Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:55 (3840711): wrapper (7.7.26015): starting
00:25:55 (3840711): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 00:25:55] Arguments: --nthreads 4
[2026-03-10 00:25:55] Threads: 4
[2026-03-10 00:25:55] Checking for CVMFS
[2026-03-10 00:25:55] No cvmfs_config command found, will try listing directly
[2026-03-10 00:25:55] CVMFS is ok
[2026-03-10 00:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 00:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 00:25:55] Further information can be found at the LHC@home message board.
[2026-03-10 00:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 00:25:55] Checking for apptainer binary...
[2026-03-10 00:25:55] which: no apptainer in ((null))
[2026-03-10 00:25:55] apptainer is not installed, using version from CVMFS
[2026-03-10 00:25:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 00:25:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-10 00:25:55] apptainer works
[2026-03-10 00:25:55] Set ATHENA_PROC_NUMBER=4
[2026-03-10 00:25:55] Set ATHENA_CORE_NUMBER=4
[2026-03-10 00:25:55] Starting ATLAS job with PandaID=7040408539
[2026-03-10 00:25:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 01:46:20]  *** The last 200 lines of the pilot log: ***
[2026-03-10 01:46:20]  is_altstaged=None
[2026-03-10 01:46:20]  is_tar=False
[2026-03-10 01:46:20]  lfn=log.48955006._031103.job.log.tgz.1
[2026-03-10 01:46:20]  mtime=0
[2026-03-10 01:46:20]  protocol_id=None
[2026-03-10 01:46:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 01:46:20]  replicas=None
[2026-03-10 01:46:20]  scope=mc23_13p6TeV
[2026-03-10 01:46:20]  status=None
[2026-03-10 01:46:20]  status_code=0
[2026-03-10 01:46:20]  storage_token=
[2026-03-10 01:46:20]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7040408539/log.48955006._031103.job.log.tgz.1
[2026-03-10 01:46:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/0f/log.48955006._031103.job.log.tgz.1
[2026-03-10 01:46:20]  workdir=None
[2026-03-10 01:46:20] ]
[2026-03-10 01:46:20] 2026-03-10 00:45:25,190 | INFO     | transferring file log.48955006._031103.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7040408539/log.48955006._031103.job.log.tgz.1 to /var/lib/
[2026-03-10 01:46:20] 2026-03-10 00:45:25,190 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7040408539/log.48955006._031103.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-03-10 01:46:20] 2026-03-10 00:45:25,204 | INFO     | adding to output.list: log.48955006._031103.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/0f/log.48955006._031103.job.log.tg
[2026-03-10 01:46:20] 2026-03-10 00:45:25,205 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 01:46:20] 2026-03-10 00:45:25,205 | INFO     | summary of transferred files:
[2026-03-10 01:46:20] 2026-03-10 00:45:25,205 | INFO     |  -- lfn=log.48955006._031103.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 01:46:20] 2026-03-10 00:45:25,205 | INFO     | stage-out finished correctly
[2026-03-10 01:46:20] 2026-03-10 00:45:26,696 | INFO     | time since job start (4760s) is within the limit (349056.0s)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,193 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 01:46:20] 2026-03-10 00:45:27,240 | INFO     | job 7040408539 has state=finished
[2026-03-10 01:46:20] 2026-03-10 00:45:27,240 | INFO     | preparing for final server update for job 7040408539 in state='finished'
[2026-03-10 01:46:20] 2026-03-10 00:45:27,240 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7040408539/jobReport.json
[2026-03-10 01:46:20] 2026-03-10 00:45:27,242 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-03-10 01:46:20] 2026-03-10 00:45:27,242 | INFO     | this job has now completed (state=finished)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,242 | INFO     | log transfer has been attempted: DONE
[2026-03-10 01:46:20] 2026-03-10 00:45:27,242 | INFO     | job 7040408539 has finished - writing final server update
[2026-03-10 01:46:20] 2026-03-10 00:45:27,242 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3548211/.job.ad'
[2026-03-10 01:46:20] 2026-03-10 00:45:27,242 | INFO     | total number of processed events: 400 (read)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,260 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7040408539/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,260 | INFO     | extracted standard info from prmon json
[2026-03-10 01:46:20] 2026-03-10 00:45:27,260 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 01:46:20] 2026-03-10 00:45:27,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 01:46:20] 2026-03-10 00:45:27,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 01:46:20] 2026-03-10 00:45:27,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | fitting pss+swap vs Time
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | sum of square deviations: 110960220.0
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | sum of deviations: -516295704.0
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | mean x: 1773101227.0
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | mean y: 2335027.8450704226
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | intersect: 8252539887.363453
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | chi2: 0.0001412087730496533
[2026-03-10 01:46:20] 2026-03-10 00:45:27,262 | INFO     | current memory leak: -4.65 B/s (using 71 data points, chi2=0.00)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | could have reported an average CPU frequency of 3599 MHz (6 samples)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | ..............................
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . Timing measurements:
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . get job = 0 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . initial setup = 4 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . payload setup = 4 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . stage-in = 0 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . payload execution = 4738 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . stage-out = 0 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | . log creation = 0 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,263 | INFO     | ..............................
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | 
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | job summary report
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | --------------------------------------------------
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | PanDA job id: 7040408539
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | task id: 48955006
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | errors: (none)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | pilot state: finished 
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | transexitcode: 0
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | exeerrorcode: 0
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | exeerrordiag: 
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | exitcode: 0
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | exitmsg: OK
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | cpuconsumptiontime: 18057 s
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | nevents: 400
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | neventsw: 0
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | pid: 3851878
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | pgrp: 3851878
[2026-03-10 01:46:20] 2026-03-10 00:45:27,311 | INFO     | corecount: 4
[2026-03-10 01:46:20] 2026-03-10 00:45:27,312 | INFO     | event service: False
[2026-03-10 01:46:20] 2026-03-10 00:45:27,312 | INFO     | sizes: {0: 2279142, 1: 2280272, 11: 2280272, 4747: 2306531, 4748: 2315553, 4750: 2315931}
[2026-03-10 01:46:20] 2026-03-10 00:45:27,312 | INFO     | --------------------------------------------------
[2026-03-10 01:46:20] 2026-03-10 00:45:27,312 | INFO     | 
[2026-03-10 01:46:20] 2026-03-10 00:45:27,312 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,329 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 01:46:20] 2026-03-10 00:45:27,330 | INFO     | job 7040408539 has completed (purged errors)
[2026-03-10 01:46:20] 2026-03-10 00:45:27,330 | INFO     | overall cleanup function is called
[2026-03-10 01:46:20] 2026-03-10 00:45:27,821 | WARNING  | process 3851878 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 01:46:20] 2026-03-10 00:45:28,098 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 01:46:20] 2026-03-10 00:45:28,337 | INFO     | --- collectZombieJob: --- 10, [3851878]
[2026-03-10 01:46:20] 2026-03-10 00:45:28,339 | INFO     | zombie collector waiting for pid 3851878
[2026-03-10 01:46:20] 2026-03-10 00:45:28,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 01:46:20] 2026-03-10 00:45:28,339 | INFO     | collected zombie processes
[2026-03-10 01:46:20] 2026-03-10 00:45:28,339 | INFO     | will attempt to kill all subprocesses of pid=3851878
[2026-03-10 01:46:20] 2026-03-10 00:45:29,019 | INFO     | number of running child processes to parent process 3851878: 1
[2026-03-10 01:46:20] 2026-03-10 00:45:29,019 | INFO     | maximum number of monitored processes: 6
[2026-03-10 01:46:20] 2026-03-10 00:45:29,020 | INFO     | aborting job monitoring since job object (job id=7040408539) has expired
[2026-03-10 01:46:20] 2026-03-10 00:45:29,172 | INFO     | process IDs to be killed: [3851878] (in reverse order)
[2026-03-10 01:46:20] 2026-03-10 00:45:29,395 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 01:46:20] 2026-03-10 00:45:29,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 01:46:20] 2026-03-10 00:45:29,420 | INFO     | did not find any defunct processes belonging to 3851878
[2026-03-10 01:46:20] 2026-03-10 00:45:29,442 | INFO     | did not find any defunct processes belonging to 3851878
[2026-03-10 01:46:20] 2026-03-10 00:45:29,442 | INFO     | ready for new job
[2026-03-10 01:46:20] 2026-03-10 00:45:29,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 01:46:20] 2026-03-10 00:45:29,443 | INFO     | **************************************
[2026-03-10 01:46:20] 2026-03-10 00:45:29,443 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 01:46:20] 2026-03-10 00:45:29,443 | INFO     | **************************************
[2026-03-10 01:46:20] 2026-03-10 00:45:29,443 | INFO     | 
[2026-03-10 01:46:20] 2026-03-10 00:45:29,449 | INFO     | architecture information:
[2026-03-10 01:46:20] 2026-03-10 00:45:29,449 | INFO     | executing command: cat /etc/os-release
[2026-03-10 01:46:20] 2026-03-10 00:45:29,464 | INFO     | cat /etc/os-release:
[2026-03-10 01:46:20] NAME="CentOS Linux"
[2026-03-10 01:46:20] VERSION="7 (Core)"
[2026-03-10 01:46:20] ID="centos"
[2026-03-10 01:46:20] ID_LIKE="rhel fedora"
[2026-03-10 01:46:20] VERSION_ID="7"
[2026-03-10 01:46:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 01:46:20] ANSI_COLOR="0;31"
[2026-03-10 01:46:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 01:46:20] HOME_URL="https://www.centos.org/"
[2026-03-10 01:46:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 01:46:20] 
[2026-03-10 01:46:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 01:46:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 01:46:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 01:46:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 01:46:20] 
[2026-03-10 01:46:20] 2026-03-10 00:45:29,465 | INFO     | **************************************
[2026-03-10 01:46:20] 2026-03-10 00:45:29,967 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-10 01:46:20] 2026-03-10 00:45:29,984 | INFO     | sufficient remaining disk space (20964179968 B)
[2026-03-10 01:46:20] 2026-03-10 00:45:29,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 01:46:20] 2026-03-10 00:45:29,984 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 01:46:20] 2026-03-10 00:45:29,984 | INFO     | update_server=False
[2026-03-10 01:46:20] 2026-03-10 00:45:29,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 01:46:20] 2026-03-10 00:45:29,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:46:20] 2026-03-10 00:45:29,985 | INFO     | will abort loop
[2026-03-10 01:46:20] 2026-03-10 00:45:30,110 | INFO     | all job control threads have been joined
[2026-03-10 01:46:20] 2026-03-10 00:45:30,315 | INFO     | all data control threads have been joined
[2026-03-10 01:46:20] 2026-03-10 00:45:30,580 | INFO     | all payload control threads have been joined
[2026-03-10 01:46:20] 2026-03-10 00:45:30,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 01:46:20] 2026-03-10 00:45:30,989 | INFO     | [job] retrieve thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:30,990 | INFO     | [job] job monitor thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,099 | INFO     | [job] validate thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,115 | INFO     | [job] control thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,185 | INFO     | [payload] failed_post thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,304 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,320 | INFO     | [data] control thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,517 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,585 | INFO     | [payload] control thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,669 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:31,690 | INFO     | [data] copytool_in thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:32,105 | INFO     | [payload] validate_post thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:32,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:46:20] 2026-03-10 00:45:32,750 | INFO     | [data] copytool_out thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:33,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 01:46:20] 2026-03-10 00:45:33,329 | INFO     | [job] queue monitor thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:37,255 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:45:40,598 | INFO     | job.realtimelogging is not enabled
[2026-03-10 01:46:20] 2026-03-10 00:45:41,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 01:46:20] 2026-03-10 00:46:00,241 | INFO     | PID=3845221 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 01:46:20] 2026-03-10 00:46:00,242 | INFO     | .. there are 60 such processes running
[2026-03-10 01:46:20] 2026-03-10 00:46:00,242 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 01:46:20] 2026-03-10 00:46:00,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 01:46:20] 2026-03-10 00:46:00,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 01:46:20] 2026-03-10 00:46:14,199 | INFO     | [monitor] cgroup control has ended
[2026-03-10 01:46:20] 2026-03-10 00:46:14,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23312574457664)>', '<ExcThread(monitor, started 23312268769024)>']
[2026-03-10 01:46:20] 2026-03-10 00:46:15,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 01:46:20] 2026-03-10 00:46:15,318 | INFO     | [monitor] control thread has ended
[2026-03-10 01:46:20] 2026-03-10 00:46:19,807 | INFO     | all workflow threads have been joined
[2026-03-10 01:46:20] 2026-03-10 00:46:19,807 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 01:46:20] 2026-03-10 00:46:19,807 | INFO     | traces error code: 0
[2026-03-10 01:46:20] 2026-03-10 00:46:19,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 01:46:20] 2026-03-10 00:46:19,978 [wrapper] ==== pilot stdout END ====
[2026-03-10 01:46:20] 2026-03-10 00:46:19,981 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 01:46:20] 2026-03-10 00:46:19,983 [wrapper] pilotpid: 3845221
[2026-03-10 01:46:20] 2026-03-10 00:46:19,985 [wrapper] Pilot exit status: 0
[2026-03-10 01:46:20] 2026-03-10 00:46:19,992 [wrapper] pandaids: 7040408539
[2026-03-10 01:46:20] 2026-03-10 00:46:20,104 [wrapper] cleanup supervisor_pilot  571666 3845222
[2026-03-10 01:46:20] 2026-03-10 00:46:20,107 [wrapper] Test setup, not cleaning
[2026-03-10 01:46:20] 2026-03-10 00:46:20,110 [wrapper] apfmon messages muted
[2026-03-10 01:46:20] 2026-03-10 00:46:20,112 [wrapper] ==== wrapper stdout END ====
[2026-03-10 01:46:20] 2026-03-10 00:46:20,115 [wrapper] ==== wrapper stderr END ====
[2026-03-10 01:46:20]  *** Error codes and diagnostics ***
[2026-03-10 01:46:20]     "exeErrorCode": 0,
[2026-03-10 01:46:20]     "exeErrorDiag": "",
[2026-03-10 01:46:20]     "pilotErrorCode": 0,
[2026-03-10 01:46:20]     "pilotErrorDiag": "",
[2026-03-10 01:46:20]  *** Listing of results directory ***
[2026-03-10 01:46:20] total 610492
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc    584627 Mar  9 03:02 pilot3.tar.gz
[2026-03-10 01:46:20] -rwx------. 1 boinc boinc     36322 Mar  9 03:05 runpilot2-wrapper.sh
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc      5111 Mar  9 03:06 queuedata.json
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc       100 Mar 10 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 01:46:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 00:25 run_atlas
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc       105 Mar 10 00:25 job.xml
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc      6709 Mar 10 00:25 init_data.xml
[2026-03-10 01:46:20] -rw-r--r--. 2 boinc boinc 438142030 Mar 10 00:25 EVNT.46701403._000622.pool.root.1
[2026-03-10 01:46:20] -rw-r--r--. 2 boinc boinc     15845 Mar 10 00:25 start_atlas.sh
[2026-03-10 01:46:20] drwxrwx--x. 2 boinc boinc      4096 Mar 10 00:25 shared
[2026-03-10 01:46:20] -rw-r--r--. 2 boinc boinc    597952 Mar 10 00:25 input.tar.gz
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc         0 Mar 10 00:25 boinc_lockfile
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc      2565 Mar 10 00:25 pandaJob.out
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc   1002738 Mar 10 00:26 agis_schedconf.cvmfs.json
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc   1511578 Mar 10 00:26 agis_ddmendpoints.agis.ALL.json
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc       444 Mar 10 00:26 workernode_map.json
[2026-03-10 01:46:20] drwx------. 5 boinc boinc      4096 Mar 10 00:26 pilot3
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc 181079915 Mar 10 01:45 HITS.48955006._031103.pool.root.1
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc      1043 Mar 10 01:45 memory_monitor_summary.json
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc    290592 Mar 10 01:45 log.48955006._031103.job.log.tgz.1
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc      6357 Mar 10 01:45 heartbeat.json
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc       530 Mar 10 01:45 boinc_task_state.xml
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc      8192 Mar 10 01:45 boinc_mmap_file
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc        27 Mar 10 01:45 wrapper_checkpoint.txt
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc        95 Mar 10 01:46 pilot_heartbeat.json
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc      4904 Mar 10 01:46 pilotlog.txt
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc    700794 Mar 10 01:46 log.48955006._031103.job.log.1
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc       357 Mar 10 01:46 output.list
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc       620 Mar 10 01:46 runtime_log
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc   1013760 Mar 10 01:46 result.tar.gz
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc      9221 Mar 10 01:46 runtime_log.err
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc       662 Mar 10 01:46 megNDmKBfJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmt1aLDmK5DUem.diag
[2026-03-10 01:46:20] -rw-r--r--. 1 boinc boinc     21356 Mar 10 01:46 stderr.txt
[2026-03-10 01:46:20] HITS file was successfully produced:
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc 181079915 Mar 10 01:45 shared/HITS.pool.root.1
[2026-03-10 01:46:20]  *** Contents of shared directory: ***
[2026-03-10 01:46:20] total 606312
[2026-03-10 01:46:20] -rw-r--r--. 2 boinc boinc 438142030 Mar 10 00:25 ATLAS.root_0
[2026-03-10 01:46:20] -rw-r--r--. 2 boinc boinc     15845 Mar 10 00:25 start_atlas.sh
[2026-03-10 01:46:20] -rw-r--r--. 2 boinc boinc    597952 Mar 10 00:25 input.tar.gz
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc 181079915 Mar 10 01:45 HITS.pool.root.1
[2026-03-10 01:46:20] -rw-------. 1 boinc boinc   1013760 Mar 10 01:46 result.tar.gz
01:46:21 (3840711): run_atlas exited; CPU time 18228.623006
01:46:21 (3840711): called boinc_finish(0)

</stderr_txt>
]]>

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