Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:01 (2201896): wrapper (7.7.26015): starting
22:04:01 (2201896): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 22:04:01] Arguments: --nthreads 4
[2026-03-09 22:04:01] Threads: 4
[2026-03-09 22:04:01] Checking for CVMFS
[2026-03-09 22:04:01] No cvmfs_config command found, will try listing directly
[2026-03-09 22:04:01] CVMFS is ok
[2026-03-09 22:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 22:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 22:04:01] Further information can be found at the LHC@home message board.
[2026-03-09 22:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 22:04:01] Checking for apptainer binary...
[2026-03-09 22:04:01] which: no apptainer in ((null))
[2026-03-09 22:04:01] apptainer is not installed, using version from CVMFS
[2026-03-09 22:04:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 22:04:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-09 22:04:02] apptainer works
[2026-03-09 22:04:02] Set ATHENA_PROC_NUMBER=4
[2026-03-09 22:04:02] Set ATHENA_CORE_NUMBER=4
[2026-03-09 22:04:02] Starting ATLAS job with PandaID=7046355466
[2026-03-09 22:04:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 23:41:29]  *** The last 200 lines of the pilot log: ***
[2026-03-09 23:41:29]  filetype=log
[2026-03-09 23:41:29]  guid=3f856bb3-26d1-4eb8-a411-206abe15deca
[2026-03-09 23:41:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 23:41:29]  is_altstaged=None
[2026-03-09 23:41:29]  is_tar=False
[2026-03-09 23:41:29]  lfn=log.48966988._016349.job.log.tgz.1
[2026-03-09 23:41:29]  mtime=0
[2026-03-09 23:41:29]  protocol_id=None
[2026-03-09 23:41:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 23:41:29]  replicas=None
[2026-03-09 23:41:29]  scope=mc23_13p6TeV
[2026-03-09 23:41:29]  status=None
[2026-03-09 23:41:29]  status_code=0
[2026-03-09 23:41:29]  storage_token=
[2026-03-09 23:41:29]  surl=/var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7046355466/log.48966988._016349.job.log.tgz.1
[2026-03-09 23:41:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/ba/log.48966988._016349.job.log.tgz.1
[2026-03-09 23:41:29]  workdir=None
[2026-03-09 23:41:29] ]
[2026-03-09 23:41:29] 2026-03-09 22:40:46,610 | INFO     | transferring file log.48966988._016349.job.log.tgz.1 from /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7046355466/log.48966988._016349.job.log.tgz.1 to /var/lib/b
[2026-03-09 23:41:29] 2026-03-09 22:40:46,611 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7046355466/log.48966988._016349.job.log.tgz.1 /var/lib/boinc/var/slot80/slots/1/lo
[2026-03-09 23:41:29] 2026-03-09 22:40:46,626 | INFO     | adding to output.list: log.48966988._016349.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/ba/log.48966988._016349.job.log.tg
[2026-03-09 23:41:29] 2026-03-09 22:40:46,627 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 23:41:29] 2026-03-09 22:40:46,627 | INFO     | summary of transferred files:
[2026-03-09 23:41:29] 2026-03-09 22:40:46,627 | INFO     |  -- lfn=log.48966988._016349.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 23:41:29] 2026-03-09 22:40:46,627 | INFO     | stage-out finished correctly
[2026-03-09 23:41:29] 2026-03-09 22:40:47,391 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 23:41:29] 2026-03-09 22:40:47,439 | INFO     | time since job start (5793s) is within the limit (349056.0s)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,302 | INFO     | monitor loop #420: job 0:7046355466 is in state 'finished'
[2026-03-09 23:41:29] 2026-03-09 22:40:48,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,762 | INFO     | job 7046355466 has state=finished
[2026-03-09 23:41:29] 2026-03-09 22:40:48,762 | INFO     | preparing for final server update for job 7046355466 in state='finished'
[2026-03-09 23:41:29] 2026-03-09 22:40:48,762 | INFO     | reading metadata from: /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7046355466/jobReport.json
[2026-03-09 23:41:29] 2026-03-09 22:40:48,764 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/1/workernode_map.json
[2026-03-09 23:41:29] 2026-03-09 22:40:48,764 | INFO     | this job has now completed (state=finished)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,764 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,764 | INFO     | log transfer has been attempted: DONE
[2026-03-09 23:41:29] 2026-03-09 22:40:48,764 | INFO     | job 7046355466 has finished - writing final server update
[2026-03-09 23:41:29] 2026-03-09 22:40:48,765 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3659146/.job.ad'
[2026-03-09 23:41:29] 2026-03-09 22:40:48,765 | INFO     | total number of processed events: 400 (read)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,782 | INFO     | using path: /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7046355466/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,783 | INFO     | extracted standard info from prmon json
[2026-03-09 23:41:29] 2026-03-09 22:40:48,783 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 23:41:29] 2026-03-09 22:40:48,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 23:41:29] 2026-03-09 22:40:48,783 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 23:41:29] 2026-03-09 22:40:48,783 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 23:41:29] 2026-03-09 22:40:48,784 | INFO     | fitting pss+swap vs Time
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | sum of square deviations: 211285822.0
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | sum of deviations: 809506142.4999999
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | mean x: 1773093233.5
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | mean y: 2321465.147727273
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | intersect: -6790987476.061951
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | chi2: 0.00024090417613790104
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | current memory leak: 3.83 B/s (using 88 data points, chi2=0.00)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | could have reported an average CPU frequency of 3583 MHz (7 samples)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | ..............................
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | . Timing measurements:
[2026-03-09 23:41:29] 2026-03-09 22:40:48,785 | INFO     | . get job = 0 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,786 | INFO     | . initial setup = 5 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,786 | INFO     | . payload setup = 4 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,786 | INFO     | . stage-in = 0 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,786 | INFO     | . payload execution = 5772 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,786 | INFO     | . stage-out = 0 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,786 | INFO     | . log creation = 0 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,786 | INFO     | ..............................
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | 
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | job summary report
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | --------------------------------------------------
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | PanDA job id: 7046355466
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | task id: 48966988
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | errors: (none)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | pilot state: finished 
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | transexitcode: 0
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | exeerrorcode: 0
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | exeerrordiag: 
[2026-03-09 23:41:29] 2026-03-09 22:40:48,833 | INFO     | exitcode: 0
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | exitmsg: OK
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | cpuconsumptiontime: 22243 s
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | nevents: 400
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | neventsw: 0
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | pid: 2224544
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | pgrp: 2224544
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | corecount: 4
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | event service: False
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | sizes: {0: 2279906, 1: 2280310, 11: 2280310, 5780: 2307043, 5781: 2316063, 5782: 2316119, 5784: 2316441}
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | --------------------------------------------------
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | 
[2026-03-09 23:41:29] 2026-03-09 22:40:48,834 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/1
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,851 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,851 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 23:41:29] 2026-03-09 22:40:48,851 | INFO     | job 7046355466 has completed (purged errors)
[2026-03-09 23:41:29] 2026-03-09 22:40:48,851 | INFO     | overall cleanup function is called
[2026-03-09 23:41:29] 2026-03-09 22:40:49,858 | INFO     | --- collectZombieJob: --- 10, [2224544]
[2026-03-09 23:41:29] 2026-03-09 22:40:49,858 | INFO     | zombie collector waiting for pid 2224544
[2026-03-09 23:41:29] 2026-03-09 22:40:49,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 23:41:29] 2026-03-09 22:40:49,858 | INFO     | collected zombie processes
[2026-03-09 23:41:29] 2026-03-09 22:40:49,858 | INFO     | will attempt to kill all subprocesses of pid=2224544
[2026-03-09 23:41:29] 2026-03-09 22:40:50,288 | INFO     | process IDs to be killed: [2224544] (in reverse order)
[2026-03-09 23:41:29] 2026-03-09 22:40:50,501 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 23:41:29] 2026-03-09 22:40:50,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 23:41:29] 2026-03-09 22:40:50,527 | INFO     | did not find any defunct processes belonging to 2224544
[2026-03-09 23:41:29] 2026-03-09 22:40:50,548 | INFO     | did not find any defunct processes belonging to 2224544
[2026-03-09 23:41:29] 2026-03-09 22:40:50,549 | INFO     | ready for new job
[2026-03-09 23:41:29] 2026-03-09 22:40:50,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 23:41:29] 2026-03-09 22:40:50,550 | INFO     | **************************************
[2026-03-09 23:41:29] 2026-03-09 22:40:50,550 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 23:41:29] 2026-03-09 22:40:50,550 | INFO     | **************************************
[2026-03-09 23:41:29] 2026-03-09 22:40:50,550 | INFO     | 
[2026-03-09 23:41:29] 2026-03-09 22:40:50,556 | INFO     | architecture information:
[2026-03-09 23:41:29] 2026-03-09 22:40:50,556 | INFO     | executing command: cat /etc/os-release
[2026-03-09 23:41:29] 2026-03-09 22:40:50,571 | INFO     | cat /etc/os-release:
[2026-03-09 23:41:29] NAME="CentOS Linux"
[2026-03-09 23:41:29] VERSION="7 (Core)"
[2026-03-09 23:41:29] ID="centos"
[2026-03-09 23:41:29] ID_LIKE="rhel fedora"
[2026-03-09 23:41:29] VERSION_ID="7"
[2026-03-09 23:41:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 23:41:29] ANSI_COLOR="0;31"
[2026-03-09 23:41:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 23:41:29] HOME_URL="https://www.centos.org/"
[2026-03-09 23:41:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 23:41:29] 
[2026-03-09 23:41:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 23:41:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 23:41:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 23:41:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 23:41:29] 
[2026-03-09 23:41:29] 2026-03-09 22:40:50,572 | INFO     | **************************************
[2026-03-09 23:41:29] 2026-03-09 22:40:51,074 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/1
[2026-03-09 23:41:29] 2026-03-09 22:40:51,089 | INFO     | sufficient remaining disk space (21471690752 B)
[2026-03-09 23:41:29] 2026-03-09 22:40:51,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 23:41:29] 2026-03-09 22:40:51,089 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 23:41:29] 2026-03-09 22:40:51,089 | INFO     | update_server=False
[2026-03-09 23:41:29] 2026-03-09 22:40:51,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 23:41:29] 2026-03-09 22:40:51,631 | INFO     | all data control threads have been joined
[2026-03-09 23:41:29] 2026-03-09 22:40:51,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:41:29] 2026-03-09 22:40:51,809 | INFO     | aborting loop
[2026-03-09 23:41:29] 2026-03-09 22:40:52,094 | INFO     | [job] retrieve thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:52,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 23:41:29] 2026-03-09 22:40:52,355 | INFO     | all payload control threads have been joined
[2026-03-09 23:41:29] 2026-03-09 22:40:52,385 | INFO     | [job] validate thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:52,473 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:52,612 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:52,636 | INFO     | [data] control thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:52,656 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:52,745 | INFO     | all job control threads have been joined
[2026-03-09 23:41:29] 2026-03-09 22:40:52,814 | INFO     | [job] job monitor thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:52,844 | INFO     | [data] copytool_in thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:53,111 | INFO     | [payload] validate_post thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:53,308 | INFO     | [payload] failed_post thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:53,360 | INFO     | [payload] control thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:53,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 23:41:29] 2026-03-09 22:40:53,750 | INFO     | [job] control thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:53,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:41:29] 2026-03-09 22:40:54,190 | INFO     | [data] copytool_out thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:54,849 | INFO     | [job] queue monitor thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:40:57,456 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:41:01,335 | INFO     | job.realtimelogging is not enabled
[2026-03-09 23:41:29] 2026-03-09 22:41:02,340 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 23:41:29] 2026-03-09 22:41:21,100 | INFO     | PID=2210525 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 23:41:29] 2026-03-09 22:41:21,100 | INFO     | .. there are 60 such processes running
[2026-03-09 23:41:29] 2026-03-09 22:41:21,101 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 23:41:29] 2026-03-09 22:41:21,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 23:41:29] 2026-03-09 22:41:21,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 23:41:29] 2026-03-09 22:41:23,583 | INFO     | [monitor] cgroup control has ended
[2026-03-09 23:41:29] 2026-03-09 22:41:24,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22405463222080)>', '<ExcThread(monitor, started 22405149849344)>']
[2026-03-09 23:41:29] 2026-03-09 22:41:25,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 23:41:29] 2026-03-09 22:41:25,121 | INFO     | [monitor] control thread has ended
[2026-03-09 23:41:29] 2026-03-09 22:41:29,180 | INFO     | all workflow threads have been joined
[2026-03-09 23:41:29] 2026-03-09 22:41:29,180 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 23:41:29] 2026-03-09 22:41:29,180 | INFO     | traces error code: 0
[2026-03-09 23:41:29] 2026-03-09 22:41:29,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 23:41:29] 2026-03-09 22:41:29,323 [wrapper] ==== pilot stdout END ====
[2026-03-09 23:41:29] 2026-03-09 22:41:29,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 23:41:29] 2026-03-09 22:41:29,329 [wrapper] pilotpid: 2210525
[2026-03-09 23:41:29] 2026-03-09 22:41:29,335 [wrapper] Pilot exit status: 0
[2026-03-09 23:41:29] 2026-03-09 22:41:29,343 [wrapper] pandaids: 7046355466
[2026-03-09 23:41:29] 2026-03-09 22:41:29,453 [wrapper] cleanup supervisor_pilot 3275959 2210527
[2026-03-09 23:41:29] 2026-03-09 22:41:29,456 [wrapper] Test setup, not cleaning
[2026-03-09 23:41:29] 2026-03-09 22:41:29,457 [wrapper] apfmon messages muted
[2026-03-09 23:41:29] 2026-03-09 22:41:29,459 [wrapper] ==== wrapper stdout END ====
[2026-03-09 23:41:29] 2026-03-09 22:41:29,460 [wrapper] ==== wrapper stderr END ====
[2026-03-09 23:41:29]  *** Error codes and diagnostics ***
[2026-03-09 23:41:29]     "exeErrorCode": 0,
[2026-03-09 23:41:29]     "exeErrorDiag": "",
[2026-03-09 23:41:29]     "pilotErrorCode": 0,
[2026-03-09 23:41:29]     "pilotErrorDiag": "",
[2026-03-09 23:41:29]  *** Listing of results directory ***
[2026-03-09 23:41:29] total 403500
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc    584627 Mar  8 15:46 pilot3.tar.gz
[2026-03-09 23:41:29] -rwx------. 1 boinc boinc     36322 Mar  8 15:48 runpilot2-wrapper.sh
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc      5111 Mar  8 15:49 queuedata.json
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc       100 Mar  9 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 23:41:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 22:03 run_atlas
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc       105 Mar  9 22:03 job.xml
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc      6707 Mar  9 22:04 init_data.xml
[2026-03-09 23:41:29] -rw-r--r--. 2 boinc boinc 210778268 Mar  9 22:04 EVNT.48966985._000637.pool.root.1
[2026-03-09 23:41:29] -rw-r--r--. 2 boinc boinc     15845 Mar  9 22:04 start_atlas.sh
[2026-03-09 23:41:29] drwxrwx--x. 2 boinc boinc      4096 Mar  9 22:04 shared
[2026-03-09 23:41:29] -rw-r--r--. 2 boinc boinc    597970 Mar  9 22:04 input.tar.gz
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc         0 Mar  9 22:04 boinc_lockfile
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc      2592 Mar  9 22:04 pandaJob.out
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc   1002738 Mar  9 22:04 agis_schedconf.cvmfs.json
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc   1511578 Mar  9 22:04 agis_ddmendpoints.agis.ALL.json
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc       444 Mar  9 22:04 workernode_map.json
[2026-03-09 23:41:29] drwx------. 5 boinc boinc      4096 Mar  9 22:04 pilot3
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc 196229083 Mar  9 23:40 HITS.48966988._016349.pool.root.1
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc       529 Mar  9 23:40 boinc_task_state.xml
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc      1033 Mar  9 23:40 memory_monitor_summary.json
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc    280363 Mar  9 23:40 log.48966988._016349.job.log.tgz.1
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc      6356 Mar  9 23:40 heartbeat.json
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc        95 Mar  9 23:41 pilot_heartbeat.json
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc      8192 Mar  9 23:41 boinc_mmap_file
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc        27 Mar  9 23:41 wrapper_checkpoint.txt
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc      4901 Mar  9 23:41 pilotlog.txt
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc    840001 Mar  9 23:41 log.48966988._016349.job.log.1
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc       357 Mar  9 23:41 output.list
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc       620 Mar  9 23:41 runtime_log
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc   1136640 Mar  9 23:41 result.tar.gz
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc      9204 Mar  9 23:41 runtime_log.err
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc       663 Mar  9 23:41 BePODm3bUJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmO2WLDmlmGOKm.diag
[2026-03-09 23:41:29] -rw-r--r--. 1 boinc boinc     21159 Mar  9 23:41 stderr.txt
[2026-03-09 23:41:29] HITS file was successfully produced:
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc 196229083 Mar  9 23:40 shared/HITS.pool.root.1
[2026-03-09 23:41:29]  *** Contents of shared directory: ***
[2026-03-09 23:41:29] total 399192
[2026-03-09 23:41:29] -rw-r--r--. 2 boinc boinc 210778268 Mar  9 22:04 ATLAS.root_0
[2026-03-09 23:41:29] -rw-r--r--. 2 boinc boinc     15845 Mar  9 22:04 start_atlas.sh
[2026-03-09 23:41:29] -rw-r--r--. 2 boinc boinc    597970 Mar  9 22:04 input.tar.gz
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc 196229083 Mar  9 23:40 HITS.pool.root.1
[2026-03-09 23:41:29] -rw-------. 1 boinc boinc   1136640 Mar  9 23:41 result.tar.gz
23:41:30 (2201896): run_atlas exited; CPU time 22476.456127
23:41:30 (2201896): called boinc_finish(0)

</stderr_txt>
]]>

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