Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:35:51 (3977388): wrapper (7.7.26015): starting
12:35:51 (3977388): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 12:35:51] Arguments: --nthreads 4
[2026-03-10 12:35:51] Threads: 4
[2026-03-10 12:35:51] Checking for CVMFS
[2026-03-10 12:35:51] No cvmfs_config command found, will try listing directly
[2026-03-10 12:35:51] CVMFS is ok
[2026-03-10 12:35:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 12:35:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 12:35:51] Further information can be found at the LHC@home message board.
[2026-03-10 12:35:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 12:35:51] Checking for apptainer binary...
[2026-03-10 12:35:51] which: no apptainer in ((null))
[2026-03-10 12:35:51] apptainer is not installed, using version from CVMFS
[2026-03-10 12:35:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 12:35:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-10 12:35:51] apptainer works
[2026-03-10 12:35:51] Set ATHENA_PROC_NUMBER=4
[2026-03-10 12:35:51] Set ATHENA_CORE_NUMBER=4
[2026-03-10 12:35:51] Starting ATLAS job with PandaID=7040192187
[2026-03-10 12:35:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 13:52:53]  *** The last 200 lines of the pilot log: ***
[2026-03-10 13:52:53]  protocol_id=None
[2026-03-10 13:52:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 13:52:53]  replicas=None
[2026-03-10 13:52:53]  scope=mc23_13p6TeV
[2026-03-10 13:52:53]  status=None
[2026-03-10 13:52:53]  status_code=0
[2026-03-10 13:52:53]  storage_token=
[2026-03-10 13:52:53]  surl=/var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7040192187/log.48955010._015880.job.log.tgz.1
[2026-03-10 13:52:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/f3/log.48955010._015880.job.log.tgz.1
[2026-03-10 13:52:53]  workdir=None
[2026-03-10 13:52:53] ]
[2026-03-10 13:52:53] 2026-03-10 12:51:18,694 | INFO     | transferring file log.48955010._015880.job.log.tgz.1 from /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7040192187/log.48955010._015880.job.log.tgz.1 to /var/lib/
[2026-03-10 13:52:53] 2026-03-10 12:51:18,695 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7040192187/log.48955010._015880.job.log.tgz.1 /var/lib/boinc/var/slot116/slots/1/
[2026-03-10 13:52:53] 2026-03-10 12:51:18,707 | INFO     | adding to output.list: log.48955010._015880.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/f3/log.48955010._015880.job.log.tg
[2026-03-10 13:52:53] 2026-03-10 12:51:18,708 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 13:52:53] 2026-03-10 12:51:18,708 | INFO     | summary of transferred files:
[2026-03-10 13:52:53] 2026-03-10 12:51:18,708 | INFO     |  -- lfn=log.48955010._015880.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 13:52:53] 2026-03-10 12:51:18,708 | INFO     | stage-out finished correctly
[2026-03-10 13:52:53] 2026-03-10 12:51:18,860 | INFO     | time since job start (4514s) is within the limit (349056.0s)
[2026-03-10 13:52:53] 2026-03-10 12:51:18,982 | INFO     | monitor loop #327: job 0:7040192187 is in state 'finished'
[2026-03-10 13:52:53] 2026-03-10 12:51:18,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 13:52:53] 2026-03-10 12:51:20,865 | INFO     | time since job start (4516s) is within the limit (349056.0s)
[2026-03-10 13:52:53] 2026-03-10 12:51:21,393 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 13:52:53] 2026-03-10 12:51:21,485 | INFO     | monitor loop #328: job 0:7040192187 is in state 'finished'
[2026-03-10 13:52:53] 2026-03-10 12:51:21,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 13:52:53] 2026-03-10 12:51:22,870 | INFO     | time since job start (4518s) is within the limit (349056.0s)
[2026-03-10 13:52:53] 2026-03-10 12:51:23,727 | INFO     | job 7040192187 has state=finished
[2026-03-10 13:52:53] 2026-03-10 12:51:23,727 | INFO     | preparing for final server update for job 7040192187 in state='finished'
[2026-03-10 13:52:53] 2026-03-10 12:51:23,727 | INFO     | reading metadata from: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7040192187/jobReport.json
[2026-03-10 13:52:53] 2026-03-10 12:51:23,729 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot116/slots/1/workernode_map.json
[2026-03-10 13:52:53] 2026-03-10 12:51:23,729 | INFO     | this job has now completed (state=finished)
[2026-03-10 13:52:53] 2026-03-10 12:51:23,729 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 13:52:53] 2026-03-10 12:51:23,729 | INFO     | log transfer has been attempted: DONE
[2026-03-10 13:52:53] 2026-03-10 12:51:23,729 | INFO     | job 7040192187 has finished - writing final server update
[2026-03-10 13:52:53] 2026-03-10 12:51:23,729 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_287099/.job.ad'
[2026-03-10 13:52:53] 2026-03-10 12:51:23,729 | INFO     | total number of processed events: 400 (read)
[2026-03-10 13:52:53] 2026-03-10 12:51:23,747 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7040192187/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 13:52:53] 2026-03-10 12:51:23,747 | INFO     | extracted standard info from prmon json
[2026-03-10 13:52:53] 2026-03-10 12:51:23,747 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 13:52:53] 2026-03-10 12:51:23,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 13:52:53] 2026-03-10 12:51:23,747 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 13:52:53] 2026-03-10 12:51:23,747 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 13:52:53] 2026-03-10 12:51:23,748 | INFO     | fitting pss+swap vs Time
[2026-03-10 13:52:53] 2026-03-10 12:51:23,748 | INFO     | sum of square deviations: 93240818.0
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | sum of deviations: 35294721.99999997
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | mean x: 1773144903.0
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | mean y: 2325957.0597014925
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | intersect: -668867815.7909606
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | chi2: 0.00015719722062125893
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | current memory leak: 0.38 B/s (using 67 data points, chi2=0.00)
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | could have reported an average CPU frequency of 3600 MHz (6 samples)
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | ..............................
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . Timing measurements:
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . get job = 0 s
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . initial setup = 5 s
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . payload setup = 5 s
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . stage-in = 0 s
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . payload execution = 4492 s
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . stage-out = 0 s
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | . log creation = 0 s
[2026-03-10 13:52:53] 2026-03-10 12:51:23,749 | INFO     | ..............................
[2026-03-10 13:52:53] 2026-03-10 12:51:24,018 | INFO     | 
[2026-03-10 13:52:53] 2026-03-10 12:51:24,018 | INFO     | job summary report
[2026-03-10 13:52:53] 2026-03-10 12:51:24,018 | INFO     | --------------------------------------------------
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | PanDA job id: 7040192187
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | task id: 48955010
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | errors: (none)
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | pilot state: finished 
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | transexitcode: 0
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | exeerrorcode: 0
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | exeerrordiag: 
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | exitcode: 0
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | exitmsg: OK
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | cpuconsumptiontime: 17090 s
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | nevents: 400
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | neventsw: 0
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | pid: 3997217
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | pgrp: 3997217
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | corecount: 4
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | event service: False
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | sizes: {0: 2279700, 1: 2280217, 11: 2280217, 4502: 2306390, 4503: 2315412, 4506: 2315468, 4509: 2315790}
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | --------------------------------------------------
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | 
[2026-03-10 13:52:53] 2026-03-10 12:51:24,019 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/1
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 13:52:53] 2026-03-10 12:51:24,038 | INFO     | job 7040192187 has completed (purged errors)
[2026-03-10 13:52:53] 2026-03-10 12:51:24,039 | INFO     | overall cleanup function is called
[2026-03-10 13:52:53] 2026-03-10 12:51:24,482 | INFO     | PID=3985290 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 13:52:53] 2026-03-10 12:51:24,482 | INFO     | .. there are 44 such processes running
[2026-03-10 13:52:53] 2026-03-10 12:51:25,047 | INFO     | --- collectZombieJob: --- 10, [3997217]
[2026-03-10 13:52:53] 2026-03-10 12:51:25,047 | INFO     | zombie collector waiting for pid 3997217
[2026-03-10 13:52:53] 2026-03-10 12:51:25,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 13:52:53] 2026-03-10 12:51:25,047 | INFO     | collected zombie processes
[2026-03-10 13:52:53] 2026-03-10 12:51:25,047 | INFO     | will attempt to kill all subprocesses of pid=3997217
[2026-03-10 13:52:53] 2026-03-10 12:51:25,535 | INFO     | process IDs to be killed: [3997217] (in reverse order)
[2026-03-10 13:52:53] 2026-03-10 12:51:25,763 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 13:52:53] 2026-03-10 12:51:25,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 13:52:53] 2026-03-10 12:51:25,794 | INFO     | did not find any defunct processes belonging to 3997217
[2026-03-10 13:52:53] 2026-03-10 12:51:25,823 | INFO     | did not find any defunct processes belonging to 3997217
[2026-03-10 13:52:53] 2026-03-10 12:51:25,823 | INFO     | ready for new job
[2026-03-10 13:52:53] 2026-03-10 12:51:25,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 13:52:53] 2026-03-10 12:51:25,825 | INFO     | **************************************
[2026-03-10 13:52:53] 2026-03-10 12:51:25,825 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 13:52:53] 2026-03-10 12:51:25,825 | INFO     | **************************************
[2026-03-10 13:52:53] 2026-03-10 12:51:25,825 | INFO     | 
[2026-03-10 13:52:53] 2026-03-10 12:51:25,831 | INFO     | architecture information:
[2026-03-10 13:52:53] 2026-03-10 12:51:25,831 | INFO     | executing command: cat /etc/os-release
[2026-03-10 13:52:53] 2026-03-10 12:51:25,846 | INFO     | cat /etc/os-release:
[2026-03-10 13:52:53] NAME="CentOS Linux"
[2026-03-10 13:52:53] VERSION="7 (Core)"
[2026-03-10 13:52:53] ID="centos"
[2026-03-10 13:52:53] ID_LIKE="rhel fedora"
[2026-03-10 13:52:53] VERSION_ID="7"
[2026-03-10 13:52:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 13:52:53] ANSI_COLOR="0;31"
[2026-03-10 13:52:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 13:52:53] HOME_URL="https://www.centos.org/"
[2026-03-10 13:52:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 13:52:53] 
[2026-03-10 13:52:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 13:52:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 13:52:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 13:52:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 13:52:53] 
[2026-03-10 13:52:53] 2026-03-10 12:51:25,846 | INFO     | **************************************
[2026-03-10 13:52:53] 2026-03-10 12:51:26,348 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-10 13:52:53] 2026-03-10 12:51:26,365 | INFO     | sufficient remaining disk space (19963838464 B)
[2026-03-10 13:52:53] 2026-03-10 12:51:26,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 13:52:53] 2026-03-10 12:51:26,365 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 13:52:53] 2026-03-10 12:51:26,365 | INFO     | update_server=False
[2026-03-10 13:52:53] 2026-03-10 12:51:26,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 13:52:53] 2026-03-10 12:51:26,388 | INFO     | all payload control threads have been joined
[2026-03-10 13:52:53] 2026-03-10 12:51:26,491 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 13:52:53] 2026-03-10 12:51:26,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 13:52:53] 2026-03-10 12:51:26,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 13:52:53] 2026-03-10 12:51:26,491 | INFO     | will abort loop
[2026-03-10 13:52:53] 2026-03-10 12:51:26,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 13:52:53] 2026-03-10 12:51:27,095 | INFO     | all data control threads have been joined
[2026-03-10 13:52:53] 2026-03-10 12:51:27,370 | INFO     | [job] retrieve thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:27,393 | INFO     | [payload] control thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:27,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 13:52:53] 2026-03-10 12:51:27,496 | INFO     | [job] job monitor thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:27,785 | INFO     | all job control threads have been joined
[2026-03-10 13:52:53] 2026-03-10 12:51:27,862 | INFO     | [payload] failed_post thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:27,870 | INFO     | [payload] validate_post thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,100 | INFO     | [data] control thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,301 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,366 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,372 | INFO     | [job] validate thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,651 | INFO     | [data] copytool_in thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,712 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,777 | INFO     | [data] copytool_out thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,790 | INFO     | [job] control thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:28,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 13:52:53] 2026-03-10 12:51:28,847 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:29,810 | INFO     | [job] queue monitor thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:31,454 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 13:52:53] 2026-03-10 12:51:57,136 | INFO     | PID=3985290 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 13:52:53] 2026-03-10 12:51:57,140 | INFO     | .. there are 43 such processes running
[2026-03-10 13:52:53] 2026-03-10 12:51:57,141 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 13:52:53] 2026-03-10 12:51:57,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 13:52:53] 2026-03-10 12:51:57,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 13:52:53] 2026-03-10 12:52:11,575 | INFO     | [monitor] cgroup control has ended
[2026-03-10 13:52:53] 2026-03-10 12:52:12,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23236892968768)>', '<ExcThread(monitor, started 23236648896256)>']
[2026-03-10 13:52:53] 2026-03-10 12:52:13,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 13:52:53] 2026-03-10 12:52:13,218 | INFO     | [monitor] control thread has ended
[2026-03-10 13:52:53] 2026-03-10 12:52:17,605 | INFO     | all workflow threads have been joined
[2026-03-10 13:52:53] 2026-03-10 12:52:17,605 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 13:52:53] 2026-03-10 12:52:17,605 | INFO     | traces error code: 0
[2026-03-10 13:52:53] 2026-03-10 12:52:17,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 13:52:53] 2026-03-10 12:52:17,743 [wrapper] ==== pilot stdout END ====
[2026-03-10 13:52:53] 2026-03-10 12:52:17,746 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 13:52:53] 2026-03-10 12:52:17,748 [wrapper] pilotpid: 3985290
[2026-03-10 13:52:53] 2026-03-10 12:52:17,751 [wrapper] Pilot exit status: 0
[2026-03-10 13:52:53] 2026-03-10 12:52:17,758 [wrapper] pandaids: 7040192187
[2026-03-10 13:52:53] 2026-03-10 12:52:17,895 [wrapper] cleanup supervisor_pilot  549215 3985291
[2026-03-10 13:52:53] 2026-03-10 12:52:17,897 [wrapper] Test setup, not cleaning
[2026-03-10 13:52:53] 2026-03-10 12:52:17,900 [wrapper] apfmon messages muted
[2026-03-10 13:52:53] 2026-03-10 12:52:17,902 [wrapper] ==== wrapper stdout END ====
[2026-03-10 13:52:53] 2026-03-10 12:52:17,904 [wrapper] ==== wrapper stderr END ====
[2026-03-10 13:52:53]  *** Error codes and diagnostics ***
[2026-03-10 13:52:53]     "exeErrorCode": 0,
[2026-03-10 13:52:53]     "exeErrorDiag": "",
[2026-03-10 13:52:53]     "pilotErrorCode": 0,
[2026-03-10 13:52:53]     "pilotErrorDiag": "",
[2026-03-10 13:52:53]  *** Listing of results directory ***
[2026-03-10 13:52:53] total 618768
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc    584627 Mar  8 22:54 pilot3.tar.gz
[2026-03-10 13:52:53] -rwx------. 1 boinc boinc     36322 Mar  8 23:41 runpilot2-wrapper.sh
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc      5111 Mar  8 23:42 queuedata.json
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc       100 Mar 10 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 13:52:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 12:35 run_atlas
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc       105 Mar 10 12:35 job.xml
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc      6708 Mar 10 12:35 init_data.xml
[2026-03-10 13:52:53] -rw-r--r--. 2 boinc boinc 442814800 Mar 10 12:35 EVNT.46701403._001318.pool.root.1
[2026-03-10 13:52:53] -rw-r--r--. 2 boinc boinc     15845 Mar 10 12:35 start_atlas.sh
[2026-03-10 13:52:53] drwxrwx--x. 2 boinc boinc      4096 Mar 10 12:35 shared
[2026-03-10 13:52:53] -rw-r--r--. 2 boinc boinc    597964 Mar 10 12:35 input.tar.gz
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc         0 Mar 10 12:35 boinc_lockfile
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc      2562 Mar 10 12:35 pandaJob.out
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc   1005415 Mar 10 12:35 agis_schedconf.cvmfs.json
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc   1511578 Mar 10 12:35 agis_ddmendpoints.agis.ALL.json
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc       444 Mar 10 12:36 workernode_map.json
[2026-03-10 13:52:53] drwx------. 5 boinc boinc      4096 Mar 10 12:36 pilot3
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc 185032374 Mar 10 13:50 HITS.48955010._015880.pool.root.1
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc       530 Mar 10 13:51 boinc_task_state.xml
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc      1028 Mar 10 13:51 memory_monitor_summary.json
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc    251831 Mar 10 13:51 log.48955010._015880.job.log.tgz.1
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc      6349 Mar 10 13:51 heartbeat.json
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc        95 Mar 10 13:51 pilot_heartbeat.json
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc      5016 Mar 10 13:52 pilotlog.txt
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc    665512 Mar 10 13:52 log.48955010._015880.job.log.1
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc       357 Mar 10 13:52 output.list
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc       620 Mar 10 13:52 runtime_log
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc    931840 Mar 10 13:52 result.tar.gz
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc      9221 Mar 10 13:52 runtime_log.err
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc       662 Mar 10 13:52 U7DNDmZzbJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4WaLDm8M3ban.diag
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc        27 Mar 10 13:52 wrapper_checkpoint.txt
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc      8192 Mar 10 13:52 boinc_mmap_file
[2026-03-10 13:52:53] -rw-r--r--. 1 boinc boinc     21773 Mar 10 13:52 stderr.txt
[2026-03-10 13:52:53] HITS file was successfully produced:
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc 185032374 Mar 10 13:50 shared/HITS.pool.root.1
[2026-03-10 13:52:53]  *** Contents of shared directory: ***
[2026-03-10 13:52:53] total 614656
[2026-03-10 13:52:53] -rw-r--r--. 2 boinc boinc 442814800 Mar 10 12:35 ATLAS.root_0
[2026-03-10 13:52:53] -rw-r--r--. 2 boinc boinc     15845 Mar 10 12:35 start_atlas.sh
[2026-03-10 13:52:53] -rw-r--r--. 2 boinc boinc    597964 Mar 10 12:35 input.tar.gz
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc 185032374 Mar 10 13:50 HITS.pool.root.1
[2026-03-10 13:52:53] -rw-------. 1 boinc boinc    931840 Mar 10 13:52 result.tar.gz
13:52:54 (3977388): run_atlas exited; CPU time 17299.812852
13:52:54 (3977388): called boinc_finish(0)

</stderr_txt>
]]>

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