Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:49 (524186): wrapper (7.7.26015): starting
18:49:49 (524186): wrapper: running run_atlas (--nthreads 9)
[2026-03-08 18:49:49] Arguments: --nthreads 9
[2026-03-08 18:49:49] Threads: 9
[2026-03-08 18:49:49] Checking for CVMFS
[2026-03-08 18:49:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 18:49:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 18:49:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 18:49:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 18:49:50] 2.13.3.0 11820 107017 241964 157055 2 672 28019674 40960000 27804 16776704 0 332197170 99.632 332362193 36622 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 18:49:50] CVMFS is ok
[2026-03-08 18:49:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 18:49:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 18:49:50] Further information can be found at the LHC@home message board.
[2026-03-08 18:49:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 18:49:50] Checking for apptainer binary...
[2026-03-08 18:49:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 18:49:50] Running /usr/bin/apptainer --version
[2026-03-08 18:49:50] apptainer version 1.4.5-2.el9
[2026-03-08 18:49:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 18:49:51] c-212-10.aglt2.org
[2026-03-08 18:49:51] apptainer works
[2026-03-08 18:49:51] Set ATHENA_PROC_NUMBER=9
[2026-03-08 18:49:51] Set ATHENA_CORE_NUMBER=9
[2026-03-08 18:49:51] Starting ATLAS job with PandaID=7046497818
[2026-03-08 18:49:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:00:07 (524186): BOINC client no longer exists - exiting
19:00:07 (524186): timer handler: client dead, exiting
19:12:20 (609173): wrapper (7.7.26015): starting
19:12:20 (609173): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 19:12:21] Arguments: --nthreads 8
[2026-03-08 19:12:21] Threads: 8
[2026-03-08 19:12:21] This job has been restarted, cleaning up previous attempt
[2026-03-08 19:12:21] Checking for CVMFS
[2026-03-08 19:12:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 19:12:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 19:12:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 19:12:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 19:12:21] 2.13.3.0 11820 107040 221792 157057 0 221 28126125 40960001 24585 16776704 0 332358653 99.632 332366648 36620 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 19:12:21] CVMFS is ok
[2026-03-08 19:12:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 19:12:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 19:12:21] Further information can be found at the LHC@home message board.
[2026-03-08 19:12:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 19:12:21] Checking for apptainer binary...
[2026-03-08 19:12:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 19:12:21] Running /usr/bin/apptainer --version
[2026-03-08 19:12:21] apptainer version 1.4.5-2.el9
[2026-03-08 19:12:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 19:12:22] c-212-10.aglt2.org
[2026-03-08 19:12:22] apptainer works
[2026-03-08 19:12:22] Set ATHENA_PROC_NUMBER=8
[2026-03-08 19:12:22] Set ATHENA_CORE_NUMBER=8
[2026-03-08 19:12:22] Starting ATLAS job with PandaID=7046497818
[2026-03-08 19:12:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 22:52:10]  *** The last 200 lines of the pilot log: ***
[2026-03-08 22:52:10] 2026-03-09 02:51:33,165 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,165 | INFO     | log transfer has been attempted: DONE
[2026-03-08 22:52:10] 2026-03-09 02:51:33,166 | INFO     | job 7046497818 has finished - writing final server update
[2026-03-08 22:52:10] 2026-03-09 02:51:33,173 | INFO     | total number of processed events: 400 (read)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,278 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7046497818/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,278 | INFO     | extracted standard info from prmon json
[2026-03-08 22:52:10] 2026-03-09 02:51:33,279 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 22:52:10] 2026-03-09 02:51:33,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 22:52:10] 2026-03-09 02:51:33,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 22:52:10] 2026-03-09 02:51:33,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 22:52:10] 2026-03-09 02:51:33,287 | INFO     | fitting pss+swap vs Time
[2026-03-08 22:52:10] 2026-03-09 02:51:33,288 | INFO     | sum of square deviations: 3081657049.981391
[2026-03-08 22:52:10] 2026-03-09 02:51:33,289 | INFO     | sum of deviations: 7056841915.879059
[2026-03-08 22:52:10] 2026-03-09 02:51:33,289 | INFO     | mean x: 1773018122.0093024
[2026-03-08 22:52:10] 2026-03-09 02:51:33,289 | INFO     | mean y: 2473149.060465116
[2026-03-08 22:52:10] 2026-03-09 02:51:33,291 | INFO     | intersect: -4057650478.6105537
[2026-03-08 22:52:10] 2026-03-09 02:51:33,292 | INFO     | chi2: 2.1891771604548627
[2026-03-08 22:52:10] 2026-03-09 02:51:33,292 | INFO     | sum of square deviations: 2871616512.480935
[2026-03-08 22:52:10] 2026-03-09 02:51:33,293 | INFO     | sum of deviations: 21061090800.84286
[2026-03-08 22:52:10] 2026-03-09 02:51:33,293 | INFO     | mean x: 1773017969.5095239
[2026-03-08 22:52:10] 2026-03-09 02:51:33,293 | INFO     | mean y: 2483120.3285714285
[2026-03-08 22:52:10] 2026-03-09 02:51:33,293 | INFO     | intersect: -13001235267.92681
[2026-03-08 22:52:10] 2026-03-09 02:51:33,294 | INFO     | chi2: 1.3983557195001017
[2026-03-08 22:52:10] 2026-03-09 02:51:33,294 | INFO     | current chi2=1.3983557195001017 (change=36.12414085255876 %)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,294 | INFO     | sum of square deviations: 2671343599.9804816
[2026-03-08 22:52:10] 2026-03-09 02:51:33,300 | INFO     | sum of deviations: 20416736918.25853
[2026-03-08 22:52:10] 2026-03-09 02:51:33,300 | INFO     | mean x: 1773017817.009756
[2026-03-08 22:52:10] 2026-03-09 02:51:33,300 | INFO     | mean y: 2482629.370731707
[2026-03-08 22:52:10] 2026-03-09 02:51:33,300 | INFO     | intersect: -13548465410.985338
[2026-03-08 22:52:10] 2026-03-09 02:51:33,301 | INFO     | chi2: 1.3991439783734945
[2026-03-08 22:52:10] 2026-03-09 02:51:33,301 | INFO     | current chi2=1.3991439783734945 (change=-0.056370411505487876 %)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,301 | INFO     | right removable region: 204
[2026-03-08 22:52:10] 2026-03-09 02:51:33,301 | INFO     | sum of square deviations: 2871615292.480935
[2026-03-08 22:52:10] 2026-03-09 02:51:33,302 | INFO     | sum of deviations: -23562221691.638092
[2026-03-08 22:52:10] 2026-03-09 02:51:33,302 | INFO     | mean x: 1773018274.5095239
[2026-03-08 22:52:10] 2026-03-09 02:51:33,302 | INFO     | mean y: 2495121.819047619
[2026-03-08 22:52:10] 2026-03-09 02:51:33,302 | INFO     | intersect: 14550491769.108944
[2026-03-08 22:52:10] 2026-03-09 02:51:33,303 | INFO     | chi2: 0.8209990497971246
[2026-03-08 22:52:10] 2026-03-09 02:51:33,303 | INFO     | current chi2=0.8209990497971246 (change=62.49736820630181 %)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,303 | INFO     | sum of square deviations: 2671341159.9804816
[2026-03-08 22:52:10] 2026-03-09 02:51:33,337 | INFO     | sum of deviations: -23491709602.84878
[2026-03-08 22:52:10] 2026-03-09 02:51:33,338 | INFO     | mean x: 1773018427.009756
[2026-03-08 22:52:10] 2026-03-09 02:51:33,338 | INFO     | mean y: 2495064.424390244
[2026-03-08 22:52:10] 2026-03-09 02:51:33,338 | INFO     | intersect: 15594376263.199188
[2026-03-08 22:52:10] 2026-03-09 02:51:33,338 | INFO     | chi2: 0.8204155740666748
[2026-03-08 22:52:10] 2026-03-09 02:51:33,338 | INFO     | current chi2=0.8204155740666748 (change=0.07106898973805065 %)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,338 | INFO     | left removable region: 20
[2026-03-08 22:52:10] 2026-03-09 02:51:33,338 | INFO     | sum of square deviations: 1931606481.9782648
[2026-03-08 22:52:10] 2026-03-09 02:51:33,339 | INFO     | sum of deviations: -8194844532.478266
[2026-03-08 22:52:10] 2026-03-09 02:51:33,339 | INFO     | mean x: 1773018396.5108695
[2026-03-08 22:52:10] 2026-03-09 02:51:33,340 | INFO     | mean y: 2505103.7391304346
[2026-03-08 22:52:10] 2026-03-09 02:51:33,340 | INFO     | intersect: 7524539352.531827
[2026-03-08 22:52:10] 2026-03-09 02:51:33,340 | INFO     | chi2: 0.009134937035745683
[2026-03-08 22:52:10] 2026-03-09 02:51:33,340 | INFO     | current memory leak: -4.24 B/s (using 184 data points, chi2=0.01)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,340 | INFO     | could have reported an average CPU frequency of 3103 MHz (11 samples)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,341 | INFO     | ..............................
[2026-03-08 22:52:10] 2026-03-09 02:51:33,341 | INFO     | . Timing measurements:
[2026-03-08 22:52:10] 2026-03-09 02:51:33,341 | INFO     | . get job = 0 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,341 | INFO     | . initial setup = 1 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,341 | INFO     | . payload setup = 11 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,361 | INFO     | . stage-in = 0 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,361 | INFO     | . payload execution = 13100 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,361 | INFO     | . stage-out = 2 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,362 | INFO     | . log creation = 0 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,362 | INFO     | ..............................
[2026-03-08 22:52:10] 2026-03-09 02:51:33,434 | INFO     | 
[2026-03-08 22:52:10] 2026-03-09 02:51:33,434 | INFO     | job summary report
[2026-03-08 22:52:10] 2026-03-09 02:51:33,434 | INFO     | --------------------------------------------------
[2026-03-08 22:52:10] 2026-03-09 02:51:33,434 | INFO     | PanDA job id: 7046497818
[2026-03-08 22:52:10] 2026-03-09 02:51:33,434 | INFO     | task id: 48966988
[2026-03-08 22:52:10] 2026-03-09 02:51:33,434 | INFO     | errors: (none)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,434 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | pilot state: finished 
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | transexitcode: 0
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | exeerrorcode: 0
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | exeerrordiag: 
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | exitcode: 0
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | exitmsg: OK
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | cpuconsumptiontime: 40308 s
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | nevents: 400
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | neventsw: 0
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | pid: 645043
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | pgrp: 645043
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | corecount: 8
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | event service: False
[2026-03-08 22:52:10] 2026-03-09 02:51:33,435 | INFO     | sizes: {0: 2280271, 1: 2280271, 11: 2280299, 13115: 2310519, 13118: 2319517, 13121: 2319573, 13122: 2319895}
[2026-03-08 22:52:10] 2026-03-09 02:51:33,436 | INFO     | --------------------------------------------------
[2026-03-08 22:52:10] 2026-03-09 02:51:33,436 | INFO     | 
[2026-03-08 22:52:10] 2026-03-09 02:51:33,436 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-08 22:52:10] 2026-03-09 02:51:33,469 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,469 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,469 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,469 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,471 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 22:52:10] 2026-03-09 02:51:33,471 | INFO     | job 7046497818 has completed (purged errors)
[2026-03-08 22:52:10] 2026-03-09 02:51:33,471 | INFO     | overall cleanup function is called
[2026-03-08 22:52:10] 2026-03-09 02:51:34,480 | INFO     | --- collectZombieJob: --- 10, [645043]
[2026-03-08 22:52:10] 2026-03-09 02:51:34,480 | INFO     | zombie collector waiting for pid 645043
[2026-03-08 22:52:10] 2026-03-09 02:51:34,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 22:52:10] 2026-03-09 02:51:34,484 | INFO     | collected zombie processes
[2026-03-08 22:52:10] 2026-03-09 02:51:34,484 | INFO     | will attempt to kill all subprocesses of pid=645043
[2026-03-08 22:52:10] 2026-03-09 02:51:35,115 | INFO     | process IDs to be killed: [645043] (in reverse order)
[2026-03-08 22:52:10] 2026-03-09 02:51:35,358 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 22:52:10] 2026-03-09 02:51:35,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 22:52:10] 2026-03-09 02:51:35,434 | INFO     | did not find any defunct processes belonging to 645043
[2026-03-08 22:52:10] 2026-03-09 02:51:35,451 | INFO     | did not find any defunct processes belonging to 645043
[2026-03-08 22:52:10] 2026-03-09 02:51:35,452 | INFO     | ready for new job
[2026-03-08 22:52:10] 2026-03-09 02:51:35,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 22:52:10] 2026-03-09 02:51:35,455 | INFO     | **************************************
[2026-03-08 22:52:10] 2026-03-09 02:51:35,455 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 22:52:10] 2026-03-09 02:51:35,455 | INFO     | **************************************
[2026-03-08 22:52:10] 2026-03-09 02:51:35,455 | INFO     | 
[2026-03-08 22:52:10] 2026-03-09 02:51:35,465 | INFO     | architecture information:
[2026-03-08 22:52:10] 2026-03-09 02:51:35,469 | INFO     | executing command: cat /etc/os-release
[2026-03-08 22:52:10] 2026-03-09 02:51:35,504 | INFO     | cat /etc/os-release:
[2026-03-08 22:52:10] NAME="CentOS Linux"
[2026-03-08 22:52:10] VERSION="7 (Core)"
[2026-03-08 22:52:10] ID="centos"
[2026-03-08 22:52:10] ID_LIKE="rhel fedora"
[2026-03-08 22:52:10] VERSION_ID="7"
[2026-03-08 22:52:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 22:52:10] ANSI_COLOR="0;31"
[2026-03-08 22:52:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 22:52:10] HOME_URL="https://www.centos.org/"
[2026-03-08 22:52:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 22:52:10] 
[2026-03-08 22:52:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 22:52:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 22:52:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 22:52:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 22:52:10] 
[2026-03-08 22:52:10] 2026-03-09 02:51:35,504 | INFO     | **************************************
[2026-03-08 22:52:10] 2026-03-09 02:51:36,007 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-08 22:52:10] 2026-03-09 02:51:36,029 | INFO     | sufficient remaining disk space (125654007808 B)
[2026-03-08 22:52:10] 2026-03-09 02:51:36,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 22:52:10] 2026-03-09 02:51:36,030 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 22:52:10] 2026-03-09 02:51:36,030 | INFO     | update_server=False
[2026-03-08 22:52:10] 2026-03-09 02:51:36,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 22:52:10] 2026-03-09 02:51:36,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 22:52:10] 2026-03-09 02:51:36,031 | INFO     | aborting loop
[2026-03-08 22:52:10] 2026-03-09 02:51:36,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 22:52:10] 2026-03-09 02:51:36,032 | INFO     | all data control threads have been joined
[2026-03-08 22:52:10] 2026-03-09 02:51:36,342 | INFO     | all job control threads have been joined
[2026-03-08 22:52:10] 2026-03-09 02:51:36,855 | INFO     | all payload control threads have been joined
[2026-03-08 22:52:10] 2026-03-09 02:51:37,037 | INFO     | [job] job monitor thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,049 | INFO     | [job] retrieve thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,051 | INFO     | [data] control thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,189 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,348 | INFO     | [job] control thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,862 | INFO     | [payload] control thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,864 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,865 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,875 | INFO     | [job] validate thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:37,956 | INFO     | [data] copytool_in thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:38,038 | INFO     | [data] copytool_out thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:38,377 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:38,409 | INFO     | [payload] failed_post thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:38,418 | INFO     | [payload] validate_post thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:38,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 22:52:10] 2026-03-09 02:51:38,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 22:52:10] 2026-03-09 02:51:39,473 | INFO     | [job] queue monitor thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:51:42,925 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 22:52:10] 2026-03-09 02:52:03,530 | INFO     | [monitor] cgroup control has ended
[2026-03-08 22:52:10] 2026-03-09 02:52:04,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139931774490432)>', '<ExcThread(monitor, started 139931401824000)>']
[2026-03-08 22:52:10] 2026-03-09 02:52:06,011 | INFO     | PID=629709 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 22:52:10] 2026-03-09 02:52:06,012 | INFO     | .. there are 29 such processes running
[2026-03-08 22:52:10] 2026-03-09 02:52:06,014 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 22:52:10] 2026-03-09 02:52:06,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 22:52:10] 2026-03-09 02:52:06,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 22:52:10] 2026-03-09 02:52:06,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 22:52:10] 2026-03-09 02:52:06,014 | INFO     | [monitor] control thread has ended
[2026-03-08 22:52:10] 2026-03-09 02:52:09,876 | INFO     | all workflow threads have been joined
[2026-03-08 22:52:10] 2026-03-09 02:52:09,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 22:52:10] 2026-03-09 02:52:09,877 | INFO     | traces error code: 0
[2026-03-08 22:52:10] 2026-03-09 02:52:09,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 22:52:10] 2026-03-09 02:52:09,997 [wrapper] ==== pilot stdout END ====
[2026-03-08 22:52:10] 2026-03-09 02:52:10,001 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 22:52:10] 2026-03-09 02:52:10,007 [wrapper] pilotpid: 629709
[2026-03-08 22:52:10] 2026-03-09 02:52:10,014 [wrapper] Pilot exit status: 0
[2026-03-08 22:52:10] 2026-03-09 02:52:10,063 [wrapper] pandaids: 7046497818 7046497818
[2026-03-08 22:52:10] 2026-03-09 02:52:10,223 [wrapper] cleanup supervisor_pilot 1367928 629710
[2026-03-08 22:52:10] 2026-03-09 02:52:10,229 [wrapper] Test setup, not cleaning
[2026-03-08 22:52:10] 2026-03-09 02:52:10,240 [wrapper] apfmon messages muted
[2026-03-08 22:52:10] 2026-03-09 02:52:10,270 [wrapper] ==== wrapper stdout END ====
[2026-03-08 22:52:10] 2026-03-09 02:52:10,282 [wrapper] ==== wrapper stderr END ====
[2026-03-08 22:52:10]  *** Error codes and diagnostics ***
[2026-03-08 22:52:10]     "exeErrorCode": 0,
[2026-03-08 22:52:10]     "exeErrorDiag": "",
[2026-03-08 22:52:10]     "pilotErrorCode": 0,
[2026-03-08 22:52:10]     "pilotErrorDiag": "",
[2026-03-08 22:52:10]  *** Listing of results directory ***
[2026-03-08 22:52:10] total 617220
[2026-03-08 22:52:10] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas    584627 Mar  8 14:37 pilot3.tar.gz
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas      5111 Mar  8 14:37 queuedata.json
[2026-03-08 22:52:10] -rwx------. 1 boincer umatlas     36322 Mar  8 14:37 runpilot2-wrapper.sh
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas       100 Mar  8 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 22:52:10] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 18:49 run_atlas
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas       105 Mar  8 18:49 job.xml
[2026-03-08 22:52:10] -rw-r--r--. 3 boincer umatlas 210467114 Mar  8 18:49 EVNT.48966985._000680.pool.root.1
[2026-03-08 22:52:10] -rw-r--r--. 3 boincer umatlas 210467114 Mar  8 18:49 ATLAS.root_0
[2026-03-08 22:52:10] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 18:49 start_atlas.sh
[2026-03-08 22:52:10] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 18:49 shared
[2026-03-08 22:52:10] -rw-r--r--. 2 boincer umatlas    597966 Mar  8 18:49 input.tar.gz
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas         0 Mar  8 18:49 boinc_lockfile
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas      2592 Mar  8 19:12 pandaJob.out
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas        57 Mar  8 19:12 setup.sh.local
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas    999108 Mar  8 19:12 agis_schedconf.cvmfs.json
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas       429 Mar  8 19:12 workernode_map.json
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas      6957 Mar  8 22:49 init_data.xml
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas 202954883 Mar  8 22:50 HITS.48966988._018442.pool.root.1
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas       529 Mar  8 22:50 boinc_task_state.xml
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas      1049 Mar  8 22:51 memory_monitor_summary.json
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas   1511578 Mar  8 22:51 agis_ddmendpoints.agis.ALL.json
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas    428428 Mar  8 22:51 log.48966988._018442.job.log.tgz.1
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas      6359 Mar  8 22:51 heartbeat.json
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas        96 Mar  8 22:52 pilot_heartbeat.json
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 22:52 boinc_mmap_file
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas        27 Mar  8 22:52 wrapper_checkpoint.txt
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas      4820 Mar  8 22:52 pilotlog.txt
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas   1674162 Mar  8 22:52 log.48966988._018442.job.log.1
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas       357 Mar  8 22:52 output.list
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas       620 Mar  8 22:52 runtime_log
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas   2119680 Mar  8 22:52 result.tar.gz
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas       785 Mar  8 22:52 wUoMDmUBYJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMsZLDm9uUOFn.diag
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas      9427 Mar  8 22:52 runtime_log.err
[2026-03-08 22:52:10] -rw-r--r--. 1 boincer umatlas     23181 Mar  8 22:52 stderr.txt
[2026-03-08 22:52:10] HITS file was successfully produced:
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas 202954883 Mar  8 22:50 shared/HITS.pool.root.1
[2026-03-08 22:52:10]  *** Contents of shared directory: ***
[2026-03-08 22:52:10] total 406416
[2026-03-08 22:52:10] -rw-r--r--. 3 boincer umatlas 210467114 Mar  8 18:49 ATLAS.root_0
[2026-03-08 22:52:10] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 18:49 start_atlas.sh
[2026-03-08 22:52:10] -rw-r--r--. 2 boincer umatlas    597966 Mar  8 18:49 input.tar.gz
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas 202954883 Mar  8 22:50 HITS.pool.root.1
[2026-03-08 22:52:10] -rw-------. 1 boincer umatlas   2119680 Mar  8 22:52 result.tar.gz
22:52:12 (609173): run_atlas exited; CPU time 40765.561479
22:52:12 (609173): called boinc_finish(0)

</stderr_txt>
]]>

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