Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:34:42 (12101): wrapper (7.7.26015): starting
18:34:42 (12101): wrapper: running run_atlas (--nthreads 12)
[2026-03-08 18:34:42] Arguments: --nthreads 12
[2026-03-08 18:34:42] Threads: 12
[2026-03-08 18:34:42] Checking for CVMFS
[2026-03-08 18:34:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 18:34:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 18:34:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 18:34:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 18:34:42] 2.11.2.0 2987 435122 96556 157055 0 51 15347695 20275200 1 130560 1 186831646 99.949 25848937 17228 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-08 18:34:42] CVMFS is ok
[2026-03-08 18:34:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 18:34:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 18:34:42] Further information can be found at the LHC@home message board.
[2026-03-08 18:34:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 18:34:42] Checking for apptainer binary...
[2026-03-08 18:34:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 18:34:42] Running /usr/bin/apptainer --version
[2026-03-08 18:34:42] apptainer version 1.3.2-1.el7
[2026-03-08 18:34:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 18:34:44] c-205-19.aglt2.org
[2026-03-08 18:34:44] apptainer works
[2026-03-08 18:34:44] Set ATHENA_PROC_NUMBER=12
[2026-03-08 18:34:44] Set ATHENA_CORE_NUMBER=12
[2026-03-08 18:34:44] Starting ATLAS job with PandaID=7033637198
[2026-03-08 18:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 20:05:19]  *** The last 200 lines of the pilot log: ***
[2026-03-08 20:05:19]  filesize=396344
[2026-03-08 20:05:19]  filetype=log
[2026-03-08 20:05:19]  guid=b2636914-d1eb-4884-87d8-997e8de850f5
[2026-03-08 20:05:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 20:05:19]  is_altstaged=None
[2026-03-08 20:05:19]  is_tar=False
[2026-03-08 20:05:19]  lfn=log.48838581._002093.job.log.tgz.1
[2026-03-08 20:05:19]  mtime=0
[2026-03-08 20:05:19]  protocol_id=None
[2026-03-08 20:05:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 20:05:19]  replicas=None
[2026-03-08 20:05:19]  scope=mc23_13p6TeV
[2026-03-08 20:05:19]  status=None
[2026-03-08 20:05:19]  status_code=0
[2026-03-08 20:05:19]  storage_token=
[2026-03-08 20:05:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7033637198/log.48838581._002093.job.log.tgz.1
[2026-03-08 20:05:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/56/log.48838581._002093.job.log.tgz.1
[2026-03-08 20:05:19]  workdir=None
[2026-03-08 20:05:19] ]
[2026-03-08 20:05:19] 2026-03-09 00:04:51,895 | INFO     | transferring file log.48838581._002093.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7033637198/log.48838581._002093.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-08 20:05:19] 2026-03-09 00:04:51,896 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7033637198/log.48838581._002093.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838581._002093.job
[2026-03-08 20:05:19] 2026-03-09 00:04:51,916 | INFO     | adding to output.list: log.48838581._002093.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/56/log.48838581._002093.job.log.tg
[2026-03-08 20:05:19] 2026-03-09 00:04:51,917 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 20:05:19] 2026-03-09 00:04:51,917 | INFO     | summary of transferred files:
[2026-03-08 20:05:19] 2026-03-09 00:04:51,917 | INFO     |  -- lfn=log.48838581._002093.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 20:05:19] 2026-03-09 00:04:51,917 | INFO     | stage-out finished correctly
[2026-03-08 20:05:19] 2026-03-09 00:04:52,173 | INFO     | time since job start (5387s) is within the limit (349056.0s)
[2026-03-08 20:05:19] 2026-03-09 00:04:52,212 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 20:05:19] 2026-03-09 00:04:52,835 | INFO     | monitor loop #409: job 0:7033637198 is in state 'finished'
[2026-03-08 20:05:19] 2026-03-09 00:04:52,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,178 | INFO     | time since job start (5389s) is within the limit (349056.0s)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,244 | INFO     | job 7033637198 has state=finished
[2026-03-08 20:05:19] 2026-03-09 00:04:54,244 | INFO     | preparing for final server update for job 7033637198 in state='finished'
[2026-03-08 20:05:19] 2026-03-09 00:04:54,245 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7033637198/jobReport.json
[2026-03-08 20:05:19] 2026-03-09 00:04:54,247 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-08 20:05:19] 2026-03-09 00:04:54,247 | INFO     | this job has now completed (state=finished)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,247 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,247 | INFO     | log transfer has been attempted: DONE
[2026-03-08 20:05:19] 2026-03-09 00:04:54,247 | INFO     | job 7033637198 has finished - writing final server update
[2026-03-08 20:05:19] 2026-03-09 00:04:54,248 | INFO     | total number of processed events: 400 (read)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,249 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7033637198/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,250 | INFO     | extracted standard info from prmon json
[2026-03-08 20:05:19] 2026-03-09 00:04:54,250 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 20:05:19] 2026-03-09 00:04:54,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 20:05:19] 2026-03-09 00:04:54,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 20:05:19] 2026-03-09 00:04:54,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 20:05:19] 2026-03-09 00:04:54,252 | INFO     | fitting pss+swap vs Time
[2026-03-08 20:05:19] 2026-03-09 00:04:54,252 | INFO     | sum of square deviations: 164765880.0
[2026-03-08 20:05:19] 2026-03-09 00:04:54,253 | INFO     | sum of deviations: -7064222363.999999
[2026-03-08 20:05:19] 2026-03-09 00:04:54,253 | INFO     | mean x: 1773012074.0
[2026-03-08 20:05:19] 2026-03-09 00:04:54,253 | INFO     | mean y: 2792429.024691358
[2026-03-08 20:05:19] 2026-03-09 00:04:54,253 | INFO     | intersect: 76019450397.24493
[2026-03-08 20:05:19] 2026-03-09 00:04:54,253 | INFO     | chi2: 0.12951742312111816
[2026-03-08 20:05:19] 2026-03-09 00:04:54,253 | INFO     | current memory leak: -42.87 B/s (using 81 data points, chi2=0.13)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,254 | INFO     | could have reported an average CPU frequency of 1784 MHz (6 samples)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,254 | INFO     | ..............................
[2026-03-08 20:05:19] 2026-03-09 00:04:54,254 | INFO     | . Timing measurements:
[2026-03-08 20:05:19] 2026-03-09 00:04:54,254 | INFO     | . get job = 0 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,254 | INFO     | . initial setup = 7 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,254 | INFO     | . payload setup = 7 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,254 | INFO     | . stage-in = 0 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,255 | INFO     | . payload execution = 5363 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,255 | INFO     | . stage-out = 0 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,255 | INFO     | . log creation = 0 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,255 | INFO     | ..............................
[2026-03-08 20:05:19] 2026-03-09 00:04:54,332 | INFO     | 
[2026-03-08 20:05:19] 2026-03-09 00:04:54,332 | INFO     | job summary report
[2026-03-08 20:05:19] 2026-03-09 00:04:54,332 | INFO     | --------------------------------------------------
[2026-03-08 20:05:19] 2026-03-09 00:04:54,332 | INFO     | PanDA job id: 7033637198
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | task id: 48838581
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | errors: (none)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | pilot state: finished 
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | transexitcode: 0
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | exeerrorcode: 0
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | exeerrordiag: 
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | exitcode: 0
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | exitmsg: OK
[2026-03-08 20:05:19] 2026-03-09 00:04:54,333 | INFO     | cpuconsumptiontime: 58141 s
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | nevents: 400
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | neventsw: 0
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | pid: 21716
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | pgrp: 21716
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | corecount: 12
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | event service: False
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | sizes: {0: 2279169, 1: 2280287, 12: 2280287, 5374: 2306718, 5375: 2315772, 5377: 2315910}
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | --------------------------------------------------
[2026-03-08 20:05:19] 2026-03-09 00:04:54,334 | INFO     | 
[2026-03-08 20:05:19] 2026-03-09 00:04:54,335 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-08 20:05:19] 2026-03-09 00:04:54,357 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,358 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,358 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,358 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,361 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,361 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 20:05:19] 2026-03-09 00:04:54,361 | INFO     | job 7033637198 has completed (purged errors)
[2026-03-08 20:05:19] 2026-03-09 00:04:54,361 | INFO     | overall cleanup function is called
[2026-03-08 20:05:19] 2026-03-09 00:04:55,369 | INFO     | --- collectZombieJob: --- 10, [21716]
[2026-03-08 20:05:19] 2026-03-09 00:04:55,370 | INFO     | zombie collector waiting for pid 21716
[2026-03-08 20:05:19] 2026-03-09 00:04:55,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 20:05:19] 2026-03-09 00:04:55,370 | INFO     | collected zombie processes
[2026-03-08 20:05:19] 2026-03-09 00:04:55,370 | INFO     | will attempt to kill all subprocesses of pid=21716
[2026-03-08 20:05:19] 2026-03-09 00:04:55,460 | INFO     | process IDs to be killed: [21716] (in reverse order)
[2026-03-08 20:05:19] 2026-03-09 00:04:55,510 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 20:05:19] 2026-03-09 00:04:55,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 20:05:19] 2026-03-09 00:04:55,513 | INFO     | did not find any defunct processes belonging to 21716
[2026-03-08 20:05:19] 2026-03-09 00:04:55,516 | INFO     | did not find any defunct processes belonging to 21716
[2026-03-08 20:05:19] 2026-03-09 00:04:55,516 | INFO     | ready for new job
[2026-03-08 20:05:19] 2026-03-09 00:04:55,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 20:05:19] 2026-03-09 00:04:55,517 | INFO     | **************************************
[2026-03-08 20:05:19] 2026-03-09 00:04:55,517 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 20:05:19] 2026-03-09 00:04:55,517 | INFO     | **************************************
[2026-03-08 20:05:19] 2026-03-09 00:04:55,518 | INFO     | 
[2026-03-08 20:05:19] 2026-03-09 00:04:55,518 | INFO     | architecture information:
[2026-03-08 20:05:19] 2026-03-09 00:04:55,519 | INFO     | executing command: cat /etc/os-release
[2026-03-08 20:05:19] 2026-03-09 00:04:55,534 | INFO     | cat /etc/os-release:
[2026-03-08 20:05:19] NAME="CentOS Linux"
[2026-03-08 20:05:19] VERSION="7 (Core)"
[2026-03-08 20:05:19] ID="centos"
[2026-03-08 20:05:19] ID_LIKE="rhel fedora"
[2026-03-08 20:05:19] VERSION_ID="7"
[2026-03-08 20:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 20:05:19] ANSI_COLOR="0;31"
[2026-03-08 20:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 20:05:19] HOME_URL="https://www.centos.org/"
[2026-03-08 20:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 20:05:19] 
[2026-03-08 20:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 20:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 20:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 20:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 20:05:19] 
[2026-03-08 20:05:19] 2026-03-09 00:04:55,534 | INFO     | **************************************
[2026-03-08 20:05:19] 2026-03-09 00:04:56,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-08 20:05:19] 2026-03-09 00:04:56,062 | INFO     | sufficient remaining disk space (29169287168 B)
[2026-03-08 20:05:19] 2026-03-09 00:04:56,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 20:05:19] 2026-03-09 00:04:56,062 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 20:05:19] 2026-03-09 00:04:56,063 | INFO     | update_server=False
[2026-03-08 20:05:19] 2026-03-09 00:04:56,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 20:05:19] 2026-03-09 00:04:56,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:05:19] 2026-03-09 00:04:56,063 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-08 20:05:19] 2026-03-09 00:04:56,064 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 20:05:19] 2026-03-09 00:04:56,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 20:05:19] 2026-03-09 00:04:56,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 20:05:19] 2026-03-09 00:04:56,205 | INFO     | all job control threads have been joined
[2026-03-08 20:05:19] 2026-03-09 00:04:56,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:05:19] 2026-03-09 00:04:56,344 | INFO     | aborting loop
[2026-03-08 20:05:19] 2026-03-09 00:04:56,506 | INFO     | all payload control threads have been joined
[2026-03-08 20:05:19] 2026-03-09 00:04:57,068 | INFO     | [job] retrieve thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,069 | INFO     | [job] queue monitor thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,100 | INFO     | all data control threads have been joined
[2026-03-08 20:05:19] 2026-03-09 00:04:57,211 | INFO     | [job] control thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,223 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,349 | INFO     | [job] job monitor thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 20:05:19] 2026-03-09 00:04:57,512 | INFO     | [payload] control thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,762 | INFO     | [job] validate thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,866 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,922 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:57,928 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-03-08 20:05:19] 2026-03-09 00:04:58,106 | INFO     | [data] control thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:58,174 | INFO     | [payload] failed_post thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:58,211 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:58,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 20:05:19] 2026-03-09 00:04:58,533 | INFO     | [payload] validate_post thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:58,546 | INFO     | [data] copytool_in thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:04:59,509 | INFO     | [data] copytool_out thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:05:02,302 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 20:05:19] 2026-03-09 00:05:13,168 | INFO     | [monitor] cgroup control has ended
[2026-03-08 20:05:19] 2026-03-09 00:05:14,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140204963648)>', '<ExcThread(monitor, started 140139380586240)>']
[2026-03-08 20:05:19] 2026-03-09 00:05:15,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 20:05:19] 2026-03-09 00:05:15,156 | INFO     | [monitor] control thread has ended
[2026-03-08 20:05:19] 2026-03-09 00:05:19,268 | INFO     | all workflow threads have been joined
[2026-03-08 20:05:19] 2026-03-09 00:05:19,268 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 20:05:19] 2026-03-09 00:05:19,268 | INFO     | traces error code: 0
[2026-03-08 20:05:19] 2026-03-09 00:05:19,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 20:05:19] 2026-03-09 00:05:19,353 [wrapper] ==== pilot stdout END ====
[2026-03-08 20:05:19] 2026-03-09 00:05:19,358 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 20:05:19] 2026-03-09 00:05:19,361 [wrapper] pilotpid: 16074
[2026-03-08 20:05:19] 2026-03-09 00:05:19,365 [wrapper] Pilot exit status: 0
[2026-03-08 20:05:19] 2026-03-09 00:05:19,381 [wrapper] pandaids: 7033637198
[2026-03-08 20:05:19] 2026-03-09 00:05:19,422 [wrapper] cleanup supervisor_pilot 13872 16075
[2026-03-08 20:05:19] 2026-03-09 00:05:19,426 [wrapper] Test setup, not cleaning
[2026-03-08 20:05:19] 2026-03-09 00:05:19,430 [wrapper] apfmon messages muted
[2026-03-08 20:05:19] 2026-03-09 00:05:19,434 [wrapper] ==== wrapper stdout END ====
[2026-03-08 20:05:19] 2026-03-09 00:05:19,438 [wrapper] ==== wrapper stderr END ====
[2026-03-08 20:05:19]  *** Error codes and diagnostics ***
[2026-03-08 20:05:19]     "exeErrorCode": 0,
[2026-03-08 20:05:19]     "exeErrorDiag": "",
[2026-03-08 20:05:19]     "pilotErrorCode": 0,
[2026-03-08 20:05:19]     "pilotErrorDiag": "",
[2026-03-08 20:05:19]  *** Listing of results directory ***
[2026-03-08 20:05:19] total 511016
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas    584627 Feb 28 13:22 pilot3.tar.gz
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas      5111 Feb 28 13:23 queuedata.json
[2026-03-08 20:05:19] -rwx------ 1 boincer umatlas     36322 Feb 28 13:23 runpilot2-wrapper.sh
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas       100 Mar  8 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 20:05:19] -rwxr-xr-x 1 boincer umatlas      7986 Mar  8 18:34 run_atlas
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas       105 Mar  8 18:34 job.xml
[2026-03-08 20:05:19] -rw-r--r-- 2 boincer umatlas 285146572 Mar  8 18:34 EVNT.48220205._000094.pool.root.1
[2026-03-08 20:05:19] -rw-r--r-- 2 boincer umatlas     15845 Mar  8 18:34 start_atlas.sh
[2026-03-08 20:05:19] drwxrwx--x 2 boincer umatlas      4096 Mar  8 18:34 shared
[2026-03-08 20:05:19] -rw-r--r-- 2 boincer umatlas    597972 Mar  8 18:34 input.tar.gz
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas         0 Mar  8 18:34 boinc_lockfile
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas      2587 Mar  8 18:34 pandaJob.out
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas        57 Mar  8 18:34 setup.sh.local
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas    999108 Mar  8 18:34 agis_schedconf.cvmfs.json
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas   1511578 Mar  8 18:34 agis_ddmendpoints.agis.ALL.json
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas       433 Mar  8 18:35 workernode_map.json
[2026-03-08 20:05:19] drwx------ 5 boincer umatlas      4096 Mar  8 18:35 pilot3
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas      5952 Mar  8 20:01 init_data.xml
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas        95 Mar  8 20:04 pilot_heartbeat.json
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas 231868353 Mar  8 20:04 HITS.48838581._002093.pool.root.1
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas       529 Mar  8 20:04 boinc_task_state.xml
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas      1045 Mar  8 20:04 memory_monitor_summary.json
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas    396344 Mar  8 20:04 log.48838581._002093.job.log.tgz.1
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas      6405 Mar  8 20:04 heartbeat.json
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas        27 Mar  8 20:05 wrapper_checkpoint.txt
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas      8192 Mar  8 20:05 boinc_mmap_file
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas      4548 Mar  8 20:05 pilotlog.txt
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas    772821 Mar  8 20:05 log.48838581._002093.job.log.1
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas       357 Mar  8 20:05 output.list
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas       620 Mar  8 20:05 runtime_log
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas   1187840 Mar  8 20:05 result.tar.gz
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas      9343 Mar  8 20:05 runtime_log.err
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas       659 Mar  8 20:05 ACwNDmX9dG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmL25KDmxZbn3m.diag
[2026-03-08 20:05:19] -rw-r--r-- 1 boincer umatlas     21111 Mar  8 20:05 stderr.txt
[2026-03-08 20:05:19] HITS file was successfully produced:
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas 231868353 Mar  8 20:04 shared/HITS.pool.root.1
[2026-03-08 20:05:19]  *** Contents of shared directory: ***
[2026-03-08 20:05:19] total 506664
[2026-03-08 20:05:19] -rw-r--r-- 2 boincer umatlas 285146572 Mar  8 18:34 ATLAS.root_0
[2026-03-08 20:05:19] -rw-r--r-- 2 boincer umatlas     15845 Mar  8 18:34 start_atlas.sh
[2026-03-08 20:05:19] -rw-r--r-- 2 boincer umatlas    597972 Mar  8 18:34 input.tar.gz
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas 231868353 Mar  8 20:04 HITS.pool.root.1
[2026-03-08 20:05:19] -rw------- 1 boincer umatlas   1187840 Mar  8 20:05 result.tar.gz
20:05:21 (12101): run_atlas exited; CPU time 58124.883548
20:05:21 (12101): called boinc_finish(0)

</stderr_txt>
]]>

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