Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:47:43 (1471038): wrapper (7.7.26015): starting
11:47:43 (1471038): wrapper: running run_atlas (--nthreads 3)
[2026-03-09 11:47:43] Arguments: --nthreads 3
[2026-03-09 11:47:43] Threads: 3
[2026-03-09 11:47:43] Checking for CVMFS
[2026-03-09 11:47:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 11:47:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 11:47:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 11:47:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 11:47:44] 2.9.2.0 12764 10106 86532 157073 1 50 28921372 36864001 0 130560 0 4094133 99.983 369887 11840 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-09 11:47:44] CVMFS is ok
[2026-03-09 11:47:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 11:47:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 11:47:44] Further information can be found at the LHC@home message board.
[2026-03-09 11:47:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 11:47:44] Checking for apptainer binary...
[2026-03-09 11:47:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 11:47:44] Running /usr/bin/apptainer --version
[2026-03-09 11:47:44] apptainer version 1.4.1-1.1
[2026-03-09 11:47:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 11:47:44] thA327
[2026-03-09 11:47:44] apptainer works
[2026-03-09 11:47:44] Set ATHENA_PROC_NUMBER=3
[2026-03-09 11:47:44] Set ATHENA_CORE_NUMBER=3
[2026-03-09 11:47:44] Starting ATLAS job with PandaID=7033636816
[2026-03-09 11:47:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 14:20:13]  *** The last 200 lines of the pilot log: ***
[2026-03-09 14:20:13] 2026-03-09 13:19:26,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 14:20:13] 2026-03-09 13:19:26,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:20:13] 2026-03-09 13:19:26,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 14:20:13] 2026-03-09 13:19:27,108 | INFO     | all job control threads have been joined
[2026-03-09 14:20:13] 2026-03-09 13:19:27,398 | INFO     | all data control threads have been joined
[2026-03-09 14:20:13] 2026-03-09 13:19:27,658 | INFO     | [job] retrieve thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:27,661 | INFO     | [job] queue monitor thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:27,769 | INFO     | [payload] validate_post thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:27,958 | INFO     | all payload control threads have been joined
[2026-03-09 14:20:13] 2026-03-09 13:19:28,114 | INFO     | [job] control thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,333 | INFO     | [job] validate thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,404 | INFO     | [data] control thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,482 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,482 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,486 | INFO     | [payload] failed_post thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,710 | INFO     | [data] copytool_in thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,724 | WARNING  | process 1479507 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 14:20:13] 2026-03-09 13:19:28,752 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 14:20:13] 2026-03-09 13:19:28,788 | INFO     | number of running child processes to parent process 1479507: 1
[2026-03-09 14:20:13] 2026-03-09 13:19:28,788 | INFO     | maximum number of monitored processes: 6
[2026-03-09 14:20:13] 2026-03-09 13:19:28,788 | INFO     | aborting job monitoring since job object (job id=7033636816) has expired
[2026-03-09 14:20:13] 2026-03-09 13:19:28,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:20:13] 2026-03-09 13:19:28,788 | INFO     | will abort loop
[2026-03-09 14:20:13] 2026-03-09 13:19:28,874 | INFO     | [data] copytool_out thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:28,964 | INFO     | [payload] control thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:29,048 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:29,793 | INFO     | [job] job monitor thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:29,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 14:20:13] 2026-03-09 13:19:33,958 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:19:37,359 | INFO     | job.realtimelogging is not enabled
[2026-03-09 14:20:13] 2026-03-09 13:19:38,364 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 14:20:13] 2026-03-09 13:20:07,237 | INFO     | [monitor] cgroup control has ended
[2026-03-09 14:20:13] 2026-03-09 13:20:08,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649951700800)>', '<ExcThread(monitor, started 139649150334720)>']
[2026-03-09 14:20:13] 2026-03-09 13:20:08,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 14:20:13] 2026-03-09 13:20:08,880 | INFO     | [monitor] control thread has ended
[2026-03-09 14:20:13] 2026-03-09 13:20:13,685 | INFO     | all workflow threads have been joined
[2026-03-09 14:20:13] 2026-03-09 13:20:13,685 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 14:20:13] 2026-03-09 13:20:13,685 | INFO     | traces error code: 0
[2026-03-09 14:20:13] 2026-03-09 13:20:13,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 14:20:13] 2026-03-09 13:20:13,736 [wrapper] ==== pilot stdout END ====
[2026-03-09 14:20:13] 2026-03-09 13:20:13,739 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 14:20:13] 2026-03-09 13:20:13,742 [wrapper] pilotpid: 1475078
[2026-03-09 14:20:13] 2026-03-09 13:20:13,744 [wrapper] Pilot exit status: 0
[2026-03-09 14:20:13] 2026-03-09 13:20:13,752 [wrapper] pandaids: 7033636816
[2026-03-09 14:20:13] 2026-03-09 13:20:13,769 [wrapper] cleanup supervisor_pilot 1485460 1475079
[2026-03-09 14:20:13] 2026-03-09 13:20:13,771 [wrapper] Test setup, not cleaning
[2026-03-09 14:20:13] 2026-03-09 13:20:13,774 [wrapper] apfmon messages muted
[2026-03-09 14:20:13] 2026-03-09 13:20:13,776 [wrapper] ==== wrapper stdout END ====
[2026-03-09 14:20:13] 2026-03-09 13:20:13,779 [wrapper] ==== wrapper stderr END ====
[2026-03-09 14:20:13]  *** Error codes and diagnostics ***
[2026-03-09 14:20:13]     "exeErrorCode": 0,
[2026-03-09 14:20:13]     "exeErrorDiag": "",
[2026-03-09 14:20:13]     "pilotErrorCode": 0,
[2026-03-09 14:20:13]     "pilotErrorDiag": "",
[2026-03-09 14:20:13]  *** Listing of results directory ***
[2026-03-09 14:20:13] total 410276
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc    584627 Feb 28 19:22 pilot3.tar.gz
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc      5111 Feb 28 19:23 queuedata.json
[2026-03-09 14:20:13] -rwx------ 1 boinc boinc     36322 Feb 28 19:24 runpilot2-wrapper.sh
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc       100 Mar  9 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 14:20:13] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 11:47 run_atlas
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc       105 Mar  9 11:47 job.xml
[2026-03-09 14:20:13] -rw-r--r-- 2 boinc boinc 219988058 Mar  9 11:47 EVNT.48452510._000002.pool.root.1
[2026-03-09 14:20:13] -rw-r--r-- 2 boinc boinc    597996 Mar  9 11:47 input.tar.gz
[2026-03-09 14:20:13] -rw-r--r-- 2 boinc boinc     15845 Mar  9 11:47 start_atlas.sh
[2026-03-09 14:20:13] drwxrwx--x 2 boinc boinc      4096 Mar  9 11:47 shared
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc         0 Mar  9 11:47 boinc_setup_complete
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc      6446 Mar  9 11:47 init_data.xml
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc         0 Mar  9 11:47 boinc_lockfile
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc      2691 Mar  9 11:47 pandaJob.out
[2026-03-09 14:20:13] -rw------- 1 boinc boinc    990726 Mar  9 11:47 agis_schedconf.cvmfs.json
[2026-03-09 14:20:13] -rw------- 1 boinc boinc   1511578 Mar  9 11:47 agis_ddmendpoints.agis.ALL.json
[2026-03-09 14:20:13] -rw------- 1 boinc boinc       422 Mar  9 11:47 workernode_map.json
[2026-03-09 14:20:13] drwx------ 5 boinc boinc      4096 Mar  9 11:47 pilot3
[2026-03-09 14:20:13] -rw------- 1 boinc boinc        95 Mar  9 14:18 pilot_heartbeat.json
[2026-03-09 14:20:13] -rw------- 1 boinc boinc 192985440 Mar  9 14:19 HITS.48844098._000047.pool.root.1
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc       529 Mar  9 14:19 boinc_task_state.xml
[2026-03-09 14:20:13] -rw------- 1 boinc boinc      1016 Mar  9 14:19 memory_monitor_summary.json
[2026-03-09 14:20:13] -rw------- 1 boinc boinc    325178 Mar  9 14:19 log.48844098._000047.job.log.tgz.1
[2026-03-09 14:20:13] -rw------- 1 boinc boinc      6282 Mar  9 14:19 heartbeat.json
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc        27 Mar  9 14:20 wrapper_checkpoint.txt
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc      8192 Mar  9 14:20 boinc_mmap_file
[2026-03-09 14:20:13] -rw------- 1 boinc boinc      5148 Mar  9 14:20 pilotlog.txt
[2026-03-09 14:20:13] -rw------- 1 boinc boinc   1297407 Mar  9 14:20 log.48844098._000047.job.log.1
[2026-03-09 14:20:13] -rw------- 1 boinc boinc       357 Mar  9 14:20 output.list
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc       620 Mar  9 14:20 runtime_log
[2026-03-09 14:20:13] -rw------- 1 boinc boinc   1638400 Mar  9 14:20 result.tar.gz
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc      8896 Mar  9 14:20 runtime_log.err
[2026-03-09 14:20:13] -rw------- 1 boinc boinc       657 Mar  9 14:20 ZVZNDm79dG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpp7KDm04nGXm.diag
[2026-03-09 14:20:13] -rw-r--r-- 1 boinc boinc      7482 Mar  9 14:20 stderr.txt
[2026-03-09 14:20:13] HITS file was successfully produced:
[2026-03-09 14:20:13] -rw------- 1 boinc boinc 192985440 Mar  9 14:19 shared/HITS.pool.root.1
[2026-03-09 14:20:13]  *** Contents of shared directory: ***
[2026-03-09 14:20:13] total 405508
[2026-03-09 14:20:13] -rw-r--r-- 2 boinc boinc 219988058 Mar  9 11:47 ATLAS.root_0
[2026-03-09 14:20:13] -rw-r--r-- 2 boinc boinc    597996 Mar  9 11:47 input.tar.gz
[2026-03-09 14:20:13] -rw-r--r-- 2 boinc boinc     15845 Mar  9 11:47 start_atlas.sh
[2026-03-09 14:20:13] -rw------- 1 boinc boinc 192985440 Mar  9 14:19 HITS.pool.root.1
[2026-03-09 14:20:13] -rw------- 1 boinc boinc   1638400 Mar  9 14:20 result.tar.gz
14:20:15 (1471038): run_atlas exited; CPU time 26602.864365
14:20:15 (1471038): called boinc_finish(0)

</stderr_txt>
]]>

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