Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:01 (3578512): wrapper (7.7.26015): starting
04:15:01 (3578512): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 04:15:01] Arguments: --nthreads 4
[2026-03-10 04:15:01] Threads: 4
[2026-03-10 04:15:01] Checking for CVMFS
[2026-03-10 04:15:01] No cvmfs_config command found, will try listing directly
[2026-03-10 04:15:01] CVMFS is ok
[2026-03-10 04:15:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 04:15:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 04:15:01] Further information can be found at the LHC@home message board.
[2026-03-10 04:15:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 04:15:01] Checking for apptainer binary...
[2026-03-10 04:15:01] which: no apptainer in ((null))
[2026-03-10 04:15:01] apptainer is not installed, using version from CVMFS
[2026-03-10 04:15:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 04:15:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot172/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 04:15:01] apptainer works
[2026-03-10 04:15:01] Set ATHENA_PROC_NUMBER=4
[2026-03-10 04:15:01] Set ATHENA_CORE_NUMBER=4
[2026-03-10 04:15:01] Starting ATLAS job with PandaID=7040409174
[2026-03-10 04:15:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot172/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 05:33:29]  *** The last 200 lines of the pilot log: ***
[2026-03-10 05:33:29] ]
[2026-03-10 05:33:29] 2026-03-10 04:32:19,641 | INFO     | transferring file log.48955006._031326.job.log.tgz.1 from /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/log.48955006._031326.job.log.tgz.1 to /var/lib/
[2026-03-10 05:33:29] 2026-03-10 04:32:19,641 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/log.48955006._031326.job.log.tgz.1 /var/lib/boinc/var/slot172/slots/0/
[2026-03-10 05:33:29] 2026-03-10 04:32:19,662 | INFO     | adding to output.list: log.48955006._031326.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/cc/log.48955006._031326.job.log.tg
[2026-03-10 05:33:29] 2026-03-10 04:32:19,662 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 05:33:29] 2026-03-10 04:32:19,665 | INFO     | summary of transferred files:
[2026-03-10 05:33:29] 2026-03-10 04:32:19,665 | INFO     |  -- lfn=log.48955006._031326.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 05:33:29] 2026-03-10 04:32:19,665 | INFO     | stage-out finished correctly
[2026-03-10 05:33:29] 2026-03-10 04:32:19,793 | INFO     | time since job start (4625s) is within the limit (349056.0s)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,123 | WARNING  | process 3596170 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 05:33:29] 2026-03-10 04:32:20,124 | INFO     | using path: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,124 | INFO     | using path: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,124 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 05:33:29] 2026-03-10 04:32:20,124 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 05:33:29] 2026-03-10 04:32:20,125 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2158615 B
[2026-03-10 05:33:29] 2026-03-10 04:32:20,125 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15616 B
[2026-03-10 05:33:29] 2026-03-10 04:32:20,125 | INFO     | executing command: df -mP /var/lib/boinc/var/slot172/slots/0
[2026-03-10 05:33:29] 2026-03-10 04:32:20,141 | INFO     | sufficient remaining disk space (20665335808 B)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,141 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,142 | INFO     | size of work directory /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174: 2457481 B (within 5033164800 B limit)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,142 | INFO     | pfn file=/var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/HITS.48955006._031326.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,142 | INFO     | total size of present files: 0 B (workdir size: 2457481 B)
[2026-03-10 05:33:29] 2026-03-10 04:32:20,142 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/HITS.48955006._031326.pool.root.1 since it does not exist
[2026-03-10 05:33:29] 2026-03-10 04:32:20,461 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 05:33:29] 2026-03-10 04:32:20,647 | INFO     | number of running child processes to parent process 3596170: 1
[2026-03-10 05:33:29] 2026-03-10 04:32:20,647 | INFO     | maximum number of monitored processes: 6
[2026-03-10 05:33:29] 2026-03-10 04:32:21,798 | INFO     | time since job start (4627s) is within the limit (349056.0s)
[2026-03-10 05:33:29] 2026-03-10 04:32:22,727 | INFO     | job 7040409174 has state=finished
[2026-03-10 05:33:29] 2026-03-10 04:32:22,727 | INFO     | preparing for final server update for job 7040409174 in state='finished'
[2026-03-10 05:33:29] 2026-03-10 04:32:22,727 | INFO     | reading metadata from: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/jobReport.json
[2026-03-10 05:33:29] 2026-03-10 04:32:22,729 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot172/slots/0/workernode_map.json
[2026-03-10 05:33:29] 2026-03-10 04:32:22,730 | INFO     | this job has now completed (state=finished)
[2026-03-10 05:33:29] 2026-03-10 04:32:22,730 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 05:33:29] 2026-03-10 04:32:22,730 | INFO     | log transfer has been attempted: DONE
[2026-03-10 05:33:29] 2026-03-10 04:32:22,730 | INFO     | job 7040409174 has finished - writing final server update
[2026-03-10 05:33:29] 2026-03-10 04:32:22,730 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_59840/.job.ad'
[2026-03-10 05:33:29] 2026-03-10 04:32:22,730 | INFO     | total number of processed events: 400 (read)
[2026-03-10 05:33:29] 2026-03-10 04:32:22,748 | INFO     | using path: /var/lib/boinc/var/slot172/slots/0/PanDA_Pilot-7040409174/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:33:29] 2026-03-10 04:32:22,749 | INFO     | extracted standard info from prmon json
[2026-03-10 05:33:29] 2026-03-10 04:32:22,749 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 05:33:29] 2026-03-10 04:32:22,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 05:33:29] 2026-03-10 04:32:22,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 05:33:29] 2026-03-10 04:32:22,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 05:33:29] 2026-03-10 04:32:22,750 | INFO     | fitting pss+swap vs Time
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | sum of square deviations: 101843770.0
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | sum of deviations: -741405285.0
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | mean x: 1773114915.0
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | mean y: 2347676.855072464
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | intersect: 12910322007.4727
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | chi2: 0.0003872200839388089
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | current memory leak: -7.28 B/s (using 69 data points, chi2=0.00)
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | could have reported an average CPU frequency of 3577 MHz (6 samples)
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | ..............................
[2026-03-10 05:33:29] 2026-03-10 04:32:22,751 | INFO     | . Timing measurements:
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | . get job = 0 s
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | . initial setup = 5 s
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | . payload setup = 5 s
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | . stage-in = 0 s
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | . payload execution = 4604 s
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | . stage-out = 0 s
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | . log creation = 0 s
[2026-03-10 05:33:29] 2026-03-10 04:32:22,752 | INFO     | ..............................
[2026-03-10 05:33:29] 2026-03-10 04:32:23,232 | INFO     | 
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | job summary report
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | --------------------------------------------------
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | PanDA job id: 7040409174
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | task id: 48955006
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | errors: (none)
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | pilot state: finished 
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | transexitcode: 0
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | exeerrorcode: 0
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | exeerrordiag: 
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | exitcode: 0
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | exitmsg: OK
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | cpuconsumptiontime: 17435 s
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | nevents: 400
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | neventsw: 0
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | pid: 3596170
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | pgrp: 3596170
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | corecount: 4
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | event service: False
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | sizes: {0: 2279140, 1: 2280270, 11: 2280270, 4613: 2306473, 4614: 2315550, 4615: 2315578, 4618: 2315900}
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | --------------------------------------------------
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | 
[2026-03-10 05:33:29] 2026-03-10 04:32:23,233 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot172/slots/0
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,252 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 05:33:29] 2026-03-10 04:32:23,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,253 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 05:33:29] 2026-03-10 04:32:23,253 | INFO     | job 7040409174 has completed (purged errors)
[2026-03-10 05:33:29] 2026-03-10 04:32:23,253 | INFO     | overall cleanup function is called
[2026-03-10 05:33:29] 2026-03-10 04:32:24,259 | INFO     | --- collectZombieJob: --- 10, [3596170]
[2026-03-10 05:33:29] 2026-03-10 04:32:24,260 | INFO     | zombie collector waiting for pid 3596170
[2026-03-10 05:33:29] 2026-03-10 04:32:24,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 05:33:29] 2026-03-10 04:32:24,260 | INFO     | collected zombie processes
[2026-03-10 05:33:29] 2026-03-10 04:32:24,260 | INFO     | will attempt to kill all subprocesses of pid=3596170
[2026-03-10 05:33:29] 2026-03-10 04:32:24,707 | INFO     | process IDs to be killed: [3596170] (in reverse order)
[2026-03-10 05:33:29] 2026-03-10 04:32:24,930 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 05:33:29] 2026-03-10 04:32:24,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 05:33:29] 2026-03-10 04:32:24,953 | INFO     | did not find any defunct processes belonging to 3596170
[2026-03-10 05:33:29] 2026-03-10 04:32:24,975 | INFO     | did not find any defunct processes belonging to 3596170
[2026-03-10 05:33:29] 2026-03-10 04:32:24,976 | INFO     | ready for new job
[2026-03-10 05:33:29] 2026-03-10 04:32:24,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 05:33:29] 2026-03-10 04:32:24,977 | INFO     | **************************************
[2026-03-10 05:33:29] 2026-03-10 04:32:24,977 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 05:33:29] 2026-03-10 04:32:24,977 | INFO     | **************************************
[2026-03-10 05:33:29] 2026-03-10 04:32:24,977 | INFO     | 
[2026-03-10 05:33:29] 2026-03-10 04:32:24,982 | INFO     | architecture information:
[2026-03-10 05:33:29] 2026-03-10 04:32:24,983 | INFO     | executing command: cat /etc/os-release
[2026-03-10 05:33:29] 2026-03-10 04:32:25,002 | INFO     | cat /etc/os-release:
[2026-03-10 05:33:29] NAME="CentOS Linux"
[2026-03-10 05:33:29] VERSION="7 (Core)"
[2026-03-10 05:33:29] ID="centos"
[2026-03-10 05:33:29] ID_LIKE="rhel fedora"
[2026-03-10 05:33:29] VERSION_ID="7"
[2026-03-10 05:33:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 05:33:29] ANSI_COLOR="0;31"
[2026-03-10 05:33:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 05:33:29] HOME_URL="https://www.centos.org/"
[2026-03-10 05:33:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 05:33:29] 
[2026-03-10 05:33:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 05:33:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 05:33:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 05:33:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 05:33:29] 
[2026-03-10 05:33:29] 2026-03-10 04:32:25,002 | INFO     | **************************************
[2026-03-10 05:33:29] 2026-03-10 04:32:25,505 | INFO     | executing command: df -mP /var/lib/boinc/var/slot172/slots/0
[2026-03-10 05:33:29] 2026-03-10 04:32:25,520 | INFO     | sufficient remaining disk space (20657995776 B)
[2026-03-10 05:33:29] 2026-03-10 04:32:25,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 05:33:29] 2026-03-10 04:32:25,520 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 05:33:29] 2026-03-10 04:32:25,520 | INFO     | update_server=False
[2026-03-10 05:33:29] 2026-03-10 04:32:25,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 05:33:29] 2026-03-10 04:32:25,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 05:33:29] 2026-03-10 04:32:25,653 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 05:33:29] 2026-03-10 04:32:25,654 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 05:33:29] 2026-03-10 04:32:25,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:33:29] 2026-03-10 04:32:25,654 | INFO     | will abort loop
[2026-03-10 05:33:29] 2026-03-10 04:32:26,117 | INFO     | all job control threads have been joined
[2026-03-10 05:33:29] 2026-03-10 04:32:26,434 | INFO     | all payload control threads have been joined
[2026-03-10 05:33:29] 2026-03-10 04:32:26,526 | INFO     | [job] retrieve thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:26,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 05:33:29] 2026-03-10 04:32:26,553 | INFO     | all data control threads have been joined
[2026-03-10 05:33:29] 2026-03-10 04:32:26,659 | INFO     | [job] job monitor thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:26,744 | INFO     | [payload] failed_post thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,122 | INFO     | [job] control thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,256 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,299 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,355 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,396 | INFO     | [job] validate thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,439 | INFO     | [payload] control thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,526 | INFO     | [data] copytool_out thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,558 | INFO     | [data] control thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,759 | INFO     | [data] copytool_in thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:27,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:33:29] 2026-03-10 04:32:27,860 | INFO     | [payload] validate_post thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:28,818 | INFO     | [job] queue monitor thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:30,535 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:36,024 | INFO     | job.realtimelogging is not enabled
[2026-03-10 05:33:29] 2026-03-10 04:32:37,029 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 05:33:29] 2026-03-10 04:32:55,379 | INFO     | PID=3583300 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 05:33:29] 2026-03-10 04:32:55,379 | INFO     | .. there are 61 such processes running
[2026-03-10 05:33:29] 2026-03-10 04:32:55,379 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 05:33:29] 2026-03-10 04:32:55,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 05:33:29] 2026-03-10 04:32:55,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 05:33:29] 2026-03-10 04:33:22,018 | INFO     | [monitor] cgroup control has ended
[2026-03-10 05:33:29] 2026-03-10 04:33:23,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22838747998016)>', '<ExcThread(monitor, started 22838510892800)>']
[2026-03-10 05:33:29] 2026-03-10 04:33:24,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 05:33:29] 2026-03-10 04:33:24,525 | INFO     | [monitor] control thread has ended
[2026-03-10 05:33:29] 2026-03-10 04:33:28,767 | INFO     | all workflow threads have been joined
[2026-03-10 05:33:29] 2026-03-10 04:33:28,768 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 05:33:29] 2026-03-10 04:33:28,768 | INFO     | traces error code: 0
[2026-03-10 05:33:29] 2026-03-10 04:33:28,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 05:33:29] 2026-03-10 04:33:28,937 [wrapper] ==== pilot stdout END ====
[2026-03-10 05:33:29] 2026-03-10 04:33:28,939 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 05:33:29] 2026-03-10 04:33:28,943 [wrapper] pilotpid: 3583300
[2026-03-10 05:33:29] 2026-03-10 04:33:28,946 [wrapper] Pilot exit status: 0
[2026-03-10 05:33:29] 2026-03-10 04:33:28,982 [wrapper] pandaids: 7040409174
[2026-03-10 05:33:29] 2026-03-10 04:33:29,094 [wrapper] cleanup supervisor_pilot  365614 3583301
[2026-03-10 05:33:29] 2026-03-10 04:33:29,102 [wrapper] Test setup, not cleaning
[2026-03-10 05:33:29] 2026-03-10 04:33:29,117 [wrapper] apfmon messages muted
[2026-03-10 05:33:29] 2026-03-10 04:33:29,119 [wrapper] ==== wrapper stdout END ====
[2026-03-10 05:33:29] 2026-03-10 04:33:29,121 [wrapper] ==== wrapper stderr END ====
[2026-03-10 05:33:29]  *** Error codes and diagnostics ***
[2026-03-10 05:33:29]     "exeErrorCode": 0,
[2026-03-10 05:33:29]     "exeErrorDiag": "",
[2026-03-10 05:33:29]     "pilotErrorCode": 0,
[2026-03-10 05:33:29]     "pilotErrorDiag": "",
[2026-03-10 05:33:29]  *** Listing of results directory ***
[2026-03-10 05:33:29] total 605076
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc    584627 Mar  9 03:02 pilot3.tar.gz
[2026-03-10 05:33:29] -rwx------. 1 boinc boinc     36322 Mar  9 03:05 runpilot2-wrapper.sh
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc      5111 Mar  9 03:07 queuedata.json
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc       100 Mar 10 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 05:33:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 04:14 run_atlas
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc       105 Mar 10 04:14 job.xml
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc      6707 Mar 10 04:15 init_data.xml
[2026-03-10 05:33:29] -rw-r--r--. 2 boinc boinc 437189781 Mar 10 04:15 EVNT.46701403._000627.pool.root.1
[2026-03-10 05:33:29] -rw-r--r--. 2 boinc boinc     15845 Mar 10 04:15 start_atlas.sh
[2026-03-10 05:33:29] drwxrwx--x. 2 boinc boinc      4096 Mar 10 04:15 shared
[2026-03-10 05:33:29] -rw-r--r--. 2 boinc boinc    597958 Mar 10 04:15 input.tar.gz
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc         0 Mar 10 04:15 boinc_lockfile
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc      2564 Mar 10 04:15 pandaJob.out
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc   1006495 Mar 10 04:15 agis_schedconf.cvmfs.json
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc   1511578 Mar 10 04:15 agis_ddmendpoints.agis.ALL.json
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc       444 Mar 10 04:15 workernode_map.json
[2026-03-10 05:33:29] drwx------. 5 boinc boinc      4096 Mar 10 04:15 pilot3
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc       531 Mar 10 05:31 boinc_task_state.xml
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc 176587356 Mar 10 05:31 HITS.48955006._031326.pool.root.1
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc      1032 Mar 10 05:32 memory_monitor_summary.json
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc    257126 Mar 10 05:32 log.48955006._031326.job.log.tgz.1
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc      6358 Mar 10 05:32 heartbeat.json
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc        95 Mar 10 05:32 pilot_heartbeat.json
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc      8192 Mar 10 05:33 boinc_mmap_file
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc        27 Mar 10 05:33 wrapper_checkpoint.txt
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc      5088 Mar 10 05:33 pilotlog.txt
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc    682942 Mar 10 05:33 log.48955006._031326.job.log.1
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc       357 Mar 10 05:33 output.list
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc       620 Mar 10 05:33 runtime_log
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc    962560 Mar 10 05:33 result.tar.gz
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc      9221 Mar 10 05:33 runtime_log.err
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc       663 Mar 10 05:33 jCWLDmUBfJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmn3aLDm88Idlm.diag
[2026-03-10 05:33:29] -rw-r--r--. 1 boinc boinc     22577 Mar 10 05:33 stderr.txt
[2026-03-10 05:33:29] HITS file was successfully produced:
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc 176587356 Mar 10 05:31 shared/HITS.pool.root.1
[2026-03-10 05:33:29]  *** Contents of shared directory: ***
[2026-03-10 05:33:29] total 600944
[2026-03-10 05:33:29] -rw-r--r--. 2 boinc boinc 437189781 Mar 10 04:15 ATLAS.root_0
[2026-03-10 05:33:29] -rw-r--r--. 2 boinc boinc     15845 Mar 10 04:15 start_atlas.sh
[2026-03-10 05:33:29] -rw-r--r--. 2 boinc boinc    597958 Mar 10 04:15 input.tar.gz
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc 176587356 Mar 10 05:31 HITS.pool.root.1
[2026-03-10 05:33:29] -rw-------. 1 boinc boinc    962560 Mar 10 05:33 result.tar.gz
05:33:31 (3578512): run_atlas exited; CPU time 17618.574960
05:33:31 (3578512): called boinc_finish(0)

</stderr_txt>
]]>

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