Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:42:35 (2834404): wrapper (7.7.26015): starting
16:42:35 (2834404): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 16:42:35] Arguments: --nthreads 4
[2026-03-09 16:42:35] Threads: 4
[2026-03-09 16:42:35] Checking for CVMFS
[2026-03-09 16:42:35] No cvmfs_config command found, will try listing directly
[2026-03-09 16:42:35] CVMFS is ok
[2026-03-09 16:42:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:42:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:42:35] Further information can be found at the LHC@home message board.
[2026-03-09 16:42:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:42:35] Checking for apptainer binary...
[2026-03-09 16:42:35] which: no apptainer in ((null))
[2026-03-09 16:42:35] apptainer is not installed, using version from CVMFS
[2026-03-09 16:42:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:42:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-09 16:42:35] apptainer works
[2026-03-09 16:42:35] Set ATHENA_PROC_NUMBER=4
[2026-03-09 16:42:35] Set ATHENA_CORE_NUMBER=4
[2026-03-09 16:42:35] Starting ATLAS job with PandaID=7039980907
[2026-03-09 16:42:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:04:01]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:04:01]  protocol_id=None
[2026-03-09 18:04:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 18:04:01]  replicas=None
[2026-03-09 18:04:01]  scope=mc23_13p6TeV
[2026-03-09 18:04:01]  status=None
[2026-03-09 18:04:01]  status_code=0
[2026-03-09 18:04:01]  storage_token=
[2026-03-09 18:04:01]  surl=/var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7039980907/log.48955006._027768.job.log.tgz.1
[2026-03-09 18:04:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/a4/log.48955006._027768.job.log.tgz.1
[2026-03-09 18:04:01]  workdir=None
[2026-03-09 18:04:01] ]
[2026-03-09 18:04:01] 2026-03-09 17:02:55,219 | INFO     | transferring file log.48955006._027768.job.log.tgz.1 from /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7039980907/log.48955006._027768.job.log.tgz.1 to /var/lib/
[2026-03-09 18:04:01] 2026-03-09 17:02:55,220 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7039980907/log.48955006._027768.job.log.tgz.1 /var/lib/boinc/var/slot168/slots/0/
[2026-03-09 18:04:01] 2026-03-09 17:02:55,234 | INFO     | adding to output.list: log.48955006._027768.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/a4/log.48955006._027768.job.log.tg
[2026-03-09 18:04:01] 2026-03-09 17:02:55,235 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 18:04:01] 2026-03-09 17:02:55,235 | INFO     | summary of transferred files:
[2026-03-09 18:04:01] 2026-03-09 17:02:55,235 | INFO     |  -- lfn=log.48955006._027768.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 18:04:01] 2026-03-09 17:02:55,235 | INFO     | stage-out finished correctly
[2026-03-09 18:04:01] 2026-03-09 17:02:55,630 | INFO     | time since job start (4808s) is within the limit (349056.0s)
[2026-03-09 18:04:01] 2026-03-09 17:02:57,637 | INFO     | time since job start (4810s) is within the limit (349056.0s)
[2026-03-09 18:04:01] 2026-03-09 17:02:57,815 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 18:04:01] 2026-03-09 17:02:59,597 | WARNING  | process 2859429 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 18:04:01] 2026-03-09 17:02:59,598 | INFO     | using path: /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7039980907/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,642 | INFO     | time since job start (4812s) is within the limit (349056.0s)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,808 | INFO     | job 7039980907 has state=finished
[2026-03-09 18:04:01] 2026-03-09 17:02:59,808 | INFO     | preparing for final server update for job 7039980907 in state='finished'
[2026-03-09 18:04:01] 2026-03-09 17:02:59,808 | INFO     | reading metadata from: /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7039980907/jobReport.json
[2026-03-09 18:04:01] 2026-03-09 17:02:59,810 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot168/slots/0/workernode_map.json
[2026-03-09 18:04:01] 2026-03-09 17:02:59,811 | INFO     | this job has now completed (state=finished)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,811 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,811 | INFO     | log transfer has been attempted: DONE
[2026-03-09 18:04:01] 2026-03-09 17:02:59,811 | INFO     | job 7039980907 has finished - writing final server update
[2026-03-09 18:04:01] 2026-03-09 17:02:59,811 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4124047/.job.ad'
[2026-03-09 18:04:01] 2026-03-09 17:02:59,812 | INFO     | total number of processed events: 400 (read)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,838 | INFO     | using path: /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7039980907/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,839 | INFO     | extracted standard info from prmon json
[2026-03-09 18:04:01] 2026-03-09 17:02:59,839 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 18:04:01] 2026-03-09 17:02:59,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 18:04:01] 2026-03-09 17:02:59,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 18:04:01] 2026-03-09 17:02:59,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | sum of square deviations: 115715658.0
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | sum of deviations: 2049325.5000000037
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | mean x: 1773073457.5
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | mean y: 2326722.0416666665
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | intersect: -29074427.229142673
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | chi2: 0.00013914106656547662
[2026-03-09 18:04:01] 2026-03-09 17:02:59,841 | INFO     | current memory leak: 0.02 B/s (using 72 data points, chi2=0.00)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | could have reported an average CPU frequency of 3589 MHz (6 samples)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | ..............................
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . Timing measurements:
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . get job = 0 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . initial setup = 4 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . payload setup = 4 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . stage-in = 0 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . payload execution = 4787 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . stage-out = 0 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | . log creation = 0 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,842 | INFO     | ..............................
[2026-03-09 18:04:01] 2026-03-09 17:02:59,912 | INFO     | 
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | job summary report
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | --------------------------------------------------
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | PanDA job id: 7039980907
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | task id: 48955006
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | errors: (none)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | pilot state: finished 
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | transexitcode: 0
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | exeerrorcode: 0
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | exeerrordiag: 
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | exitcode: 0
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | exitmsg: OK
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | cpuconsumptiontime: 18324 s
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | nevents: 400
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | neventsw: 0
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | pid: 2859429
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | pgrp: 2859429
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | corecount: 4
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | event service: False
[2026-03-09 18:04:01] 2026-03-09 17:02:59,914 | INFO     | sizes: {0: 2280244, 11: 2280244, 4796: 2306531, 4797: 2315553, 4800: 2315609, 4802: 2315803}
[2026-03-09 18:04:01] 2026-03-09 17:02:59,915 | INFO     | --------------------------------------------------
[2026-03-09 18:04:01] 2026-03-09 17:02:59,915 | INFO     | 
[2026-03-09 18:04:01] 2026-03-09 17:02:59,915 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/0
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | job 7039980907 has completed (purged errors)
[2026-03-09 18:04:01] 2026-03-09 17:02:59,957 | INFO     | overall cleanup function is called
[2026-03-09 18:04:01] 2026-03-09 17:03:00,136 | INFO     | number of running child processes to parent process 2859429: 1
[2026-03-09 18:04:01] 2026-03-09 17:03:00,136 | INFO     | maximum number of monitored processes: 6
[2026-03-09 18:04:01] 2026-03-09 17:03:00,136 | INFO     | aborting job monitoring since job object (job id=7039980907) has expired
[2026-03-09 18:04:01] 2026-03-09 17:03:00,964 | INFO     | --- collectZombieJob: --- 10, [2859429]
[2026-03-09 18:04:01] 2026-03-09 17:03:00,964 | INFO     | zombie collector waiting for pid 2859429
[2026-03-09 18:04:01] 2026-03-09 17:03:00,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:04:01] 2026-03-09 17:03:00,964 | INFO     | collected zombie processes
[2026-03-09 18:04:01] 2026-03-09 17:03:00,964 | INFO     | will attempt to kill all subprocesses of pid=2859429
[2026-03-09 18:04:01] 2026-03-09 17:03:01,453 | INFO     | process IDs to be killed: [2859429] (in reverse order)
[2026-03-09 18:04:01] 2026-03-09 17:03:01,739 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:04:01] 2026-03-09 17:03:01,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:04:01] 2026-03-09 17:03:01,765 | INFO     | did not find any defunct processes belonging to 2859429
[2026-03-09 18:04:01] 2026-03-09 17:03:01,789 | INFO     | did not find any defunct processes belonging to 2859429
[2026-03-09 18:04:01] 2026-03-09 17:03:01,789 | INFO     | ready for new job
[2026-03-09 18:04:01] 2026-03-09 17:03:01,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:04:01] 2026-03-09 17:03:01,790 | INFO     | **************************************
[2026-03-09 18:04:01] 2026-03-09 17:03:01,790 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:04:01] 2026-03-09 17:03:01,790 | INFO     | **************************************
[2026-03-09 18:04:01] 2026-03-09 17:03:01,790 | INFO     | 
[2026-03-09 18:04:01] 2026-03-09 17:03:01,796 | INFO     | architecture information:
[2026-03-09 18:04:01] 2026-03-09 17:03:01,797 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:04:01] 2026-03-09 17:03:01,811 | INFO     | cat /etc/os-release:
[2026-03-09 18:04:01] NAME="CentOS Linux"
[2026-03-09 18:04:01] VERSION="7 (Core)"
[2026-03-09 18:04:01] ID="centos"
[2026-03-09 18:04:01] ID_LIKE="rhel fedora"
[2026-03-09 18:04:01] VERSION_ID="7"
[2026-03-09 18:04:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:04:01] ANSI_COLOR="0;31"
[2026-03-09 18:04:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:04:01] HOME_URL="https://www.centos.org/"
[2026-03-09 18:04:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:04:01] 
[2026-03-09 18:04:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:04:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:04:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:04:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:04:01] 
[2026-03-09 18:04:01] 2026-03-09 17:03:01,811 | INFO     | **************************************
[2026-03-09 18:04:01] 2026-03-09 17:03:02,314 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/0
[2026-03-09 18:04:01] 2026-03-09 17:03:02,331 | INFO     | sufficient remaining disk space (22253928448 B)
[2026-03-09 18:04:01] 2026-03-09 17:03:02,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:04:01] 2026-03-09 17:03:02,331 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:04:01] 2026-03-09 17:03:02,331 | INFO     | update_server=False
[2026-03-09 18:04:01] 2026-03-09 17:03:02,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:04:01] 2026-03-09 17:03:02,410 | INFO     | all job control threads have been joined
[2026-03-09 18:04:01] 2026-03-09 17:03:02,639 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 18:04:01] 2026-03-09 17:03:02,639 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 18:04:01] 2026-03-09 17:03:02,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:04:01] 2026-03-09 17:03:02,639 | INFO     | will abort loop
[2026-03-09 18:04:01] 2026-03-09 17:03:02,643 | INFO     | all data control threads have been joined
[2026-03-09 18:04:01] 2026-03-09 17:03:03,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:04:01] 2026-03-09 17:03:03,336 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,415 | INFO     | [job] control thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,447 | INFO     | [job] validate thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,493 | INFO     | all payload control threads have been joined
[2026-03-09 18:04:01] 2026-03-09 17:03:03,572 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,644 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,648 | INFO     | [data] control thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,719 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,745 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:03,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:04:01] 2026-03-09 17:03:04,068 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:04,214 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:04,498 | INFO     | [payload] control thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:04,868 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:04,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:04:01] 2026-03-09 17:03:05,304 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:05,928 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:07,875 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:12,502 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:04:01] 2026-03-09 17:03:13,507 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:04:01] 2026-03-09 17:03:33,198 | INFO     | PID=2838913 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 18:04:01] 2026-03-09 17:03:33,198 | INFO     | .. there are 59 such processes running
[2026-03-09 18:04:01] 2026-03-09 17:03:33,199 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:04:01] 2026-03-09 17:03:33,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:04:01] 2026-03-09 17:03:33,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:04:01] 2026-03-09 17:03:54,837 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:04:01] 2026-03-09 17:03:55,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22538643277632)>', '<ExcThread(monitor, started 22538404243200)>']
[2026-03-09 18:04:01] 2026-03-09 17:03:56,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:04:01] 2026-03-09 17:03:56,315 | INFO     | [monitor] control thread has ended
[2026-03-09 18:04:01] 2026-03-09 17:04:00,867 | INFO     | all workflow threads have been joined
[2026-03-09 18:04:01] 2026-03-09 17:04:00,867 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:04:01] 2026-03-09 17:04:00,867 | INFO     | traces error code: 0
[2026-03-09 18:04:01] 2026-03-09 17:04:00,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:04:01] 2026-03-09 17:04:00,996 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:04:01] 2026-03-09 17:04:00,999 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:04:01] 2026-03-09 17:04:01,001 [wrapper] pilotpid: 2838913
[2026-03-09 18:04:01] 2026-03-09 17:04:01,003 [wrapper] Pilot exit status: 0
[2026-03-09 18:04:01] 2026-03-09 17:04:01,011 [wrapper] pandaids: 7039980907
[2026-03-09 18:04:01] 2026-03-09 17:04:01,122 [wrapper] cleanup supervisor_pilot 3630855 2838914
[2026-03-09 18:04:01] 2026-03-09 17:04:01,125 [wrapper] Test setup, not cleaning
[2026-03-09 18:04:01] 2026-03-09 17:04:01,127 [wrapper] apfmon messages muted
[2026-03-09 18:04:01] 2026-03-09 17:04:01,130 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:04:01] 2026-03-09 17:04:01,132 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:04:01]  *** Error codes and diagnostics ***
[2026-03-09 18:04:01]     "exeErrorCode": 0,
[2026-03-09 18:04:01]     "exeErrorDiag": "",
[2026-03-09 18:04:01]     "pilotErrorCode": 0,
[2026-03-09 18:04:01]     "pilotErrorDiag": "",
[2026-03-09 18:04:01]  *** Listing of results directory ***
[2026-03-09 18:04:01] total 618804
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc    602657 Feb  3 12:11 pilot3.tar.gz
[2026-03-09 18:04:01] -rwx------. 1 boinc boinc     36322 Mar  8 18:53 runpilot2-wrapper.sh
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc      5111 Mar  8 18:54 queuedata.json
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc       100 Mar  9 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:04:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 16:42 run_atlas
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc       105 Mar  9 16:42 job.xml
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc      6709 Mar  9 16:42 init_data.xml
[2026-03-09 18:04:01] -rw-r--r--. 2 boinc boinc 440533432 Mar  9 16:42 EVNT.46701403._000555.pool.root.1
[2026-03-09 18:04:01] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:42 start_atlas.sh
[2026-03-09 18:04:01] drwxrwx--x. 2 boinc boinc      4096 Mar  9 16:42 shared
[2026-03-09 18:04:01] -rw-r--r--. 2 boinc boinc    616307 Mar  9 16:42 input.tar.gz
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc         0 Mar  9 16:42 boinc_lockfile
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc      2565 Mar  9 16:42 pandaJob.out
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc   1002554 Mar  9 16:42 agis_schedconf.cvmfs.json
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc   1511578 Mar  9 16:42 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc       445 Mar  9 16:42 workernode_map.json
[2026-03-09 18:04:01] drwx------. 7 boinc boinc      4096 Mar  9 16:42 pilot3
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc 187110488 Mar  9 18:02 HITS.48955006._027768.pool.root.1
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc       530 Mar  9 18:02 boinc_task_state.xml
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc      1030 Mar  9 18:02 memory_monitor_summary.json
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc    306802 Mar  9 18:02 log.48955006._027768.job.log.tgz.1
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc      6357 Mar  9 18:02 heartbeat.json
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc        95 Mar  9 18:03 pilot_heartbeat.json
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc      8192 Mar  9 18:03 boinc_mmap_file
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc        27 Mar  9 18:03 wrapper_checkpoint.txt
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc      5088 Mar  9 18:04 pilotlog.txt
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc    710819 Mar  9 18:04 log.48955006._027768.job.log.1
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc       357 Mar  9 18:04 output.list
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc       620 Mar  9 18:04 runtime_log
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc   1034240 Mar  9 18:04 result.tar.gz
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc      9221 Mar  9 18:04 runtime_log.err
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc       662 Mar  9 18:04 hh0LDmjUXJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmUNXLDmGarnKm.diag
[2026-03-09 18:04:01] -rw-r--r--. 1 boinc boinc     21688 Mar  9 18:04 stderr.txt
[2026-03-09 18:04:01] HITS file was successfully produced:
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc 187110488 Mar  9 18:02 shared/HITS.pool.root.1
[2026-03-09 18:04:01]  *** Contents of shared directory: ***
[2026-03-09 18:04:01] total 614580
[2026-03-09 18:04:01] -rw-r--r--. 2 boinc boinc 440533432 Mar  9 16:42 ATLAS.root_0
[2026-03-09 18:04:01] -rw-r--r--. 2 boinc boinc     15845 Mar  9 16:42 start_atlas.sh
[2026-03-09 18:04:01] -rw-r--r--. 2 boinc boinc    616307 Mar  9 16:42 input.tar.gz
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc 187110488 Mar  9 18:02 HITS.pool.root.1
[2026-03-09 18:04:01] -rw-------. 1 boinc boinc   1034240 Mar  9 18:04 result.tar.gz
18:04:02 (2834404): run_atlas exited; CPU time 18518.327359
18:04:02 (2834404): called boinc_finish(0)

</stderr_txt>
]]>

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