Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:10 (21986): wrapper (7.7.26015): starting
12:29:10 (21986): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 12:29:10] Arguments: --nthreads 8
[2026-03-09 12:29:10] Threads: 8
[2026-03-09 12:29:10] Checking for CVMFS
[2026-03-09 12:29:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 12:29:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 12:29:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 12:29:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 12:29:16] 2.11.2.0 6904 120317 127976 157075 0 53 14004151 25165824 96 130560 164 41692854 99.829 29822285 1025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-09 12:29:16] CVMFS is ok
[2026-03-09 12:29:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 12:29:16] Checking for apptainer binary...
[2026-03-09 12:29:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 12:29:16] Running /usr/bin/apptainer --version
[2026-03-09 12:29:16] apptainer version 1.3.2-1.el7
[2026-03-09 12:29:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 12:29:28] cg-vwn474.simple-grid.lan
[2026-03-09 12:29:28] apptainer works
[2026-03-09 12:29:28] Set ATHENA_PROC_NUMBER=8
[2026-03-09 12:29:28] Set ATHENA_CORE_NUMBER=8
[2026-03-09 12:29:29] Starting ATLAS job with PandaID=7033880290
[2026-03-09 12:29:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 17:50:05]  *** The last 200 lines of the pilot log: ***
[2026-03-09 17:50:05] 2026-03-09 16:49:28,626 | INFO     | job 7033880290 has finished - writing final server update
[2026-03-09 17:50:05] 2026-03-09 16:49:28,626 | INFO     | total number of processed events: 400 (read)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,628 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7033880290/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,629 | INFO     | extracted standard info from prmon json
[2026-03-09 17:50:05] 2026-03-09 16:49:28,629 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 17:50:05] 2026-03-09 16:49:28,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 17:50:05] 2026-03-09 16:49:28,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 17:50:05] 2026-03-09 16:49:28,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 17:50:05] 2026-03-09 16:49:28,635 | INFO     | fitting pss+swap vs Time
[2026-03-09 17:50:05] 2026-03-09 16:49:28,635 | INFO     | sum of square deviations: 8625843592.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,638 | INFO     | sum of deviations: 86297063925.99995
[2026-03-09 17:50:05] 2026-03-09 16:49:28,638 | INFO     | mean x: 1773065697.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,639 | INFO     | mean y: 2476846.98349835
[2026-03-09 17:50:05] 2026-03-09 16:49:28,639 | INFO     | intersect: -17736120215.09579
[2026-03-09 17:50:05] 2026-03-09 16:49:28,639 | INFO     | chi2: 8.500707642379941
[2026-03-09 17:50:05] 2026-03-09 16:49:28,640 | INFO     | sum of square deviations: 8205826414.5
[2026-03-09 17:50:05] 2026-03-09 16:49:28,642 | INFO     | sum of deviations: 105317837943.50009
[2026-03-09 17:50:05] 2026-03-09 16:49:28,643 | INFO     | mean x: 1773065544.5
[2026-03-09 17:50:05] 2026-03-09 16:49:28,643 | INFO     | mean y: 2483654.7818791945
[2026-03-09 17:50:05] 2026-03-09 16:49:28,647 | INFO     | intersect: -22753960394.398388
[2026-03-09 17:50:05] 2026-03-09 16:49:28,648 | INFO     | chi2: 7.789808380941068
[2026-03-09 17:50:05] 2026-03-09 16:49:28,648 | INFO     | current chi2=7.789808380941068 (change=8.362824500571147 %)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,648 | INFO     | right removable region: 297
[2026-03-09 17:50:05] 2026-03-09 16:49:28,648 | INFO     | sum of square deviations: 8205826414.5
[2026-03-09 17:50:05] 2026-03-09 16:49:28,651 | INFO     | sum of deviations: -21101910254.999985
[2026-03-09 17:50:05] 2026-03-09 16:49:28,651 | INFO     | mean x: 1773065849.5
[2026-03-09 17:50:05] 2026-03-09 16:49:28,651 | INFO     | mean y: 2515821.1275167787
[2026-03-09 17:50:05] 2026-03-09 16:49:28,651 | INFO     | intersect: 4562090267.674482
[2026-03-09 17:50:05] 2026-03-09 16:49:28,652 | INFO     | chi2: 3.5232498105365355
[2026-03-09 17:50:05] 2026-03-09 16:49:28,652 | INFO     | current chi2=3.5232498105365355 (change=58.55345273878715 %)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,653 | INFO     | sum of square deviations: 7799669962.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,655 | INFO     | sum of deviations: -95162696322.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,656 | INFO     | mean x: 1773066002.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,656 | INFO     | mean y: 2543566.631399317
[2026-03-09 17:50:05] 2026-03-09 16:49:28,656 | INFO     | intersect: 21635477053.46355
[2026-03-09 17:50:05] 2026-03-09 16:49:28,656 | INFO     | chi2: 1.1307709371907757
[2026-03-09 17:50:05] 2026-03-09 16:49:28,656 | INFO     | current chi2=1.1307709371907757 (change=67.90545666648097 %)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,657 | INFO     | sum of square deviations: 7407141672.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,659 | INFO     | sum of deviations: -105315415389.50003
[2026-03-09 17:50:05] 2026-03-09 16:49:28,660 | INFO     | mean x: 1773066154.5
[2026-03-09 17:50:05] 2026-03-09 16:49:28,660 | INFO     | mean y: 2547491.3854166665
[2026-03-09 17:50:05] 2026-03-09 16:49:28,660 | INFO     | intersect: 25212163675.736286
[2026-03-09 17:50:05] 2026-03-09 16:49:28,660 | INFO     | chi2: 1.0395006763853911
[2026-03-09 17:50:05] 2026-03-09 16:49:28,660 | INFO     | current chi2=1.0395006763853911 (change=8.071507482508467 %)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,661 | INFO     | left removable region: 30
[2026-03-09 17:50:05] 2026-03-09 16:49:28,661 | INFO     | sum of square deviations: 5902093918.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,663 | INFO     | sum of deviations: -58962496421.99999
[2026-03-09 17:50:05] 2026-03-09 16:49:28,664 | INFO     | mean x: 1773066429.0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,664 | INFO     | mean y: 2545194.6441947566
[2026-03-09 17:50:05] 2026-03-09 16:49:28,664 | INFO     | intersect: 17715652513.5645
[2026-03-09 17:50:05] 2026-03-09 16:49:28,664 | INFO     | chi2: 0.22098388215503298
[2026-03-09 17:50:05] 2026-03-09 16:49:28,664 | INFO     | current memory leak: -9.99 B/s (using 267 data points, chi2=0.22)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,665 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,665 | INFO     | ..............................
[2026-03-09 17:50:05] 2026-03-09 16:49:28,665 | INFO     | . Timing measurements:
[2026-03-09 17:50:05] 2026-03-09 16:49:28,665 | INFO     | . get job = 0 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,666 | INFO     | . initial setup = 130 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,666 | INFO     | . payload setup = 165 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,666 | INFO     | . stage-in = 0 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,666 | INFO     | . payload execution = 18595 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,666 | INFO     | . stage-out = 4 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,666 | INFO     | . log creation = 1 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,666 | INFO     | ..............................
[2026-03-09 17:50:05] 2026-03-09 16:49:28,793 | INFO     | 
[2026-03-09 17:50:05] 2026-03-09 16:49:28,793 | INFO     | job summary report
[2026-03-09 17:50:05] 2026-03-09 16:49:28,793 | INFO     | --------------------------------------------------
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | PanDA job id: 7033880290
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | task id: 48844396
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | errors: (none)
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | pilot state: finished 
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | transexitcode: 0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | exeerrorcode: 0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | exeerrordiag: 
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | exitcode: 0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | exitmsg: OK
[2026-03-09 17:50:05] 2026-03-09 16:49:28,794 | INFO     | cpuconsumptiontime: 70430 s
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | nevents: 400
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | neventsw: 0
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | pid: 30386
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | pgrp: 30386
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | corecount: 8
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | event service: False
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | sizes: {0: 2279235, 1: 2280293, 2: 2280381, 12: 2280381, 18766: 2312928, 18771: 2321926, 18773: 2322110, 18775: 2322304}
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | --------------------------------------------------
[2026-03-09 17:50:05] 2026-03-09 16:49:28,795 | INFO     | 
[2026-03-09 17:50:05] 2026-03-09 16:49:28,796 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-09 17:50:05] 2026-03-09 16:49:29,398 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,399 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,399 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,399 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,401 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 17:50:05] 2026-03-09 16:49:29,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,401 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 17:50:05] 2026-03-09 16:49:29,401 | INFO     | job 7033880290 has completed (purged errors)
[2026-03-09 17:50:05] 2026-03-09 16:49:29,401 | INFO     | overall cleanup function is called
[2026-03-09 17:50:05] 2026-03-09 16:49:30,410 | INFO     | --- collectZombieJob: --- 10, [30386]
[2026-03-09 17:50:05] 2026-03-09 16:49:30,410 | INFO     | zombie collector waiting for pid 30386
[2026-03-09 17:50:05] 2026-03-09 16:49:30,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 17:50:05] 2026-03-09 16:49:30,411 | INFO     | collected zombie processes
[2026-03-09 17:50:05] 2026-03-09 16:49:30,411 | INFO     | will attempt to kill all subprocesses of pid=30386
[2026-03-09 17:50:05] 2026-03-09 16:49:30,487 | INFO     | process IDs to be killed: [30386] (in reverse order)
[2026-03-09 17:50:05] 2026-03-09 16:49:31,445 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 17:50:05] 2026-03-09 16:49:31,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 17:50:05] 2026-03-09 16:49:31,448 | INFO     | did not find any defunct processes belonging to 30386
[2026-03-09 17:50:05] 2026-03-09 16:49:31,449 | INFO     | did not find any defunct processes belonging to 30386
[2026-03-09 17:50:05] 2026-03-09 16:49:31,450 | INFO     | ready for new job
[2026-03-09 17:50:05] 2026-03-09 16:49:31,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 17:50:05] 2026-03-09 16:49:31,452 | INFO     | **************************************
[2026-03-09 17:50:05] 2026-03-09 16:49:31,452 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 17:50:05] 2026-03-09 16:49:31,452 | INFO     | **************************************
[2026-03-09 17:50:05] 2026-03-09 16:49:31,452 | INFO     | 
[2026-03-09 17:50:05] 2026-03-09 16:49:31,453 | INFO     | pilot is running in a VM
[2026-03-09 17:50:05] 2026-03-09 16:49:31,453 | INFO     | architecture information:
[2026-03-09 17:50:05] 2026-03-09 16:49:31,463 | INFO     | executing command: cat /etc/os-release
[2026-03-09 17:50:05] 2026-03-09 16:49:31,700 | INFO     | cat /etc/os-release:
[2026-03-09 17:50:05] NAME="CentOS Linux"
[2026-03-09 17:50:05] VERSION="7 (Core)"
[2026-03-09 17:50:05] ID="centos"
[2026-03-09 17:50:05] ID_LIKE="rhel fedora"
[2026-03-09 17:50:05] VERSION_ID="7"
[2026-03-09 17:50:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 17:50:05] ANSI_COLOR="0;31"
[2026-03-09 17:50:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 17:50:05] HOME_URL="https://www.centos.org/"
[2026-03-09 17:50:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 17:50:05] 
[2026-03-09 17:50:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 17:50:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 17:50:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 17:50:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 17:50:05] 
[2026-03-09 17:50:05] 2026-03-09 16:49:31,700 | INFO     | **************************************
[2026-03-09 17:50:05] 2026-03-09 16:49:32,204 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-09 17:50:05] 2026-03-09 16:49:32,510 | INFO     | sufficient remaining disk space (496296263680 B)
[2026-03-09 17:50:05] 2026-03-09 16:49:32,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 17:50:05] 2026-03-09 16:49:32,510 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 17:50:05] 2026-03-09 16:49:32,511 | INFO     | update_server=False
[2026-03-09 17:50:05] 2026-03-09 16:49:32,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 17:50:05] 2026-03-09 16:49:33,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 17:50:05] 2026-03-09 16:49:33,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 17:50:05] 2026-03-09 16:49:33,311 | INFO     | all data control threads have been joined
[2026-03-09 17:50:05] 2026-03-09 16:49:33,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:50:05] 2026-03-09 16:49:33,318 | INFO     | aborting loop
[2026-03-09 17:50:05] 2026-03-09 16:49:33,516 | INFO     | [job] retrieve thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:33,636 | INFO     | [payload] failed_post thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:33,640 | INFO     | all payload control threads have been joined
[2026-03-09 17:50:05] 2026-03-09 16:49:33,742 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:33,761 | INFO     | all job control threads have been joined
[2026-03-09 17:50:05] 2026-03-09 16:49:33,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:50:05] 2026-03-09 16:49:33,930 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,020 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,072 | INFO     | [data] copytool_in thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,238 | INFO     | [job] validate thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,317 | INFO     | [data] control thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,324 | INFO     | [job] job monitor thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,646 | INFO     | [payload] control thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,767 | INFO     | [job] control thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,815 | INFO     | [job] queue monitor thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:34,891 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:35,047 | INFO     | [payload] validate_post thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:35,149 | INFO     | [data] copytool_out thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:37,190 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 17:50:05] 2026-03-09 16:49:52,990 | INFO     | [monitor] cgroup control has ended
[2026-03-09 17:50:05] 2026-03-09 16:49:54,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314352744256)>', '<ExcThread(monitor, started 140313536481024)>']
[2026-03-09 17:50:05] 2026-03-09 16:49:59,334 | INFO     | all workflow threads have been joined
[2026-03-09 17:50:05] 2026-03-09 16:49:59,334 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 17:50:05] 2026-03-09 16:49:59,335 | INFO     | traces error code: 0
[2026-03-09 17:50:05] 2026-03-09 16:49:59,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 17:50:05] 2026-03-09 16:50:00,709 | INFO     | PID=25947 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-09 17:50:05] 2026-03-09 16:50:00,709 | INFO     | .. there are 2 such processes running
[2026-03-09 17:50:05] 2026-03-09 16:50:00,710 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 17:50:05] 2026-03-09 16:50:00,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 17:50:05] 2026-03-09 16:50:00,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 17:50:05] 2026-03-09 16:50:00,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 17:50:05] 2026-03-09 16:50:00,710 | CRITICAL | thread 'MainThread' is not alive
[2026-03-09 17:50:05] 2026-03-09 16:50:00,710 | INFO     | [monitor] control thread has ended
[2026-03-09 17:50:05] 2026-03-09 16:50:01,112 [wrapper] ==== pilot stdout END ====
[2026-03-09 17:50:05] 2026-03-09 16:50:01,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 17:50:05] 2026-03-09 16:50:01,351 [wrapper] pilotpid: 25947
[2026-03-09 17:50:05] 2026-03-09 16:50:01,406 [wrapper] Pilot exit status: 0
[2026-03-09 17:50:05] 2026-03-09 16:50:01,428 [wrapper] pandaids: 7033880290
[2026-03-09 17:50:05] 2026-03-09 16:50:01,576 [wrapper] cleanup supervisor_pilot  4751 25948
[2026-03-09 17:50:05] 2026-03-09 16:50:01,589 [wrapper] Test setup, not cleaning
[2026-03-09 17:50:05] 2026-03-09 16:50:01,678 [wrapper] apfmon messages muted
[2026-03-09 17:50:05] 2026-03-09 16:50:01,760 [wrapper] ==== wrapper stdout END ====
[2026-03-09 17:50:05] 2026-03-09 16:50:01,846 [wrapper] ==== wrapper stderr END ====
[2026-03-09 17:50:05]  *** Error codes and diagnostics ***
[2026-03-09 17:50:05]     "exeErrorCode": 0,
[2026-03-09 17:50:05]     "exeErrorDiag": "",
[2026-03-09 17:50:05]     "pilotErrorCode": 0,
[2026-03-09 17:50:05]     "pilotErrorDiag": "",
[2026-03-09 17:50:05]  *** Listing of results directory ***
[2026-03-09 17:50:05] total 417820
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc    584627 Feb 28 21:22 pilot3.tar.gz
[2026-03-09 17:50:05] -rwx------. 1 boinc boinc     36322 Feb 28 21:22 runpilot2-wrapper.sh
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc      5111 Feb 28 21:23 queuedata.json
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc       100 Mar  9 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 17:50:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 12:29 run_atlas
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc       105 Mar  9 12:29 job.xml
[2026-03-09 17:50:05] -rw-r--r--. 2 boinc boinc 235943803 Mar  9 12:29 EVNT.48453196._000002.pool.root.1
[2026-03-09 17:50:05] -rw-r--r--. 2 boinc boinc    597977 Mar  9 12:29 input.tar.gz
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc      6392 Mar  9 12:29 init_data.xml
[2026-03-09 17:50:05] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:29 start_atlas.sh
[2026-03-09 17:50:05] drwxrwx--x. 2 boinc boinc        68 Mar  9 12:29 shared
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc         0 Mar  9 12:29 boinc_lockfile
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc      2634 Mar  9 12:29 pandaJob.out
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc       415 Mar  9 12:36 workernode_map.json
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc    990710 Mar  9 12:36 agis_schedconf.cvmfs.json
[2026-03-09 17:50:05] drwx------. 5 boinc boinc      4096 Mar  9 12:36 pilot3
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc 181665960 Mar  9 17:47 HITS.48844396._000046.pool.root.1
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc       531 Mar  9 17:48 boinc_task_state.xml
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc      1012 Mar  9 17:49 memory_monitor_summary.json
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc   1511578 Mar  9 17:49 agis_ddmendpoints.agis.ALL.json
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc    535188 Mar  9 17:49 log.48844396._000046.job.log.tgz.1
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc      6303 Mar  9 17:49 heartbeat.json
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc      8192 Mar  9 17:49 boinc_mmap_file
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc        28 Mar  9 17:49 wrapper_checkpoint.txt
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc        95 Mar  9 17:50 pilot_heartbeat.json
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc       890 Mar  9 17:50 pilotlog.txt
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc   2631238 Mar  9 17:50 log.48844396._000046.job.log.1
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc       357 Mar  9 17:50 output.list
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc       620 Mar  9 17:50 runtime_log
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc   3184640 Mar  9 17:50 result.tar.gz
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc      8816 Mar  9 17:50 runtime_log.err
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc       655 Mar  9 17:50 dGvNDmg0fG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3z7KDmW6XSYo.diag
[2026-03-09 17:50:05] -rw-r--r--. 1 boinc boinc     20706 Mar  9 17:50 stderr.txt
[2026-03-09 17:50:05] HITS file was successfully produced:
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc 181665960 Mar  9 17:47 shared/HITS.pool.root.1
[2026-03-09 17:50:05]  *** Contents of shared directory: ***
[2026-03-09 17:50:05] total 411540
[2026-03-09 17:50:05] -rw-r--r--. 2 boinc boinc 235943803 Mar  9 12:29 ATLAS.root_0
[2026-03-09 17:50:05] -rw-r--r--. 2 boinc boinc    597977 Mar  9 12:29 input.tar.gz
[2026-03-09 17:50:05] -rw-r--r--. 2 boinc boinc     15845 Mar  9 12:29 start_atlas.sh
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc 181665960 Mar  9 17:47 HITS.pool.root.1
[2026-03-09 17:50:05] -rw-------. 1 boinc boinc   3184640 Mar  9 17:50 result.tar.gz
17:50:06 (21986): run_atlas exited; CPU time 70622.619495
17:50:06 (21986): called boinc_finish(0)

</stderr_txt>
]]>

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