09 14:48:09,323 | INFO     | will attempt to kill all subprocesses of pid=607668
[2026-03-09 15:48:53] 2026-03-09 14:48:09,665 | INFO     | using path: /var/lib/boinc/var/slot16/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 15:48:53] 2026-03-09 14:48:09,667 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7046723421/payload.stdout) since it has not been created yet
[2026-03-09 15:48:53] 2026-03-09 14:48:09,667 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/4
[2026-03-09 15:48:53] 2026-03-09 14:48:09,686 | INFO     | sufficient remaining disk space (20606615552 B)
[2026-03-09 15:48:53] 2026-03-09 14:48:09,687 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 15:48:53] 2026-03-09 14:48:09,687 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7046723421/HITS.48958651._002055.pool.root.1 since it does not exist
[2026-03-09 15:48:53] 2026-03-09 14:48:10,363 | INFO     | process IDs to be killed: [607668] (in reverse order)
[2026-03-09 15:48:53] 2026-03-09 14:48:10,480 | INFO     | number of running child processes to parent process 607668: 1
[2026-03-09 15:48:53] 2026-03-09 14:48:10,481 | INFO     | maximum number of monitored processes: 6
[2026-03-09 15:48:53] 2026-03-09 14:48:10,481 | INFO     | aborting job monitoring since job object (job id=7046723421) has expired
[2026-03-09 15:48:53] 2026-03-09 14:48:10,518 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 15:48:53] 2026-03-09 14:48:10,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 15:48:53] 2026-03-09 14:48:10,534 | INFO     | did not find any defunct processes belonging to 607668
[2026-03-09 15:48:53] 2026-03-09 14:48:10,548 | INFO     | did not find any defunct processes belonging to 607668
[2026-03-09 15:48:53] 2026-03-09 14:48:10,549 | INFO     | ready for new job
[2026-03-09 15:48:53] 2026-03-09 14:48:10,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 15:48:53] 2026-03-09 14:48:10,552 | INFO     | **************************************
[2026-03-09 15:48:53] 2026-03-09 14:48:10,552 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 15:48:53] 2026-03-09 14:48:10,552 | INFO     | **************************************
[2026-03-09 15:48:53] 2026-03-09 14:48:10,552 | INFO     | 
[2026-03-09 15:48:53] 2026-03-09 14:48:10,556 | INFO     | architecture information:
[2026-03-09 15:48:53] 2026-03-09 14:48:10,556 | INFO     | executing command: cat /etc/os-release
[2026-03-09 15:48:53] 2026-03-09 14:48:10,574 | INFO     | cat /etc/os-release:
[2026-03-09 15:48:53] NAME="CentOS Linux"
[2026-03-09 15:48:53] VERSION="7 (Core)"
[2026-03-09 15:48:53] ID="centos"
[2026-03-09 15:48:53] ID_LIKE="rhel fedora"
[2026-03-09 15:48:53] VERSION_ID="7"
[2026-03-09 15:48:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 15:48:53] ANSI_COLOR="0;31"
[2026-03-09 15:48:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 15:48:53] HOME_URL="https://www.centos.org/"
[2026-03-09 15:48:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 15:48:53] 
[2026-03-09 15:48:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 15:48:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 15:48:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 15:48:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 15:48:53] 
[2026-03-09 15:48:53] 2026-03-09 14:48:10,574 | INFO     | **************************************
[2026-03-09 15:48:53] 2026-03-09 14:48:11,077 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/4
[2026-03-09 15:48:53] 2026-03-09 14:48:11,097 | INFO     | sufficient remaining disk space (20607664128 B)
[2026-03-09 15:48:53] 2026-03-09 14:48:11,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 15:48:53] 2026-03-09 14:48:11,098 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 15:48:53] 2026-03-09 14:48:11,098 | INFO     | update_server=False
[2026-03-09 15:48:53] 2026-03-09 14:48:11,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 15:48:53] 2026-03-09 14:48:11,099 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:48:53] 2026-03-09 14:48:11,099 | INFO     | will abort loop
[2026-03-09 15:48:53] 2026-03-09 14:48:11,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 15:48:53] 2026-03-09 14:48:11,303 | INFO     | all data control threads have been joined
[2026-03-09 15:48:53] 2026-03-09 14:48:12,104 | INFO     | [job] retrieve thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:12,104 | INFO     | [job] job monitor thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:12,130 | INFO     | all job control threads have been joined
[2026-03-09 15:48:53] 2026-03-09 14:48:12,137 | INFO     | [payload] validate_post thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:12,308 | INFO     | [data] control thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:12,315 | INFO     | all payload control threads have been joined
[2026-03-09 15:48:53] 2026-03-09 14:48:12,638 | INFO     | [job] validate thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:12,689 | INFO     | [data] copytool_in thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:12,789 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:12,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:13,007 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:13,104 | INFO     | [data] copytool_out thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:13,135 | INFO     | [job] control thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:13,138 | INFO     | [payload] failed_post thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:13,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:48:53] 2026-03-09 14:48:13,319 | INFO     | [payload] control thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:13,550 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:14,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 15:48:53] 2026-03-09 14:48:14,299 | INFO     | [job] queue monitor thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:18,172 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 15:48:53] 2026-03-09 14:48:40,207 | INFO     | PID=602851 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 15:48:53] 2026-03-09 14:48:40,208 | INFO     | .. there are 14 such processes running
[2026-03-09 15:48:53] 2026-03-09 14:48:40,209 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 15:48:53] 2026-03-09 14:48:40,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 15:48:53] 2026-03-09 14:48:40,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 15:48:53] 2026-03-09 14:48:46,417 | INFO     | [monitor] cgroup control has ended
[2026-03-09 15:48:53] 2026-03-09 14:48:48,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22735750965056)>', '<ExcThread(monitor, started 22735509264128)>']
[2026-03-09 15:48:53] 2026-03-09 14:48:48,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 15:48:53] 2026-03-09 14:48:48,249 | INFO     | [monitor] control thread has ended
[2026-03-09 15:48:53] 2026-03-09 14:48:53,094 | INFO     | all workflow threads have been joined
[2026-03-09 15:48:53] 2026-03-09 14:48:53,095 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 15:48:53] 2026-03-09 14:48:53,095 | INFO     | traces error code: 0
[2026-03-09 15:48:53] 2026-03-09 14:48:53,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 15:48:53] 2026-03-09 14:48:53,263 [wrapper] ==== pilot stdout END ====
[2026-03-09 15:48:53] 2026-03-09 14:48:53,266 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 15:48:53] 2026-03-09 14:48:53,269 [wrapper] pilotpid: 602851
[2026-03-09 15:48:53] 2026-03-09 14:48:53,271 [wrapper] Pilot exit status: 0
[2026-03-09 15:48:53] 2026-03-09 14:48:53,282 [wrapper] pandaids: 7046723421
[2026-03-09 15:48:53] 2026-03-09 14:48:53,366 [wrapper] cleanup supervisor_pilot  842397 602852
[2026-03-09 15:48:53] 2026-03-09 14:48:53,369 [wrapper] Test setup, not cleaning
[2026-03-09 15:48:53] 2026-03-09 14:48:53,373 [wrapper] apfmon messages muted
[2026-03-09 15:48:53] 2026-03-09 14:48:53,376 [wrapper] ==== wrapper stdout END ====
[2026-03-09 15:48:53] 2026-03-09 14:48:53,379 [wrapper] ==== wrapper stderr END ====
[2026-03-09 15:48:53]  *** Error codes and diagnostics ***
[2026-03-09 15:48:53]     "exeErrorCode": 0,
[2026-03-09 15:48:53]     "exeErrorDiag": "",
[2026-03-09 15:48:53]     "pilotErrorCode": 0,
[2026-03-09 15:48:53]     "pilotErrorDiag": "",
[2026-03-09 15:48:53]  *** Listing of results directory ***
[2026-03-09 15:48:53] total 431608
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc    584627 Mar  9 03:53 pilot3.tar.gz
[2026-03-09 15:48:53] -rwx------. 1 boinc boinc     36322 Mar  9 03:56 runpilot2-wrapper.sh
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc      5111 Mar  9 03:56 queuedata.json
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc       100 Mar  9 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 15:48:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 12:40 run_atlas
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc       105 Mar  9 12:40 job.xml
[2026-03-09 15:48:53] -rw-r--r--. 2 boinc boinc 259594248 Mar  9 12:40 EVNT.48958649._000079.pool.root.1
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc      6559 Mar  9 12:40 init_data.xml
[2026-03-09 15:48:53] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:40 start_atlas.sh
[2026-03-09 15:48:53] drwxrwx--x. 2 boinc boinc      4096 Mar  9 12:40 shared
[2026-03-09 15:48:53] -rw-r--r--. 2 boinc boinc    597981 Mar  9 12:40 input.tar.gz
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc         0 Mar  9 12:40 boinc_lockfile
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc      2620 Mar  9 12:40 pandaJob.out
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc    990710 Mar  9 12:40 agis_schedconf.cvmfs.json
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc       447 Mar  9 12:40 workernode_map.json
[2026-03-09 15:48:53] drwx------. 5 boinc boinc      4096 Mar  9 12:40 pilot3
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc 174534420 Mar  9 15:47 HITS.48958651._002055.pool.root.1
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc       530 Mar  9 15:47 boinc_task_state.xml
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc      1046 Mar  9 15:47 memory_monitor_summary.json
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc   1511578 Mar  9 15:48 agis_ddmendpoints.agis.ALL.json
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc    373214 Mar  9 15:48 log.48958651._002055.job.log.tgz.1
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc      6398 Mar  9 15:48 heartbeat.json
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc      8192 Mar  9 15:48 boinc_mmap_file
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc        28 Mar  9 15:48 wrapper_checkpoint.txt
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc        95 Mar  9 15:48 pilot_heartbeat.json
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc      4830 Mar  9 15:48 pilotlog.txt
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc   1586540 Mar  9 15:48 log.48958651._002055.job.log.1
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc       357 Mar  9 15:48 output.list
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc       620 Mar  9 15:48 runtime_log
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc   1976320 Mar  9 15:48 result.tar.gz
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc      9205 Mar  9 15:48 runtime_log.err
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc       664 Mar  9 15:48 clKODm5xfJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpaYLDmbh6GGo.diag
[2026-03-09 15:48:53] -rw-r--r--. 1 boinc boinc     21116 Mar  9 15:48 stderr.txt
[2026-03-09 15:48:53] HITS file was successfully produced:
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc 174534420 Mar  9 15:47 shared/HITS.pool.root.1
[2026-03-09 15:48:53]  *** Contents of shared directory: ***
[2026-03-09 15:48:53] total 426492
[2026-03-09 15:48:53] -rw-r--r--. 2 boinc boinc 259594248 Mar  9 12:40 ATLAS.root_0
[2026-03-09 15:48:53] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:40 start_atlas.sh
[2026-03-09 15:48:53] -rw-r--r--. 2 boinc boinc    597981 Mar  9 12:40 input.tar.gz
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc 174534420 Mar  9 15:47 HITS.pool.root.1
[2026-03-09 15:48:53] -rw-------. 1 boinc boinc   1976320 Mar  9 15:48 result.tar.gz
15:48:55 (598751): run_atlas exited; CPU time 41655.194875
15:48:55 (598751): called boinc_finish(0)

</stderr_txt>
]]>

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