Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:30 (1223466): wrapper (7.7.26015): starting
00:03:30 (1223466): wrapper: running run_atlas (--nthreads 11)
[2026-03-09 00:03:30] Arguments: --nthreads 11
[2026-03-09 00:03:30] Threads: 11
[2026-03-09 00:03:30] Checking for CVMFS
[2026-03-09 00:03:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 00:03:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 00:03:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 00:03:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 00:03:33] 2.13.3.0 9601 117134 365512 157063 2 515 23863231 32935936 21681 16776704 0 165872527 99.502 255850638 40821 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 00:03:33] CVMFS is ok
[2026-03-09 00:03:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 00:03:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 00:03:33] Further information can be found at the LHC@home message board.
[2026-03-09 00:03:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 00:03:33] Checking for apptainer binary...
[2026-03-09 00:03:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 00:03:33] Running /usr/bin/apptainer --version
[2026-03-09 00:03:33] apptainer version 1.4.5-2.el9
[2026-03-09 00:03:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 00:03:34] c6-5-7-2.aglt2.org
[2026-03-09 00:03:34] apptainer works
[2026-03-09 00:03:34] Set ATHENA_PROC_NUMBER=11
[2026-03-09 00:03:34] Set ATHENA_CORE_NUMBER=11
[2026-03-09 00:03:34] Starting ATLAS job with PandaID=7046661995
[2026-03-09 00:03:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 09:13:16]  *** The last 200 lines of the pilot log: ***
[2026-03-09 09:13:16] 2026-03-09 13:11:46,299 | INFO     | log transfer has been attempted: DONE
[2026-03-09 09:13:16] 2026-03-09 13:11:46,308 | INFO     | job 7046661995 has finished - writing final server update
[2026-03-09 09:13:16] 2026-03-09 13:11:46,309 | INFO     | total number of processed events: 400 (read)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,447 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7046661995/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,448 | INFO     | extracted standard info from prmon json
[2026-03-09 09:13:16] 2026-03-09 13:11:46,448 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 09:13:16] 2026-03-09 13:11:46,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 09:13:16] 2026-03-09 13:11:46,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 09:13:16] 2026-03-09 13:11:46,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 09:13:16] 2026-03-09 13:11:46,455 | INFO     | fitting pss+swap vs Time
[2026-03-09 09:13:16] 2026-03-09 13:11:46,456 | INFO     | sum of square deviations: 47748760733.25306
[2026-03-09 09:13:16] 2026-03-09 13:11:46,461 | INFO     | sum of deviations: 339865253775.88074
[2026-03-09 09:13:16] 2026-03-09 13:11:46,462 | INFO     | mean x: 1773045559.4626865
[2026-03-09 09:13:16] 2026-03-09 13:11:46,462 | INFO     | mean y: 2593663.069029851
[2026-03-09 09:13:16] 2026-03-09 13:11:46,462 | INFO     | intersect: -12617557515.081354
[2026-03-09 09:13:16] 2026-03-09 13:11:46,462 | INFO     | chi2: 5.121483723880663
[2026-03-09 09:13:16] 2026-03-09 13:11:46,463 | INFO     | sum of square deviations: 46425060728.57626
[2026-03-09 09:13:16] 2026-03-09 13:11:46,468 | INFO     | sum of deviations: 371933857687.09576
[2026-03-09 09:13:16] 2026-03-09 13:11:46,468 | INFO     | mean x: 1773045406.9717515
[2026-03-09 09:13:16] 2026-03-09 13:11:46,469 | INFO     | mean y: 2597325.9397363467
[2026-03-09 09:13:16] 2026-03-09 13:11:46,469 | INFO     | intersect: -14202136232.189398
[2026-03-09 09:13:16] 2026-03-09 13:11:46,469 | INFO     | chi2: 4.418256626778192
[2026-03-09 09:13:16] 2026-03-09 13:11:46,469 | INFO     | current chi2=4.418256626778192 (change=13.730925157946611 %)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,469 | INFO     | right removable region: 530
[2026-03-09 09:13:16] 2026-03-09 13:11:46,470 | INFO     | sum of square deviations: 46424745968.57626
[2026-03-09 09:13:16] 2026-03-09 13:11:46,475 | INFO     | sum of deviations: 168783146817.76822
[2026-03-09 09:13:16] 2026-03-09 13:11:46,476 | INFO     | mean x: 1773045711.9717515
[2026-03-09 09:13:16] 2026-03-09 13:11:46,476 | INFO     | mean y: 2613351.8512241053
[2026-03-09 09:13:16] 2026-03-09 13:11:46,476 | INFO     | intersect: -6443522829.936484
[2026-03-09 09:13:16] 2026-03-09 13:11:46,476 | INFO     | chi2: 1.692782573277368
[2026-03-09 09:13:16] 2026-03-09 13:11:46,477 | INFO     | current chi2=1.692782573277368 (change=66.94741866728596 %)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,477 | INFO     | sum of square deviations: 45125526395.17872
[2026-03-09 09:13:16] 2026-03-09 13:11:46,482 | INFO     | sum of deviations: 97852316883.9162
[2026-03-09 09:13:16] 2026-03-09 13:11:46,482 | INFO     | mean x: 1773045864.475285
[2026-03-09 09:13:16] 2026-03-09 13:11:46,483 | INFO     | mean y: 2621667.224334601
[2026-03-09 09:13:16] 2026-03-09 13:11:46,483 | INFO     | intersect: -3842134497.1910543
[2026-03-09 09:13:16] 2026-03-09 13:11:46,483 | INFO     | chi2: 1.1129558791365568
[2026-03-09 09:13:16] 2026-03-09 13:11:46,483 | INFO     | current chi2=1.1129558791365568 (change=34.25287472201574 %)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,484 | INFO     | sum of square deviations: 43850708588.84434
[2026-03-09 09:13:16] 2026-03-09 13:11:46,508 | INFO     | sum of deviations: 51922225965.53353
[2026-03-09 09:13:16] 2026-03-09 13:11:46,509 | INFO     | mean x: 1773046016.9827256
[2026-03-09 09:13:16] 2026-03-09 13:11:46,509 | INFO     | mean y: 2627157.9481765833
[2026-03-09 09:13:16] 2026-03-09 13:11:46,509 | INFO     | intersect: -2096780101.4475486
[2026-03-09 09:13:16] 2026-03-09 13:11:46,510 | INFO     | chi2: 0.8856784530566896
[2026-03-09 09:13:16] 2026-03-09 13:11:46,510 | INFO     | current chi2=0.8856784530566896 (change=20.421063434804935 %)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,510 | INFO     | left removable region: 30
[2026-03-09 09:13:16] 2026-03-09 13:11:46,510 | INFO     | sum of square deviations: 38758816100.92778
[2026-03-09 09:13:16] 2026-03-09 13:11:46,600 | INFO     | sum of deviations: 35336868666.12799
[2026-03-09 09:13:16] 2026-03-09 13:11:46,601 | INFO     | mean x: 1773046291.512
[2026-03-09 09:13:16] 2026-03-09 13:11:46,601 | INFO     | mean y: 2637498.062
[2026-03-09 09:13:16] 2026-03-09 13:11:46,601 | INFO     | intersect: -1613869667.1458936
[2026-03-09 09:13:16] 2026-03-09 13:11:46,601 | INFO     | chi2: 0.005791700037026975
[2026-03-09 09:13:16] 2026-03-09 13:11:46,602 | INFO     | current memory leak: 0.91 B/s (using 500 data points, chi2=0.01)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,602 | INFO     | could have reported an average CPU frequency of 3032 MHz (22 samples)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | ..............................
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . Timing measurements:
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . get job = 0 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . initial setup = 42 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . payload setup = 57 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . stage-in = 0 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . payload execution = 32694 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . stage-out = 4 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | . log creation = 0 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,603 | INFO     | ..............................
[2026-03-09 09:13:16] 2026-03-09 13:11:46,702 | INFO     | 
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | job summary report
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | --------------------------------------------------
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | PanDA job id: 7046661995
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | task id: 48966988
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | errors: (none)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | pilot state: finished 
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | transexitcode: 0
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | exeerrorcode: 0
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | exeerrordiag: 
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | exitcode: 0
[2026-03-09 09:13:16] 2026-03-09 13:11:46,703 | INFO     | exitmsg: OK
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | cpuconsumptiontime: 45522 s
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | nevents: 400
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | neventsw: 0
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | pid: 1241598
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | pgrp: 1241598
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | corecount: 11
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | event service: False
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | sizes: {0: 2279782, 1: 2280299, 2: 2280327, 32756: 2319099, 32761: 2328097, 32763: 2328475}
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | --------------------------------------------------
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | 
[2026-03-09 09:13:16] 2026-03-09 13:11:46,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 09:13:16] 2026-03-09 13:11:46,869 | INFO     | job 7046661995 has completed (purged errors)
[2026-03-09 09:13:16] 2026-03-09 13:11:46,870 | INFO     | overall cleanup function is called
[2026-03-09 09:13:16] 2026-03-09 13:11:47,879 | INFO     | --- collectZombieJob: --- 10, [1241598]
[2026-03-09 09:13:16] 2026-03-09 13:11:47,880 | INFO     | zombie collector waiting for pid 1241598
[2026-03-09 09:13:16] 2026-03-09 13:11:47,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 09:13:16] 2026-03-09 13:11:47,880 | INFO     | collected zombie processes
[2026-03-09 09:13:16] 2026-03-09 13:11:47,880 | INFO     | will attempt to kill all subprocesses of pid=1241598
[2026-03-09 09:13:16] 2026-03-09 13:11:48,569 | INFO     | process IDs to be killed: [1241598] (in reverse order)
[2026-03-09 09:13:16] 2026-03-09 13:11:48,685 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 09:13:16] 2026-03-09 13:11:48,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 09:13:16] 2026-03-09 13:11:48,785 | INFO     | did not find any defunct processes belonging to 1241598
[2026-03-09 09:13:16] 2026-03-09 13:11:48,827 | INFO     | did not find any defunct processes belonging to 1241598
[2026-03-09 09:13:16] 2026-03-09 13:11:48,832 | INFO     | ready for new job
[2026-03-09 09:13:16] 2026-03-09 13:11:48,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 09:13:16] 2026-03-09 13:11:48,849 | INFO     | **************************************
[2026-03-09 09:13:16] 2026-03-09 13:11:48,849 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 09:13:16] 2026-03-09 13:11:48,849 | INFO     | **************************************
[2026-03-09 09:13:16] 2026-03-09 13:11:48,849 | INFO     | 
[2026-03-09 09:13:16] 2026-03-09 13:11:48,856 | INFO     | architecture information:
[2026-03-09 09:13:16] 2026-03-09 13:11:48,859 | INFO     | executing command: cat /etc/os-release
[2026-03-09 09:13:16] 2026-03-09 13:11:48,876 | INFO     | cat /etc/os-release:
[2026-03-09 09:13:16] NAME="CentOS Linux"
[2026-03-09 09:13:16] VERSION="7 (Core)"
[2026-03-09 09:13:16] ID="centos"
[2026-03-09 09:13:16] ID_LIKE="rhel fedora"
[2026-03-09 09:13:16] VERSION_ID="7"
[2026-03-09 09:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 09:13:16] ANSI_COLOR="0;31"
[2026-03-09 09:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 09:13:16] HOME_URL="https://www.centos.org/"
[2026-03-09 09:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 09:13:16] 
[2026-03-09 09:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 09:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 09:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 09:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 09:13:16] 
[2026-03-09 09:13:16] 2026-03-09 13:11:48,876 | INFO     | **************************************
[2026-03-09 09:13:16] 2026-03-09 13:11:49,390 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-09 09:13:16] 2026-03-09 13:11:49,469 | INFO     | sufficient remaining disk space (75056021504 B)
[2026-03-09 09:13:16] 2026-03-09 13:11:49,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 09:13:16] 2026-03-09 13:11:49,469 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 09:13:16] 2026-03-09 13:11:49,469 | INFO     | update_server=False
[2026-03-09 09:13:16] 2026-03-09 13:11:49,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 09:13:16] 2026-03-09 13:11:49,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:13:16] 2026-03-09 13:11:49,470 | INFO     | aborting loop
[2026-03-09 09:13:16] 2026-03-09 13:11:49,555 | INFO     | all payload control threads have been joined
[2026-03-09 09:13:16] 2026-03-09 13:11:49,791 | INFO     | all data control threads have been joined
[2026-03-09 09:13:16] 2026-03-09 13:11:50,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 09:13:16] 2026-03-09 13:11:50,476 | INFO     | [job] retrieve thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,476 | INFO     | [job] job monitor thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,578 | INFO     | [payload] control thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,580 | INFO     | [payload] failed_post thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,724 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,736 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,772 | INFO     | [data] copytool_in thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,797 | INFO     | [data] control thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:50,876 | INFO     | all job control threads have been joined
[2026-03-09 09:13:16] 2026-03-09 13:11:50,977 | INFO     | [payload] validate_post thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:51,187 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:51,282 | INFO     | [job] validate thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:51,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:13:16] 2026-03-09 13:11:51,777 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:51,882 | INFO     | [job] control thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:52,179 | INFO     | [data] copytool_out thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:52,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 09:13:16] 2026-03-09 13:11:52,723 | INFO     | [job] queue monitor thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:11:56,327 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 09:13:16] 2026-03-09 13:12:17,039 | INFO     | 32807s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-09 09:13:16] 2026-03-09 13:12:18,602 | INFO     | PID=1231106 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 09:13:16] 2026-03-09 13:12:18,602 | INFO     | .. there are 23 such processes running
[2026-03-09 09:13:16] 2026-03-09 13:12:18,602 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 09:13:16] 2026-03-09 13:12:18,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 09:13:16] 2026-03-09 13:12:18,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 09:13:16] 2026-03-09 13:12:39,270 | INFO     | [monitor] cgroup control has ended
[2026-03-09 09:13:16] 2026-03-09 13:12:39,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862443992896)>', '<ExcThread(monitor, started 139861893826304)>']
[2026-03-09 09:13:16] 2026-03-09 13:12:40,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 09:13:16] 2026-03-09 13:12:40,751 | INFO     | [monitor] control thread has ended
[2026-03-09 09:13:16] 2026-03-09 13:12:44,790 | INFO     | all workflow threads have been joined
[2026-03-09 09:13:16] 2026-03-09 13:12:44,791 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 09:13:16] 2026-03-09 13:12:44,791 | INFO     | traces error code: 0
[2026-03-09 09:13:16] 2026-03-09 13:12:44,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 09:13:16] 2026-03-09 13:12:44,991 [wrapper] ==== pilot stdout END ====
[2026-03-09 09:13:16] 2026-03-09 13:12:45,019 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 09:13:16] 2026-03-09 13:12:45,037 [wrapper] pilotpid: 1231106
[2026-03-09 09:13:16] 2026-03-09 13:12:45,064 [wrapper] Pilot exit status: 0
[2026-03-09 09:13:16] 2026-03-09 13:12:45,102 [wrapper] pandaids: 7046661995
[2026-03-09 09:13:16] 2026-03-09 13:12:45,172 [wrapper] cleanup supervisor_pilot 2588025 1231107
[2026-03-09 09:13:16] 2026-03-09 13:12:45,175 [wrapper] Test setup, not cleaning
[2026-03-09 09:13:16] 2026-03-09 13:12:45,177 [wrapper] apfmon messages muted
[2026-03-09 09:13:16] 2026-03-09 13:12:45,189 [wrapper] ==== wrapper stdout END ====
[2026-03-09 09:13:16] 2026-03-09 13:12:45,213 [wrapper] ==== wrapper stderr END ====
[2026-03-09 09:13:16]  *** Error codes and diagnostics ***
[2026-03-09 09:13:16]     "exeErrorCode": 0,
[2026-03-09 09:13:16]     "exeErrorDiag": "",
[2026-03-09 09:13:16]     "pilotErrorCode": 0,
[2026-03-09 09:13:16]     "pilotErrorDiag": "",
[2026-03-09 09:13:16]  *** Listing of results directory ***
[2026-03-09 09:13:16] total 415432
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas    584627 Mar  8 19:43 pilot3.tar.gz
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas      5111 Mar  8 19:44 queuedata.json
[2026-03-09 09:13:16] -rwx------. 1 boincer umatlas     36322 Mar  8 19:44 runpilot2-wrapper.sh
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas       100 Mar  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 09:13:16] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 00:03 run_atlas
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas       105 Mar  9 00:03 job.xml
[2026-03-09 09:13:16] -rw-r--r--. 2 boincer umatlas 212978183 Mar  9 00:03 EVNT.48966985._000822.pool.root.1
[2026-03-09 09:13:16] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 00:03 start_atlas.sh
[2026-03-09 09:13:16] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 00:03 shared
[2026-03-09 09:13:16] -rw-r--r--. 2 boincer umatlas    597966 Mar  9 00:03 input.tar.gz
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas         0 Mar  9 00:03 boinc_lockfile
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas      2592 Mar  9 00:03 pandaJob.out
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas        57 Mar  9 00:03 setup.sh.local
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas    999108 Mar  9 00:05 agis_schedconf.cvmfs.json
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas       441 Mar  9 00:05 workernode_map.json
[2026-03-09 09:13:16] drwx------. 5 boincer umatlas      4096 Mar  9 00:05 pilot3
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas       530 Mar  9 09:10 boinc_task_state.xml
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas 199010702 Mar  9 09:10 HITS.48966988._021022.pool.root.1
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas        95 Mar  9 09:11 pilot_heartbeat.json
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas      1040 Mar  9 09:11 memory_monitor_summary.json
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas   1511578 Mar  9 09:11 agis_ddmendpoints.agis.ALL.json
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas    737956 Mar  9 09:11 log.48966988._021022.job.log.tgz.1
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas      6399 Mar  9 09:11 heartbeat.json
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas      6841 Mar  9 09:11 init_data.xml
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas      4936 Mar  9 09:12 pilotlog.txt
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas   4001289 Mar  9 09:12 log.48966988._021022.job.log.1
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas       357 Mar  9 09:12 output.list
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas       620 Mar  9 09:12 runtime_log
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas   4761600 Mar  9 09:12 result.tar.gz
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas       656 Mar  9 09:12 Q0vKDm0ycJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLlaLDmxWCyDn.diag
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas      9344 Mar  9 09:12 runtime_log.err
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 09:13 boinc_mmap_file
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas        26 Mar  9 09:13 wrapper_checkpoint.txt
[2026-03-09 09:13:16] -rw-r--r--. 1 boincer umatlas     21130 Mar  9 09:13 stderr.txt
[2026-03-09 09:13:16] HITS file was successfully produced:
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas 199010702 Mar  9 09:10 shared/HITS.pool.root.1
[2026-03-09 09:13:16]  *** Contents of shared directory: ***
[2026-03-09 09:13:16] total 407592
[2026-03-09 09:13:16] -rw-r--r--. 2 boincer umatlas 212978183 Mar  9 00:03 ATLAS.root_0
[2026-03-09 09:13:16] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 00:03 start_atlas.sh
[2026-03-09 09:13:16] -rw-r--r--. 2 boincer umatlas    597966 Mar  9 00:03 input.tar.gz
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas 199010702 Mar  9 09:10 HITS.pool.root.1
[2026-03-09 09:13:16] -rw-------. 1 boincer umatlas   4761600 Mar  9 09:12 result.tar.gz
09:13:18 (1223466): run_atlas exited; CPU time 46678.204807
09:13:18 (1223466): called boinc_finish(0)

</stderr_txt>
]]>

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