Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:17:58 (3485808): wrapper (7.7.26015): starting
10:17:58 (3485808): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 10:17:58] Arguments: --nthreads 4
[2026-03-09 10:17:58] Threads: 4
[2026-03-09 10:17:58] Checking for CVMFS
[2026-03-09 10:17:58] No cvmfs_config command found, will try listing directly
[2026-03-09 10:17:58] CVMFS is ok
[2026-03-09 10:17:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 10:17:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 10:17:58] Further information can be found at the LHC@home message board.
[2026-03-09 10:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 10:17:58] Checking for apptainer binary...
[2026-03-09 10:17:58] which: no apptainer in ((null))
[2026-03-09 10:17:58] apptainer is not installed, using version from CVMFS
[2026-03-09 10:17:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 10:17:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-09 10:17:59] apptainer works
[2026-03-09 10:17:59] Set ATHENA_PROC_NUMBER=4
[2026-03-09 10:17:59] Set ATHENA_CORE_NUMBER=4
[2026-03-09 10:17:59] Starting ATLAS job with PandaID=7046722764
[2026-03-09 10:17:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 11:39:45]  *** The last 200 lines of the pilot log: ***
[2026-03-09 11:39:45]  lfn=log.48958651._001862.job.log.tgz.1
[2026-03-09 11:39:45]  mtime=0
[2026-03-09 11:39:45]  protocol_id=None
[2026-03-09 11:39:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 11:39:45]  replicas=None
[2026-03-09 11:39:45]  scope=mc23_13p6TeV
[2026-03-09 11:39:45]  status=None
[2026-03-09 11:39:45]  status_code=0
[2026-03-09 11:39:45]  storage_token=
[2026-03-09 11:39:45]  surl=/var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7046722764/log.48958651._001862.job.log.tgz.1
[2026-03-09 11:39:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/75/log.48958651._001862.job.log.tgz.1
[2026-03-09 11:39:45]  workdir=None
[2026-03-09 11:39:45] ]
[2026-03-09 11:39:45] 2026-03-09 10:38:39,826 | INFO     | transferring file log.48958651._001862.job.log.tgz.1 from /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7046722764/log.48958651._001862.job.log.tgz.1 to /var/lib/
[2026-03-09 11:39:45] 2026-03-09 10:38:39,826 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7046722764/log.48958651._001862.job.log.tgz.1 /var/lib/boinc/var/slot244/slots/0/
[2026-03-09 11:39:45] 2026-03-09 10:38:39,847 | INFO     | adding to output.list: log.48958651._001862.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/75/log.48958651._001862.job.log.tg
[2026-03-09 11:39:45] 2026-03-09 10:38:39,847 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 11:39:45] 2026-03-09 10:38:39,847 | INFO     | summary of transferred files:
[2026-03-09 11:39:45] 2026-03-09 10:38:39,847 | INFO     |  -- lfn=log.48958651._001862.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 11:39:45] 2026-03-09 10:38:39,847 | INFO     | stage-out finished correctly
[2026-03-09 11:39:45] 2026-03-09 10:38:40,334 | INFO     | time since job start (4809s) is within the limit (349056.0s)
[2026-03-09 11:39:45] 2026-03-09 10:38:42,020 | INFO     | monitor loop #349: job 0:7046722764 is in state 'finished'
[2026-03-09 11:39:45] 2026-03-09 10:38:42,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 11:39:45] 2026-03-09 10:38:42,314 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 11:39:45] 2026-03-09 10:38:42,344 | INFO     | time since job start (4811s) is within the limit (349056.0s)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,151 | INFO     | job 7046722764 has state=finished
[2026-03-09 11:39:45] 2026-03-09 10:38:44,151 | INFO     | preparing for final server update for job 7046722764 in state='finished'
[2026-03-09 11:39:45] 2026-03-09 10:38:44,354 | INFO     | time since job start (4813s) is within the limit (349056.0s)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,523 | INFO     | monitor loop #350: job 0:7046722764 is in state 'finished'
[2026-03-09 11:39:45] 2026-03-09 10:38:44,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,701 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,702 | INFO     | reading metadata from: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7046722764/jobReport.json
[2026-03-09 11:39:45] 2026-03-09 10:38:44,703 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot244/slots/0/workernode_map.json
[2026-03-09 11:39:45] 2026-03-09 10:38:44,703 | INFO     | this job has now completed (state=finished)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,703 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,703 | INFO     | log transfer has been attempted: DONE
[2026-03-09 11:39:45] 2026-03-09 10:38:44,703 | INFO     | job 7046722764 has finished - writing final server update
[2026-03-09 11:39:45] 2026-03-09 10:38:44,704 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19534/.job.ad'
[2026-03-09 11:39:45] 2026-03-09 10:38:44,704 | INFO     | total number of processed events: 400 (read)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,721 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7046722764/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,721 | INFO     | extracted standard info from prmon json
[2026-03-09 11:39:45] 2026-03-09 10:38:44,721 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 11:39:45] 2026-03-09 10:38:44,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 11:39:45] 2026-03-09 10:38:44,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 11:39:45] 2026-03-09 10:38:44,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | fitting pss+swap vs Time
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | sum of square deviations: 115715658.0
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | sum of deviations: -4708565844.0
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | mean x: 1773050414.5
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | mean y: 2375325.388888889
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | intersect: 72149263358.50833
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | chi2: 0.0241710369522973
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | current memory leak: -40.69 B/s (using 72 data points, chi2=0.02)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,723 | INFO     | could have reported an average CPU frequency of 3558 MHz (6 samples)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | ..............................
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . Timing measurements:
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . get job = 0 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . initial setup = 12 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . payload setup = 11 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . stage-in = 0 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . payload execution = 4781 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . stage-out = 0 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | . log creation = 0 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,724 | INFO     | ..............................
[2026-03-09 11:39:45] 2026-03-09 10:38:44,772 | INFO     | 
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | job summary report
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | --------------------------------------------------
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | PanDA job id: 7046722764
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | task id: 48958651
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | errors: (none)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | pilot state: finished 
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | transexitcode: 0
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | exeerrorcode: 0
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | exeerrordiag: 
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | exitcode: 0
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | exitmsg: OK
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | cpuconsumptiontime: 18242 s
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | nevents: 400
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | neventsw: 0
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | pid: 3497290
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | pgrp: 3497290
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | corecount: 4
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | event service: False
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | sizes: {0: 2279190, 1: 2280320, 12: 2280320, 4796: 2306587, 4797: 2315609, 4799: 2315665, 4802: 2315987}
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | --------------------------------------------------
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | 
[2026-03-09 11:39:45] 2026-03-09 10:38:44,773 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,795 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 11:39:45] 2026-03-09 10:38:44,796 | INFO     | job 7046722764 has completed (purged errors)
[2026-03-09 11:39:45] 2026-03-09 10:38:44,796 | INFO     | overall cleanup function is called
[2026-03-09 11:39:45] 2026-03-09 10:38:45,802 | INFO     | --- collectZombieJob: --- 10, [3497290]
[2026-03-09 11:39:45] 2026-03-09 10:38:45,802 | INFO     | zombie collector waiting for pid 3497290
[2026-03-09 11:39:45] 2026-03-09 10:38:45,802 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 11:39:45] 2026-03-09 10:38:45,802 | INFO     | collected zombie processes
[2026-03-09 11:39:45] 2026-03-09 10:38:45,802 | INFO     | will attempt to kill all subprocesses of pid=3497290
[2026-03-09 11:39:45] 2026-03-09 10:38:46,371 | INFO     | process IDs to be killed: [3497290] (in reverse order)
[2026-03-09 11:39:45] 2026-03-09 10:38:46,647 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 11:39:45] 2026-03-09 10:38:46,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 11:39:45] 2026-03-09 10:38:46,677 | INFO     | did not find any defunct processes belonging to 3497290
[2026-03-09 11:39:45] 2026-03-09 10:38:46,704 | INFO     | did not find any defunct processes belonging to 3497290
[2026-03-09 11:39:45] 2026-03-09 10:38:46,705 | INFO     | ready for new job
[2026-03-09 11:39:45] 2026-03-09 10:38:46,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 11:39:45] 2026-03-09 10:38:46,706 | INFO     | **************************************
[2026-03-09 11:39:45] 2026-03-09 10:38:46,706 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 11:39:45] 2026-03-09 10:38:46,706 | INFO     | **************************************
[2026-03-09 11:39:45] 2026-03-09 10:38:46,706 | INFO     | 
[2026-03-09 11:39:45] 2026-03-09 10:38:46,711 | INFO     | architecture information:
[2026-03-09 11:39:45] 2026-03-09 10:38:46,712 | INFO     | executing command: cat /etc/os-release
[2026-03-09 11:39:45] 2026-03-09 10:38:46,750 | INFO     | cat /etc/os-release:
[2026-03-09 11:39:45] NAME="CentOS Linux"
[2026-03-09 11:39:45] VERSION="7 (Core)"
[2026-03-09 11:39:45] ID="centos"
[2026-03-09 11:39:45] ID_LIKE="rhel fedora"
[2026-03-09 11:39:45] VERSION_ID="7"
[2026-03-09 11:39:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 11:39:45] ANSI_COLOR="0;31"
[2026-03-09 11:39:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 11:39:45] HOME_URL="https://www.centos.org/"
[2026-03-09 11:39:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 11:39:45] 
[2026-03-09 11:39:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 11:39:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 11:39:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 11:39:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 11:39:45] 
[2026-03-09 11:39:45] 2026-03-09 10:38:46,750 | INFO     | **************************************
[2026-03-09 11:39:45] 2026-03-09 10:38:47,253 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-09 11:39:45] 2026-03-09 10:38:47,271 | INFO     | sufficient remaining disk space (20258488320 B)
[2026-03-09 11:39:45] 2026-03-09 10:38:47,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 11:39:45] 2026-03-09 10:38:47,272 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 11:39:45] 2026-03-09 10:38:47,272 | INFO     | update_server=False
[2026-03-09 11:39:45] 2026-03-09 10:38:47,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 11:39:45] 2026-03-09 10:38:47,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 11:39:45] 2026-03-09 10:38:47,930 | INFO     | all job control threads have been joined
[2026-03-09 11:39:45] 2026-03-09 10:38:48,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:39:45] 2026-03-09 10:38:48,031 | INFO     | aborting loop
[2026-03-09 11:39:45] 2026-03-09 10:38:48,093 | INFO     | all data control threads have been joined
[2026-03-09 11:39:45] 2026-03-09 10:38:48,277 | INFO     | [job] retrieve thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:48,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 11:39:45] 2026-03-09 10:38:48,436 | INFO     | [data] copytool_in thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:48,451 | INFO     | [payload] failed_post thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:48,470 | INFO     | all payload control threads have been joined
[2026-03-09 11:39:45] 2026-03-09 10:38:48,935 | INFO     | [job] control thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,036 | INFO     | [job] job monitor thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,098 | INFO     | [data] control thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,109 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,353 | INFO     | [job] validate thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,426 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,475 | INFO     | [payload] control thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,658 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,734 | INFO     | [payload] validate_post thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:49,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:39:45] 2026-03-09 10:38:49,908 | INFO     | [data] copytool_out thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:50,788 | INFO     | [job] queue monitor thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:52,376 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:38:58,034 | INFO     | job.realtimelogging is not enabled
[2026-03-09 11:39:45] 2026-03-09 10:38:59,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 11:39:45] 2026-03-09 10:39:17,976 | INFO     | PID=3490906 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 11:39:45] 2026-03-09 10:39:17,976 | INFO     | .. there are 50 such processes running
[2026-03-09 11:39:45] 2026-03-09 10:39:17,977 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 11:39:45] 2026-03-09 10:39:17,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 11:39:45] 2026-03-09 10:39:17,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 11:39:45] 2026-03-09 10:39:39,224 | INFO     | [monitor] cgroup control has ended
[2026-03-09 11:39:45] 2026-03-09 10:39:39,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22644154263360)>', '<ExcThread(monitor, started 22643916158720)>']
[2026-03-09 11:39:45] 2026-03-09 10:39:40,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 11:39:45] 2026-03-09 10:39:40,090 | INFO     | [monitor] control thread has ended
[2026-03-09 11:39:45] 2026-03-09 10:39:44,780 | INFO     | all workflow threads have been joined
[2026-03-09 11:39:45] 2026-03-09 10:39:44,780 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 11:39:45] 2026-03-09 10:39:44,780 | INFO     | traces error code: 0
[2026-03-09 11:39:45] 2026-03-09 10:39:44,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 11:39:45] 2026-03-09 10:39:44,998 [wrapper] ==== pilot stdout END ====
[2026-03-09 11:39:45] 2026-03-09 10:39:45,000 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 11:39:45] 2026-03-09 10:39:45,003 [wrapper] pilotpid: 3490906
[2026-03-09 11:39:45] 2026-03-09 10:39:45,006 [wrapper] Pilot exit status: 0
[2026-03-09 11:39:45] 2026-03-09 10:39:45,022 [wrapper] pandaids: 7046722764
[2026-03-09 11:39:45] 2026-03-09 10:39:45,150 [wrapper] cleanup supervisor_pilot   75904 3490907
[2026-03-09 11:39:45] 2026-03-09 10:39:45,153 [wrapper] Test setup, not cleaning
[2026-03-09 11:39:45] 2026-03-09 10:39:45,155 [wrapper] apfmon messages muted
[2026-03-09 11:39:45] 2026-03-09 10:39:45,157 [wrapper] ==== wrapper stdout END ====
[2026-03-09 11:39:45] 2026-03-09 10:39:45,160 [wrapper] ==== wrapper stderr END ====
[2026-03-09 11:39:45]  *** Error codes and diagnostics ***
[2026-03-09 11:39:45]     "exeErrorCode": 0,
[2026-03-09 11:39:45]     "exeErrorDiag": "",
[2026-03-09 11:39:45]     "pilotErrorCode": 0,
[2026-03-09 11:39:45]     "pilotErrorDiag": "",
[2026-03-09 11:39:45]  *** Listing of results directory ***
[2026-03-09 11:39:45] total 431172
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc    584627 Mar  9 03:02 pilot3.tar.gz
[2026-03-09 11:39:45] -rwx------. 1 boinc boinc     36322 Mar  9 03:05 runpilot2-wrapper.sh
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc      5111 Mar  9 03:06 queuedata.json
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc       100 Mar  9 10:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 11:39:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 10:17 run_atlas
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc       105 Mar  9 10:17 job.xml
[2026-03-09 11:39:45] -rw-r--r--. 2 boinc boinc 258094073 Mar  9 10:17 EVNT.48958649._000072.pool.root.1
[2026-03-09 11:39:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 10:17 start_atlas.sh
[2026-03-09 11:39:45] drwxrwx--x. 2 boinc boinc      4096 Mar  9 10:17 shared
[2026-03-09 11:39:45] -rw-r--r--. 2 boinc boinc    597983 Mar  9 10:17 input.tar.gz
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc      6707 Mar  9 10:17 init_data.xml
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc         0 Mar  9 10:17 boinc_lockfile
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc      2620 Mar  9 10:17 pandaJob.out
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc    987066 Mar  9 10:18 agis_schedconf.cvmfs.json
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc   1511578 Mar  9 10:18 agis_ddmendpoints.agis.ALL.json
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc       445 Mar  9 10:18 workernode_map.json
[2026-03-09 11:39:45] drwx------. 5 boinc boinc      4096 Mar  9 10:18 pilot3
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc 177581052 Mar  9 11:38 HITS.48958651._001862.pool.root.1
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc       530 Mar  9 11:38 boinc_task_state.xml
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc      1030 Mar  9 11:38 memory_monitor_summary.json
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc    256698 Mar  9 11:38 log.48958651._001862.job.log.tgz.1
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc      6356 Mar  9 11:38 heartbeat.json
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc        27 Mar  9 11:39 wrapper_checkpoint.txt
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc      8192 Mar  9 11:39 boinc_mmap_file
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc        95 Mar  9 11:39 pilot_heartbeat.json
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc      4902 Mar  9 11:39 pilotlog.txt
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc    704696 Mar  9 11:39 log.48958651._001862.job.log.1
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc       357 Mar  9 11:39 output.list
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc       620 Mar  9 11:39 runtime_log
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc    983040 Mar  9 11:39 result.tar.gz
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc       663 Mar  9 11:39 xeKNDmKBfJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmb1aLDmTdpLIo.diag
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc      9221 Mar  9 11:39 runtime_log.err
[2026-03-09 11:39:45] -rw-r--r--. 1 boinc boinc     21524 Mar  9 11:39 stderr.txt
[2026-03-09 11:39:45] HITS file was successfully produced:
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc 177581052 Mar  9 11:38 shared/HITS.pool.root.1
[2026-03-09 11:39:45]  *** Contents of shared directory: ***
[2026-03-09 11:39:45] total 427036
[2026-03-09 11:39:45] -rw-r--r--. 2 boinc boinc 258094073 Mar  9 10:17 ATLAS.root_0
[2026-03-09 11:39:45] -rw-r--r--. 2 boinc boinc     15845 Mar  9 10:17 start_atlas.sh
[2026-03-09 11:39:45] -rw-r--r--. 2 boinc boinc    597983 Mar  9 10:17 input.tar.gz
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc 177581052 Mar  9 11:38 HITS.pool.root.1
[2026-03-09 11:39:45] -rw-------. 1 boinc boinc    983040 Mar  9 11:39 result.tar.gz
11:39:46 (3485808): run_atlas exited; CPU time 18443.482906
11:39:46 (3485808): called boinc_finish(0)

</stderr_txt>
]]>

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