Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:13:56 (3190111): wrapper (7.7.26015): starting
20:13:56 (3190111): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 20:13:56] Arguments: --nthreads 8
[2026-03-08 20:13:56] Threads: 8
[2026-03-08 20:13:56] Checking for CVMFS
[2026-03-08 20:13:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 20:13:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 20:13:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 20:13:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 20:13:58] 2.13.3.0 8759 105605 175952 157058 0 679 39768002 40960001 32904 16776704 0 888733252 99.689 699882299 43729 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 20:13:58] CVMFS is ok
[2026-03-08 20:13:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 20:13:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 20:13:58] Further information can be found at the LHC@home message board.
[2026-03-08 20:13:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 20:13:58] Checking for apptainer binary...
[2026-03-08 20:13:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 20:13:58] Running /usr/bin/apptainer --version
[2026-03-08 20:13:58] apptainer version 1.4.5-2.el9
[2026-03-08 20:13:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 20:13:59] c-208-39.aglt2.org
[2026-03-08 20:13:59] apptainer works
[2026-03-08 20:14:00] Set ATHENA_PROC_NUMBER=8
[2026-03-08 20:14:00] Set ATHENA_CORE_NUMBER=8
[2026-03-08 20:14:00] Starting ATLAS job with PandaID=7033638781
[2026-03-08 20:14:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 22:36:05]  *** The last 200 lines of the pilot log: ***
[2026-03-08 22:36:05] 2026-03-09 02:17:55,793 | INFO     | preparing for final server update for job 7033638781 in state='finished'
[2026-03-08 22:36:05] 2026-03-09 02:17:55,794 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7033638781/jobReport.json
[2026-03-08 22:36:05] 2026-03-09 02:17:55,796 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-08 22:36:05] 2026-03-09 02:17:55,797 | INFO     | this job has now completed (state=finished)
[2026-03-08 22:36:05] 2026-03-09 02:17:55,797 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 22:36:05] 2026-03-09 02:17:55,797 | INFO     | log transfer has been attempted: DONE
[2026-03-08 22:36:05] 2026-03-09 02:17:55,797 | INFO     | job 7033638781 has finished - writing final server update
[2026-03-08 22:36:05] 2026-03-09 02:17:55,797 | INFO     | total number of processed events: 400 (read)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,047 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7033638781/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,048 | INFO     | extracted standard info from prmon json
[2026-03-08 22:36:05] 2026-03-09 02:17:56,048 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 22:36:05] 2026-03-09 02:17:56,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 22:36:05] 2026-03-09 02:17:56,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 22:36:05] 2026-03-09 02:17:56,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 22:36:05] 2026-03-09 02:17:56,059 | INFO     | fitting pss+swap vs Time
[2026-03-08 22:36:05] 2026-03-09 02:17:56,059 | INFO     | sum of square deviations: 522528456.3529409
[2026-03-08 22:36:05] 2026-03-09 02:17:56,059 | INFO     | sum of deviations: 18921317414.764725
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | mean x: 1773019052.1176472
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | mean y: 2482772.4453781513
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | intersect: -64200444091.471565
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | chi2: 4.286095762523353
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | sum of square deviations: 459375121.4385968
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | sum of deviations: 25885267199.719296
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | mean x: 1773018899.5964913
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | mean y: 2498981.798245614
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | intersect: -99905105553.8603
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | chi2: 3.633710025221209
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | current chi2=3.633710025221209 (change=15.220979031930574 %)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | right removable region: 113
[2026-03-08 22:36:05] 2026-03-09 02:17:56,060 | INFO     | sum of square deviations: 459388118.78070146
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | sum of deviations: -15170302529.377192
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | mean x: 1773019204.622807
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | mean y: 2564751.99122807
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | intersect: 58552702696.16314
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | chi2: 0.9621747632086898
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | current chi2=0.9621747632086898 (change=77.55125371622054 %)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | sum of square deviations: 401557281.44954115
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | sum of deviations: -22217654796.3578
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | mean x: 1773019357.119266
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | mean y: 2583169.027522936
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | intersect: 98101494192.47522
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | chi2: 0.7477377621511534
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | current chi2=0.7477377621511534 (change=22.28669980310285 %)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,061 | INFO     | left removable region: 20
[2026-03-08 22:36:05] 2026-03-09 02:17:56,062 | INFO     | sum of square deviations: 249391800.92473125
[2026-03-08 22:36:05] 2026-03-09 02:17:56,062 | INFO     | sum of deviations: -11655826170.34409
[2026-03-08 22:36:05] 2026-03-09 02:17:56,062 | INFO     | mean x: 1773019479.1075268
[2026-03-08 22:36:05] 2026-03-09 02:17:56,062 | INFO     | mean y: 2598569.634408602
[2026-03-08 22:36:05] 2026-03-09 02:17:56,062 | INFO     | intersect: 82868221130.13129
[2026-03-08 22:36:05] 2026-03-09 02:17:56,062 | INFO     | chi2: 0.028034297987306715
[2026-03-08 22:36:05] 2026-03-09 02:17:56,062 | INFO     | current memory leak: -46.74 B/s (using 93 data points, chi2=0.03)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,064 | INFO     | could have reported an average CPU frequency of 3800 MHz (8 samples)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,064 | INFO     | ..............................
[2026-03-08 22:36:05] 2026-03-09 02:17:56,064 | INFO     | . Timing measurements:
[2026-03-08 22:36:05] 2026-03-09 02:17:56,064 | INFO     | . get job = 0 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,064 | INFO     | . initial setup = 38 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,065 | INFO     | . payload setup = 52 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,065 | INFO     | . stage-in = 0 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,065 | INFO     | . payload execution = 7244 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,065 | INFO     | . stage-out = 1 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,065 | INFO     | . log creation = 0 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,065 | INFO     | ..............................
[2026-03-08 22:36:05] 2026-03-09 02:17:56,281 | INFO     | 
[2026-03-08 22:36:05] 2026-03-09 02:17:56,282 | INFO     | job summary report
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | --------------------------------------------------
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | PanDA job id: 7033638781
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | task id: 48838581
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | errors: (none)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | pilot state: finished 
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | transexitcode: 0
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | exeerrorcode: 0
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | exeerrordiag: 
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | exitcode: 0
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | exitmsg: OK
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | cpuconsumptiontime: 27340 s
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | nevents: 400
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | neventsw: 0
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | pid: 3233230
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | pgrp: 3233230
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | corecount: 8
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | event service: False
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | sizes: {0: 2279171, 1: 2280289, 2: 2280289, 7300: 2307571, 7302: 2316569, 7303: 2316625, 7304: 2316947}
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | --------------------------------------------------
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | 
[2026-03-08 22:36:05] 2026-03-09 02:17:56,283 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 22:36:05] 2026-03-09 02:17:56,407 | INFO     | job 7033638781 has completed (purged errors)
[2026-03-08 22:36:05] 2026-03-09 02:17:56,407 | INFO     | overall cleanup function is called
[2026-03-08 22:36:05] 2026-03-09 02:17:57,434 | INFO     | --- collectZombieJob: --- 10, [3233230]
[2026-03-08 22:36:05] 2026-03-09 02:17:57,434 | INFO     | zombie collector waiting for pid 3233230
[2026-03-08 22:36:05] 2026-03-09 02:17:57,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 22:36:05] 2026-03-09 02:17:57,435 | INFO     | collected zombie processes
[2026-03-08 22:36:05] 2026-03-09 02:17:57,435 | INFO     | will attempt to kill all subprocesses of pid=3233230
[2026-03-08 22:36:05] 2026-03-09 02:17:57,717 | INFO     | PID=3205692 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-08 22:36:05] 2026-03-09 02:17:57,717 | INFO     | .. there are 31 such processes running
[2026-03-08 22:36:05] 2026-03-09 02:17:58,856 | INFO     | process IDs to be killed: [3233230] (in reverse order)
[2026-03-08 22:36:05] 2026-03-09 02:17:59,227 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 22:36:05] 2026-03-09 02:17:59,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 22:36:05] 2026-03-09 02:17:59,260 | INFO     | did not find any defunct processes belonging to 3233230
[2026-03-08 22:36:05] 2026-03-09 02:17:59,349 | INFO     | did not find any defunct processes belonging to 3233230
[2026-03-08 22:36:05] 2026-03-09 02:17:59,349 | INFO     | ready for new job
[2026-03-08 22:36:05] 2026-03-09 02:17:59,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 22:36:05] 2026-03-09 02:17:59,359 | INFO     | **************************************
[2026-03-08 22:36:05] 2026-03-09 02:17:59,359 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 22:36:05] 2026-03-09 02:17:59,359 | INFO     | **************************************
[2026-03-08 22:36:05] 2026-03-09 02:17:59,360 | INFO     | 
[2026-03-08 22:36:05] 2026-03-09 02:17:59,364 | INFO     | architecture information:
[2026-03-08 22:36:05] 2026-03-09 02:17:59,364 | INFO     | executing command: cat /etc/os-release
[2026-03-08 22:36:05] 2026-03-09 02:17:59,401 | INFO     | cat /etc/os-release:
[2026-03-08 22:36:05] NAME="CentOS Linux"
[2026-03-08 22:36:05] VERSION="7 (Core)"
[2026-03-08 22:36:05] ID="centos"
[2026-03-08 22:36:05] ID_LIKE="rhel fedora"
[2026-03-08 22:36:05] VERSION_ID="7"
[2026-03-08 22:36:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 22:36:05] ANSI_COLOR="0;31"
[2026-03-08 22:36:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 22:36:05] HOME_URL="https://www.centos.org/"
[2026-03-08 22:36:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 22:36:05] 
[2026-03-08 22:36:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 22:36:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 22:36:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 22:36:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 22:36:05] 
[2026-03-08 22:36:05] 2026-03-09 02:17:59,401 | INFO     | **************************************
[2026-03-08 22:36:05] 2026-03-09 02:17:59,904 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-08 22:36:05] 2026-03-09 02:17:59,996 | INFO     | sufficient remaining disk space (166519111680 B)
[2026-03-08 22:36:05] 2026-03-09 02:17:59,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 22:36:05] 2026-03-09 02:17:59,996 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 22:36:05] 2026-03-09 02:17:59,996 | INFO     | update_server=False
[2026-03-08 22:36:05] 2026-03-09 02:17:59,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 22:36:05] 2026-03-09 02:17:59,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 22:36:05] 2026-03-09 02:18:00,045 | INFO     | all data control threads have been joined
[2026-03-08 22:36:05] 2026-03-09 02:18:00,709 | INFO     | all job control threads have been joined
[2026-03-08 22:36:05] 2026-03-09 02:18:00,977 | INFO     | all payload control threads have been joined
[2026-03-08 22:36:05] 2026-03-09 02:18:00,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 22:36:05] 2026-03-09 02:18:00,986 | INFO     | aborting loop
[2026-03-08 22:36:05] 2026-03-09 02:18:01,002 | INFO     | [job] retrieve thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,050 | INFO     | [data] control thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,180 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 22:36:05] 2026-03-09 02:18:01,453 | INFO     | [job] validate thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,622 | INFO     | [payload] failed_post thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,644 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,715 | INFO     | [job] control thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 22:36:05] 2026-03-09 02:18:01,875 | INFO     | [payload] validate_post thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,983 | INFO     | [payload] control thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:01,991 | INFO     | [job] job monitor thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:02,004 | INFO     | [data] copytool_out thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:02,386 | INFO     | [job] queue monitor thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:02,435 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:02,485 | INFO     | [data] copytool_in thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:05,859 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:10,743 | INFO     | job.realtimelogging is not enabled
[2026-03-08 22:36:05] 2026-03-09 02:18:11,751 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 22:36:05] 2026-03-09 02:18:23,042 | INFO     | [monitor] cgroup control has ended
[2026-03-08 22:36:05] 2026-03-09 02:18:24,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140534588385088)>', '<ExcThread(monitor, started 140534240749312)>']
[2026-03-08 22:36:05] 2026-03-09 02:18:29,048 | INFO     | all workflow threads have been joined
[2026-03-08 22:36:05] 2026-03-09 02:18:29,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 22:36:05] 2026-03-09 02:18:29,049 | INFO     | traces error code: 0
[2026-03-08 22:36:05] 2026-03-09 02:18:29,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 22:36:05] 2026-03-09 02:18:31,682 | INFO     | PID=3205692 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 22:36:05] 2026-03-09 02:18:31,684 | INFO     | .. there are 31 such processes running
[2026-03-08 22:36:05] 2026-03-09 02:18:31,684 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 22:36:05] 2026-03-09 02:18:31,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 22:36:05] 2026-03-09 02:18:31,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 22:36:05] 2026-03-09 02:18:31,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 22:36:05] 2026-03-09 02:18:31,684 | INFO     | [monitor] control thread has ended
[2026-03-08 22:36:05] 2026-03-09 02:18:32,557 [wrapper] ==== pilot stdout END ====
[2026-03-08 22:36:05] 2026-03-09 02:18:32,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 22:36:05] 2026-03-09 02:18:32,641 [wrapper] pilotpid: 3205692
[2026-03-08 22:36:05] 2026-03-09 02:18:32,658 [wrapper] Pilot exit status: 0
[2026-03-08 22:36:05] 2026-03-09 02:18:32,747 [wrapper] pandaids: 7033638781
[2026-03-08 22:36:05] 2026-03-09 02:18:32,895 [wrapper] cleanup supervisor_pilot  489452 3205693
[2026-03-08 22:36:05] 2026-03-09 02:18:32,904 [wrapper] Test setup, not cleaning
[2026-03-08 22:36:05] 2026-03-09 02:18:32,908 [wrapper] apfmon messages muted
[2026-03-08 22:36:05] 2026-03-09 02:18:32,911 [wrapper] ==== wrapper stdout END ====
[2026-03-08 22:36:05] 2026-03-09 02:18:32,913 [wrapper] ==== wrapper stderr END ====
[2026-03-08 22:36:05]  *** Error codes and diagnostics ***
[2026-03-08 22:36:05]     "exeErrorCode": 0,
[2026-03-08 22:36:05]     "exeErrorDiag": "",
[2026-03-08 22:36:05]     "pilotErrorCode": 0,
[2026-03-08 22:36:05]     "pilotErrorDiag": "",
[2026-03-08 22:36:05]  *** Listing of results directory ***
[2026-03-08 22:36:05] total 503896
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 13:22 pilot3.tar.gz
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 13:23 queuedata.json
[2026-03-08 22:36:05] -rwx------. 1 boincer umatlas     36322 Feb 28 13:23 runpilot2-wrapper.sh
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas       100 Mar  8 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 22:36:05] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 20:13 run_atlas
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas       105 Mar  8 20:13 job.xml
[2026-03-08 22:36:05] -rw-r--r--. 2 boincer umatlas 289114071 Mar  8 20:13 EVNT.48220205._000113.pool.root.1
[2026-03-08 22:36:05] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 20:13 shared
[2026-03-08 22:36:05] -rw-r--r--. 2 boincer umatlas    597981 Mar  8 20:13 input.tar.gz
[2026-03-08 22:36:05] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 20:13 start_atlas.sh
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas         0 Mar  8 20:13 boinc_lockfile
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas      2588 Mar  8 20:14 pandaJob.out
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas        57 Mar  8 20:14 setup.sh.local
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas    999108 Mar  8 20:15 agis_schedconf.cvmfs.json
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas   1511578 Mar  8 20:15 agis_ddmendpoints.agis.ALL.json
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas       432 Mar  8 20:16 workernode_map.json
[2026-03-08 22:36:05] drwx------. 5 boincer umatlas      4096 Mar  8 20:16 pilot3
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas 220292967 Mar  8 22:16 HITS.48838581._002576.pool.root.1
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas       529 Mar  8 22:16 boinc_task_state.xml
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas        95 Mar  8 22:17 pilot_heartbeat.json
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas      1048 Mar  8 22:17 memory_monitor_summary.json
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas    370008 Mar  8 22:17 log.48838581._002576.job.log.tgz.1
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas      6364 Mar  8 22:17 heartbeat.json
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas       823 Mar  8 22:18 pilotlog.txt
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas    955590 Mar  8 22:18 log.48838581._002576.job.log.1
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas       357 Mar  8 22:18 output.list
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas       620 Mar  8 22:18 runtime_log
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas   1341440 Mar  8 22:18 result.tar.gz
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas       658 Mar  8 22:18 xxBODmp9dG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXl7KDmWisrym.diag
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas      9341 Mar  8 22:18 runtime_log.err
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas      7184 Mar  8 22:29 init_data.xml
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas        27 Mar  8 22:36 wrapper_checkpoint.txt
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 22:36 boinc_mmap_file
[2026-03-08 22:36:05] -rw-r--r--. 1 boincer umatlas     21406 Mar  8 22:36 stderr.txt
[2026-03-08 22:36:05] HITS file was successfully produced:
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas 220292967 Mar  8 22:16 shared/HITS.pool.root.1
[2026-03-08 22:36:05]  *** Contents of shared directory: ***
[2026-03-08 22:36:05] total 499392
[2026-03-08 22:36:05] -rw-r--r--. 2 boincer umatlas 289114071 Mar  8 20:13 ATLAS.root_0
[2026-03-08 22:36:05] -rw-r--r--. 2 boincer umatlas    597981 Mar  8 20:13 input.tar.gz
[2026-03-08 22:36:05] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 20:13 start_atlas.sh
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas 220292967 Mar  8 22:16 HITS.pool.root.1
[2026-03-08 22:36:05] -rw-------. 1 boincer umatlas   1341440 Mar  8 22:18 result.tar.gz
22:36:07 (3190111): run_atlas exited; CPU time 27606.301771
22:36:07 (3190111): called boinc_finish(0)

</stderr_txt>
]]>

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