Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:54:56 (1112022): wrapper (7.7.26015): starting
12:54:56 (1112022): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 12:54:56] Arguments: --nthreads 4
[2026-03-15 12:54:56] Threads: 4
[2026-03-15 12:54:56] Checking for CVMFS
[2026-03-15 12:54:56] No cvmfs_config command found, will try listing directly
[2026-03-15 12:54:56] CVMFS is ok
[2026-03-15 12:54:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 12:54:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 12:54:56] Further information can be found at the LHC@home message board.
[2026-03-15 12:54:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 12:54:56] Checking for apptainer binary...
[2026-03-15 12:54:56] which: no apptainer in ((null))
[2026-03-15 12:54:56] apptainer is not installed, using version from CVMFS
[2026-03-15 12:54:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 12:54:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-03-15 12:54:56] apptainer works
[2026-03-15 12:54:56] Set ATHENA_PROC_NUMBER=4
[2026-03-15 12:54:56] Set ATHENA_CORE_NUMBER=4
[2026-03-15 12:54:56] Starting ATLAS job with PandaID=7033637753
[2026-03-15 12:54:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 16:09:44]  *** The last 200 lines of the pilot log: ***
[2026-03-15 16:09:44] 2026-03-15 15:08:50,058 | INFO     | log transfer has been attempted: DONE
[2026-03-15 16:09:44] 2026-03-15 15:08:50,058 | INFO     | job 7033637753 has finished - writing final server update
[2026-03-15 16:09:44] 2026-03-15 15:08:50,058 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_404663/.job.ad'
[2026-03-15 16:09:44] 2026-03-15 15:08:50,059 | INFO     | total number of processed events: 400 (read)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,083 | INFO     | using path: /var/lib/boinc/var/slot80/slots/0/PanDA_Pilot-7033637753/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,083 | INFO     | extracted standard info from prmon json
[2026-03-15 16:09:44] 2026-03-15 15:08:50,083 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 16:09:44] 2026-03-15 15:08:50,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 16:09:44] 2026-03-15 15:08:50,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 16:09:44] 2026-03-15 15:08:50,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 16:09:44] 2026-03-15 15:08:50,088 | INFO     | fitting pss+swap vs Time
[2026-03-15 16:09:44] 2026-03-15 15:08:50,088 | INFO     | sum of square deviations: 2126802667.5
[2026-03-15 16:09:44] 2026-03-15 15:08:50,089 | INFO     | sum of deviations: 27488703767.999996
[2026-03-15 16:09:44] 2026-03-15 15:08:50,089 | INFO     | mean x: 1773581511.5
[2026-03-15 16:09:44] 2026-03-15 15:08:50,089 | INFO     | mean y: 2332839.6842105263
[2026-03-15 16:09:44] 2026-03-15 15:08:50,089 | INFO     | intersect: -22921024142.62274
[2026-03-15 16:09:44] 2026-03-15 15:08:50,090 | INFO     | chi2: 1.3526596476556656
[2026-03-15 16:09:44] 2026-03-15 15:08:50,090 | INFO     | sum of square deviations: 1963274020.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,091 | INFO     | sum of deviations: 26663218035.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,091 | INFO     | mean x: 1773581359.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,091 | INFO     | mean y: 2332069.8216216215
[2026-03-15 16:09:44] 2026-03-15 15:08:50,091 | INFO     | intersect: -24084670557.467567
[2026-03-15 16:09:44] 2026-03-15 15:08:50,092 | INFO     | chi2: 1.3533338203763259
[2026-03-15 16:09:44] 2026-03-15 15:08:50,092 | INFO     | current chi2=1.3533338203763259 (change=-0.04984052875597426 %)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,092 | INFO     | right removable region: 184
[2026-03-15 16:09:44] 2026-03-15 15:08:50,092 | INFO     | sum of square deviations: 1963274020.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,093 | INFO     | sum of deviations: 2807865380.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,093 | INFO     | mean x: 1773581664.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,094 | INFO     | mean y: 2355538.8864864865
[2026-03-15 16:09:44] 2026-03-15 15:08:50,094 | INFO     | intersect: -2534212715.0694194
[2026-03-15 16:09:44] 2026-03-15 15:08:50,094 | INFO     | chi2: 0.001879422395529397
[2026-03-15 16:09:44] 2026-03-15 15:08:50,094 | INFO     | current chi2=0.001879422395529397 (change=99.86105725865433 %)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,094 | INFO     | sum of square deviations: 1808350185.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,095 | INFO     | sum of deviations: 2139942098.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,096 | INFO     | mean x: 1773581816.5
[2026-03-15 16:09:44] 2026-03-15 15:08:50,096 | INFO     | mean y: 2356199.388888889
[2026-03-15 16:09:44] 2026-03-15 15:08:50,096 | INFO     | intersect: -2096442155.5191574
[2026-03-15 16:09:44] 2026-03-15 15:08:50,096 | INFO     | chi2: 0.0014356222071124267
[2026-03-15 16:09:44] 2026-03-15 15:08:50,096 | INFO     | current chi2=0.0014356222071124267 (change=23.613647973581813 %)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,096 | INFO     | left removable region: 20
[2026-03-15 16:09:44] 2026-03-15 15:08:50,097 | INFO     | sum of square deviations: 1367709365.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,097 | INFO     | sum of deviations: 620591613.0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,098 | INFO     | mean x: 1773581938.5
[2026-03-15 16:09:44] 2026-03-15 15:08:50,098 | INFO     | mean y: 2357539.4146341463
[2026-03-15 16:09:44] 2026-03-15 15:08:50,098 | INFO     | intersect: -802396821.5393701
[2026-03-15 16:09:44] 2026-03-15 15:08:50,098 | INFO     | chi2: 4.526603225480602e-05
[2026-03-15 16:09:44] 2026-03-15 15:08:50,098 | INFO     | current memory leak: 0.45 B/s (using 164 data points, chi2=0.00)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,098 | INFO     | could have reported an average CPU frequency of 2689 MHz (10 samples)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | ..............................
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . Timing measurements:
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . get job = 0 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . initial setup = 8 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . payload setup = 9 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . stage-in = 0 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . payload execution = 11585 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . stage-out = 1 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | . log creation = 0 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,099 | INFO     | ..............................
[2026-03-15 16:09:44] 2026-03-15 15:08:50,192 | INFO     | 
[2026-03-15 16:09:44] 2026-03-15 15:08:50,192 | INFO     | job summary report
[2026-03-15 16:09:44] 2026-03-15 15:08:50,192 | INFO     | --------------------------------------------------
[2026-03-15 16:09:44] 2026-03-15 15:08:50,192 | INFO     | PanDA job id: 7033637753
[2026-03-15 16:09:44] 2026-03-15 15:08:50,192 | INFO     | task id: 48838581
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | errors: (none)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | pilot state: finished 
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | transexitcode: 0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | exeerrorcode: 0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | exeerrordiag: 
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | exitcode: 0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | exitmsg: OK
[2026-03-15 16:09:44] 2026-03-15 15:08:50,193 | INFO     | cpuconsumptiontime: 44425 s
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | nevents: 400
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | neventsw: 0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | pid: 1121967
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | pgrp: 1121967
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | corecount: 4
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | event service: False
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | sizes: {0: 2280270, 11: 2280270, 11598: 2310135, 11599: 2319349}
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | --------------------------------------------------
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | 
[2026-03-15 16:09:44] 2026-03-15 15:08:50,194 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/0
[2026-03-15 16:09:44] 2026-03-15 15:08:50,228 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | job 7033637753 has completed (purged errors)
[2026-03-15 16:09:44] 2026-03-15 15:08:50,230 | INFO     | overall cleanup function is called
[2026-03-15 16:09:44] 2026-03-15 15:08:51,239 | INFO     | --- collectZombieJob: --- 10, [1121967]
[2026-03-15 16:09:44] 2026-03-15 15:08:51,240 | INFO     | zombie collector waiting for pid 1121967
[2026-03-15 16:09:44] 2026-03-15 15:08:51,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 16:09:44] 2026-03-15 15:08:51,240 | INFO     | collected zombie processes
[2026-03-15 16:09:44] 2026-03-15 15:08:51,240 | INFO     | will attempt to kill all subprocesses of pid=1121967
[2026-03-15 16:09:44] 2026-03-15 15:08:51,417 | INFO     | PID=1116680 has CPU usage=17.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 16:09:44] 2026-03-15 15:08:51,417 | INFO     | .. there are 23 such processes running
[2026-03-15 16:09:44] 2026-03-15 15:08:52,459 | INFO     | process IDs to be killed: [1121967] (in reverse order)
[2026-03-15 16:09:44] 2026-03-15 15:08:52,811 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 16:09:44] 2026-03-15 15:08:52,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 16:09:44] 2026-03-15 15:08:52,903 | INFO     | did not find any defunct processes belonging to 1121967
[2026-03-15 16:09:44] 2026-03-15 15:08:52,979 | INFO     | did not find any defunct processes belonging to 1121967
[2026-03-15 16:09:44] 2026-03-15 15:08:52,980 | INFO     | ready for new job
[2026-03-15 16:09:44] 2026-03-15 15:08:52,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 16:09:44] 2026-03-15 15:08:52,983 | INFO     | **************************************
[2026-03-15 16:09:44] 2026-03-15 15:08:52,983 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 16:09:44] 2026-03-15 15:08:52,983 | INFO     | **************************************
[2026-03-15 16:09:44] 2026-03-15 15:08:52,983 | INFO     | 
[2026-03-15 16:09:44] 2026-03-15 15:08:52,995 | INFO     | architecture information:
[2026-03-15 16:09:44] 2026-03-15 15:08:52,995 | INFO     | executing command: cat /etc/os-release
[2026-03-15 16:09:44] 2026-03-15 15:08:53,025 | INFO     | cat /etc/os-release:
[2026-03-15 16:09:44] NAME="CentOS Linux"
[2026-03-15 16:09:44] VERSION="7 (Core)"
[2026-03-15 16:09:44] ID="centos"
[2026-03-15 16:09:44] ID_LIKE="rhel fedora"
[2026-03-15 16:09:44] VERSION_ID="7"
[2026-03-15 16:09:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 16:09:44] ANSI_COLOR="0;31"
[2026-03-15 16:09:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 16:09:44] HOME_URL="https://www.centos.org/"
[2026-03-15 16:09:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 16:09:44] 
[2026-03-15 16:09:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 16:09:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 16:09:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 16:09:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 16:09:44] 
[2026-03-15 16:09:44] 2026-03-15 15:08:53,025 | INFO     | **************************************
[2026-03-15 16:09:44] 2026-03-15 15:08:53,231 | WARNING  | process 1121967 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 16:09:44] 2026-03-15 15:08:53,528 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/0
[2026-03-15 16:09:44] 2026-03-15 15:08:53,562 | INFO     | sufficient remaining disk space (66544730112 B)
[2026-03-15 16:09:44] 2026-03-15 15:08:53,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 16:09:44] 2026-03-15 15:08:53,563 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 16:09:44] 2026-03-15 15:08:53,564 | INFO     | update_server=False
[2026-03-15 16:09:44] 2026-03-15 15:08:53,564 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 16:09:44] 2026-03-15 15:08:53,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 16:09:44] 2026-03-15 15:08:53,847 | INFO     | using path: /var/lib/boinc/var/slot80/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 16:09:44] 2026-03-15 15:08:54,537 | INFO     | all data control threads have been joined
[2026-03-15 16:09:44] 2026-03-15 15:08:54,569 | INFO     | [job] retrieve thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:54,590 | INFO     | [payload] validate_post thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:54,667 | INFO     | all payload control threads have been joined
[2026-03-15 16:09:44] 2026-03-15 15:08:54,680 | INFO     | number of running child processes to parent process 1121967: 1
[2026-03-15 16:09:44] 2026-03-15 15:08:54,680 | INFO     | maximum number of monitored processes: 6
[2026-03-15 16:09:44] 2026-03-15 15:08:54,680 | INFO     | aborting job monitoring since job object (job id=7033637753) has expired
[2026-03-15 16:09:44] 2026-03-15 15:08:54,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:09:44] 2026-03-15 15:08:54,680 | INFO     | will abort loop
[2026-03-15 16:09:44] 2026-03-15 15:08:54,749 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:54,780 | INFO     | all job control threads have been joined
[2026-03-15 16:09:44] 2026-03-15 15:08:54,853 | INFO     | [data] copytool_in thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:54,945 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:09:44] 2026-03-15 15:08:55,392 | INFO     | [job] validate thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,543 | INFO     | [data] control thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,570 | INFO     | [data] copytool_out thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,571 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,666 | INFO     | [payload] failed_post thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,673 | INFO     | [payload] control thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,685 | INFO     | [job] job monitor thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,732 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:55,785 | INFO     | [job] control thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:08:56,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 16:09:44] 2026-03-15 15:08:56,210 | INFO     | [job] queue monitor thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:09:00,064 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 16:09:44] 2026-03-15 15:09:24,492 | INFO     | PID=1116680 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 16:09:44] 2026-03-15 15:09:24,492 | INFO     | .. there are 23 such processes running
[2026-03-15 16:09:44] 2026-03-15 15:09:24,493 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 16:09:44] 2026-03-15 15:09:24,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 16:09:44] 2026-03-15 15:09:24,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 16:09:44] 2026-03-15 15:09:38,340 | INFO     | [monitor] cgroup control has ended
[2026-03-15 16:09:44] 2026-03-15 15:09:38,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22401998583616)>', '<ExcThread(monitor, started 22401758013184)>']
[2026-03-15 16:09:44] 2026-03-15 15:09:38,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 16:09:44] 2026-03-15 15:09:38,563 | INFO     | [monitor] control thread has ended
[2026-03-15 16:09:44] 2026-03-15 15:09:43,557 | INFO     | all workflow threads have been joined
[2026-03-15 16:09:44] 2026-03-15 15:09:43,557 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 16:09:44] 2026-03-15 15:09:43,558 | INFO     | traces error code: 0
[2026-03-15 16:09:44] 2026-03-15 15:09:43,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 16:09:44] 2026-03-15 15:09:43,741 [wrapper] ==== pilot stdout END ====
[2026-03-15 16:09:44] 2026-03-15 15:09:43,746 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 16:09:44] 2026-03-15 15:09:43,749 [wrapper] pilotpid: 1116680
[2026-03-15 16:09:44] 2026-03-15 15:09:43,754 [wrapper] Pilot exit status: 0
[2026-03-15 16:09:44] 2026-03-15 15:09:43,771 [wrapper] pandaids: 7033637753
[2026-03-15 16:09:44] 2026-03-15 15:09:43,972 [wrapper] cleanup supervisor_pilot 1570568 1116681
[2026-03-15 16:09:44] 2026-03-15 15:09:43,976 [wrapper] Test setup, not cleaning
[2026-03-15 16:09:44] 2026-03-15 15:09:43,980 [wrapper] apfmon messages muted
[2026-03-15 16:09:44] 2026-03-15 15:09:43,985 [wrapper] ==== wrapper stdout END ====
[2026-03-15 16:09:44] 2026-03-15 15:09:43,991 [wrapper] ==== wrapper stderr END ====
[2026-03-15 16:09:44]  *** Error codes and diagnostics ***
[2026-03-15 16:09:44]     "exeErrorCode": 0,
[2026-03-15 16:09:44]     "exeErrorDiag": "",
[2026-03-15 16:09:44]     "pilotErrorCode": 0,
[2026-03-15 16:09:44]     "pilotErrorDiag": "",
[2026-03-15 16:09:44]  *** Listing of results directory ***
[2026-03-15 16:09:44] total 498428
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc    584627 Feb 28 19:22 pilot3.tar.gz
[2026-03-15 16:09:44] -rwx------. 1 boinc boinc     36322 Feb 28 19:25 runpilot2-wrapper.sh
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc      5111 Feb 28 19:27 queuedata.json
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc       100 Mar 15 12:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 16:09:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 12:54 run_atlas
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc       105 Mar 15 12:54 job.xml
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc      6620 Mar 15 12:54 init_data.xml
[2026-03-15 16:09:44] -rw-r--r--. 2 boinc boinc 283228158 Mar 15 12:54 EVNT.48220205._000101.pool.root.1
[2026-03-15 16:09:44] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:54 start_atlas.sh
[2026-03-15 16:09:44] drwxrwx--x. 2 boinc boinc      4096 Mar 15 12:54 shared
[2026-03-15 16:09:44] -rw-r--r--. 2 boinc boinc    597974 Mar 15 12:54 input.tar.gz
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc         0 Mar 15 12:54 boinc_lockfile
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc      2587 Mar 15 12:54 pandaJob.out
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc   1006481 Mar 15 12:55 agis_schedconf.cvmfs.json
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc       443 Mar 15 12:55 workernode_map.json
[2026-03-15 16:09:44] drwx------. 5 boinc boinc      4096 Mar 15 12:55 pilot3
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc 219307227 Mar 15 16:08 HITS.48838581._002261.pool.root.1
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc       530 Mar 15 16:08 boinc_task_state.xml
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc      1024 Mar 15 16:08 memory_monitor_summary.json
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc   1511579 Mar 15 16:08 agis_ddmendpoints.agis.ALL.json
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc    353237 Mar 15 16:08 log.48838581._002261.job.log.tgz.1
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc      6358 Mar 15 16:08 heartbeat.json
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc        95 Mar 15 16:09 pilot_heartbeat.json
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc        28 Mar 15 16:09 wrapper_checkpoint.txt
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc      8192 Mar 15 16:09 boinc_mmap_file
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc      5362 Mar 15 16:09 pilotlog.txt
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc   1603641 Mar 15 16:09 log.48838581._002261.job.log.1
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc       357 Mar 15 16:09 output.list
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc       620 Mar 15 16:09 runtime_log
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc   1976320 Mar 15 16:09 result.tar.gz
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc      9205 Mar 15 16:09 runtime_log.err
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc       666 Mar 15 16:09 18XKDmXBeG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmt85KDmpNsGOo.diag
[2026-03-15 16:09:44] -rw-r--r--. 1 boinc boinc     21167 Mar 15 16:09 stderr.txt
[2026-03-15 16:09:44] HITS file was successfully produced:
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc 219307227 Mar 15 16:08 shared/HITS.pool.root.1
[2026-03-15 16:09:44]  *** Contents of shared directory: ***
[2026-03-15 16:09:44] total 493300
[2026-03-15 16:09:44] -rw-r--r--. 2 boinc boinc 283228158 Mar 15 12:54 ATLAS.root_0
[2026-03-15 16:09:44] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:54 start_atlas.sh
[2026-03-15 16:09:44] -rw-r--r--. 2 boinc boinc    597974 Mar 15 12:54 input.tar.gz
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc 219307227 Mar 15 16:08 HITS.pool.root.1
[2026-03-15 16:09:44] -rw-------. 1 boinc boinc   1976320 Mar 15 16:09 result.tar.gz
16:09:45 (1112022): run_atlas exited; CPU time 45127.392880
16:09:45 (1112022): called boinc_finish(0)

</stderr_txt>
]]>

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