Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:29:29 (639069): wrapper (7.7.26015): starting
17:29:29 (639069): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 17:29:29] Arguments: --nthreads 4
[2026-03-09 17:29:29] Threads: 4
[2026-03-09 17:29:29] Checking for CVMFS
[2026-03-09 17:29:29] No cvmfs_config command found, will try listing directly
[2026-03-09 17:29:29] CVMFS is ok
[2026-03-09 17:29:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 17:29:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 17:29:29] Further information can be found at the LHC@home message board.
[2026-03-09 17:29:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 17:29:29] Checking for apptainer binary...
[2026-03-09 17:29:29] which: no apptainer in ((null))
[2026-03-09 17:29:29] apptainer is not installed, using version from CVMFS
[2026-03-09 17:29:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 17:29:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-09 17:29:29] apptainer works
[2026-03-09 17:29:29] Set ATHENA_PROC_NUMBER=4
[2026-03-09 17:29:29] Set ATHENA_CORE_NUMBER=4
[2026-03-09 17:29:29] Starting ATLAS job with PandaID=7039979366
[2026-03-09 17:29:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:52:56]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:52:56]  replicas=None
[2026-03-09 18:52:56]  scope=mc23_13p6TeV
[2026-03-09 18:52:56]  status=None
[2026-03-09 18:52:56]  status_code=0
[2026-03-09 18:52:56]  storage_token=
[2026-03-09 18:52:56]  surl=/var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7039979366/log.48955006._027338.job.log.tgz.1
[2026-03-09 18:52:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/cc/log.48955006._027338.job.log.tgz.1
[2026-03-09 18:52:56]  workdir=None
[2026-03-09 18:52:56] ]
[2026-03-09 18:52:56] 2026-03-09 17:51:44,836 | INFO     | transferring file log.48955006._027338.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7039979366/log.48955006._027338.job.log.tgz.1 to /var/lib/b
[2026-03-09 18:52:56] 2026-03-09 17:51:44,836 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7039979366/log.48955006._027338.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/1/lo
[2026-03-09 18:52:56] 2026-03-09 17:51:44,853 | INFO     | adding to output.list: log.48955006._027338.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/cc/log.48955006._027338.job.log.tg
[2026-03-09 18:52:56] 2026-03-09 17:51:44,854 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 18:52:56] 2026-03-09 17:51:44,854 | INFO     | summary of transferred files:
[2026-03-09 18:52:56] 2026-03-09 17:51:44,854 | INFO     |  -- lfn=log.48955006._027338.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 18:52:56] 2026-03-09 17:51:44,854 | INFO     | stage-out finished correctly
[2026-03-09 18:52:56] 2026-03-09 17:51:45,983 | INFO     | time since job start (4923s) is within the limit (349056.0s)
[2026-03-09 18:52:56] 2026-03-09 17:51:46,331 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 18:52:56] 2026-03-09 17:51:47,969 | INFO     | job 7039979366 has state=finished
[2026-03-09 18:52:56] 2026-03-09 17:51:47,969 | INFO     | preparing for final server update for job 7039979366 in state='finished'
[2026-03-09 18:52:56] 2026-03-09 17:51:47,969 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7039979366/jobReport.json
[2026-03-09 18:52:56] 2026-03-09 17:51:47,970 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/1/workernode_map.json
[2026-03-09 18:52:56] 2026-03-09 17:51:47,971 | INFO     | this job has now completed (state=finished)
[2026-03-09 18:52:56] 2026-03-09 17:51:47,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 18:52:56] 2026-03-09 17:51:47,971 | INFO     | log transfer has been attempted: DONE
[2026-03-09 18:52:56] 2026-03-09 17:51:47,971 | INFO     | job 7039979366 has finished - writing final server update
[2026-03-09 18:52:56] 2026-03-09 17:51:47,971 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3827266/.job.ad'
[2026-03-09 18:52:56] 2026-03-09 17:51:47,971 | INFO     | total number of processed events: 400 (read)
[2026-03-09 18:52:56] 2026-03-09 17:51:47,989 | INFO     | time since job start (4925s) is within the limit (349056.0s)
[2026-03-09 18:52:56] 2026-03-09 17:51:47,989 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7039979366/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:52:56] 2026-03-09 17:51:47,993 | INFO     | extracted standard info from prmon json
[2026-03-09 18:52:56] 2026-03-09 17:51:47,993 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 18:52:56] 2026-03-09 17:51:47,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 18:52:56] 2026-03-09 17:51:47,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 18:52:56] 2026-03-09 17:51:47,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:52:56] 2026-03-09 17:51:47,994 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:52:56] 2026-03-09 17:51:47,994 | INFO     | sum of square deviations: 125630262.5
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | sum of deviations: -185814478.99999997
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | mean x: 1773076333.5
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | mean y: 2330271.5135135134
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | intersect: 2624813489.969996
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | chi2: 0.00017515970507667224
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | current memory leak: -1.48 B/s (using 74 data points, chi2=0.00)
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | could have reported an average CPU frequency of 3589 MHz (6 samples)
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | ..............................
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . Timing measurements:
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . get job = 0 s
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . initial setup = 5 s
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . payload setup = 5 s
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . stage-in = 0 s
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . payload execution = 4902 s
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . stage-out = 0 s
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | . log creation = 0 s
[2026-03-09 18:52:56] 2026-03-09 17:51:47,995 | INFO     | ..............................
[2026-03-09 18:52:56] 2026-03-09 17:51:48,190 | WARNING  | process 649415 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 18:52:56] 2026-03-09 17:51:48,190 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7039979366/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:52:56] 2026-03-09 17:51:48,190 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7039979366/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:52:56] 2026-03-09 17:51:48,191 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-09 18:52:56] 2026-03-09 17:51:48,191 | WARNING  | maxPSS not found in memory monitor output
[2026-03-09 18:52:56] 2026-03-09 17:51:48,276 | INFO     | 
[2026-03-09 18:52:56] 2026-03-09 17:51:48,283 | INFO     | job summary report
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | --------------------------------------------------
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | PanDA job id: 7039979366
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | task id: 48955006
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | errors: (none)
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | pilot state: finished 
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | transexitcode: 0
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | exeerrorcode: 0
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | exeerrordiag: 
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | exitcode: 0
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | exitmsg: OK
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | cpuconsumptiontime: 18675 s
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | nevents: 400
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | neventsw: 0
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | pid: 649415
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | pgrp: 649415
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | corecount: 4
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | event service: False
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | sizes: {0: 2279979, 1: 2280241, 11: 2280269, 4911: 2306637, 4912: 2315657, 4913: 2315713, 4915: 2316035}
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | --------------------------------------------------
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | 
[2026-03-09 18:52:56] 2026-03-09 17:51:48,284 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/1
[2026-03-09 18:52:56] 2026-03-09 17:51:48,309 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | job 7039979366 has completed (purged errors)
[2026-03-09 18:52:56] 2026-03-09 17:51:48,310 | INFO     | overall cleanup function is called
[2026-03-09 18:52:56] 2026-03-09 17:51:48,715 | INFO     | number of running child processes to parent process 649415: 1
[2026-03-09 18:52:56] 2026-03-09 17:51:48,715 | INFO     | maximum number of monitored processes: 6
[2026-03-09 18:52:56] 2026-03-09 17:51:48,715 | INFO     | aborting job monitoring since job object (job id=7039979366) has expired
[2026-03-09 18:52:56] 2026-03-09 17:51:49,317 | INFO     | --- collectZombieJob: --- 10, [649415]
[2026-03-09 18:52:56] 2026-03-09 17:51:49,318 | INFO     | zombie collector waiting for pid 649415
[2026-03-09 18:52:56] 2026-03-09 17:51:49,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:52:56] 2026-03-09 17:51:49,318 | INFO     | collected zombie processes
[2026-03-09 18:52:56] 2026-03-09 17:51:49,318 | INFO     | will attempt to kill all subprocesses of pid=649415
[2026-03-09 18:52:56] 2026-03-09 17:51:49,915 | INFO     | process IDs to be killed: [649415] (in reverse order)
[2026-03-09 18:52:56] 2026-03-09 17:51:50,159 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:52:56] 2026-03-09 17:51:50,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:52:56] 2026-03-09 17:51:50,184 | INFO     | did not find any defunct processes belonging to 649415
[2026-03-09 18:52:56] 2026-03-09 17:51:50,210 | INFO     | did not find any defunct processes belonging to 649415
[2026-03-09 18:52:56] 2026-03-09 17:51:50,210 | INFO     | ready for new job
[2026-03-09 18:52:56] 2026-03-09 17:51:50,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:52:56] 2026-03-09 17:51:50,211 | INFO     | **************************************
[2026-03-09 18:52:56] 2026-03-09 17:51:50,212 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:52:56] 2026-03-09 17:51:50,212 | INFO     | **************************************
[2026-03-09 18:52:56] 2026-03-09 17:51:50,212 | INFO     | 
[2026-03-09 18:52:56] 2026-03-09 17:51:50,218 | INFO     | architecture information:
[2026-03-09 18:52:56] 2026-03-09 17:51:50,219 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:52:56] 2026-03-09 17:51:50,234 | INFO     | cat /etc/os-release:
[2026-03-09 18:52:56] NAME="CentOS Linux"
[2026-03-09 18:52:56] VERSION="7 (Core)"
[2026-03-09 18:52:56] ID="centos"
[2026-03-09 18:52:56] ID_LIKE="rhel fedora"
[2026-03-09 18:52:56] VERSION_ID="7"
[2026-03-09 18:52:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:52:56] ANSI_COLOR="0;31"
[2026-03-09 18:52:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:52:56] HOME_URL="https://www.centos.org/"
[2026-03-09 18:52:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:52:56] 
[2026-03-09 18:52:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:52:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:52:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:52:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:52:56] 
[2026-03-09 18:52:56] 2026-03-09 17:51:50,235 | INFO     | **************************************
[2026-03-09 18:52:56] 2026-03-09 17:51:50,737 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/1
[2026-03-09 18:52:56] 2026-03-09 17:51:50,753 | INFO     | sufficient remaining disk space (21601714176 B)
[2026-03-09 18:52:56] 2026-03-09 17:51:50,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:52:56] 2026-03-09 17:51:50,753 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:52:56] 2026-03-09 17:51:50,753 | INFO     | update_server=False
[2026-03-09 18:52:56] 2026-03-09 17:51:50,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:52:56] 2026-03-09 17:51:50,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:52:56] 2026-03-09 17:51:51,053 | INFO     | all data control threads have been joined
[2026-03-09 18:52:56] 2026-03-09 17:51:51,217 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 18:52:56] 2026-03-09 17:51:51,218 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 18:52:56] 2026-03-09 17:51:51,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:52:56] 2026-03-09 17:51:51,218 | INFO     | will abort loop
[2026-03-09 18:52:56] 2026-03-09 17:51:51,565 | INFO     | all payload control threads have been joined
[2026-03-09 18:52:56] 2026-03-09 17:51:51,610 | INFO     | all job control threads have been joined
[2026-03-09 18:52:56] 2026-03-09 17:51:51,758 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:51,799 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,059 | INFO     | [data] control thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,223 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:52:56] 2026-03-09 17:51:52,473 | INFO     | [job] validate thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,493 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,571 | INFO     | [payload] control thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,616 | INFO     | [job] control thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,617 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,712 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,759 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,852 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:52,961 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:53,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:52:56] 2026-03-09 17:51:54,068 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:51:56,402 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:52:01,377 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:52:56] 2026-03-09 17:52:02,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:52:56] 2026-03-09 17:52:21,563 | INFO     | PID=643593 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 18:52:56] 2026-03-09 17:52:21,564 | INFO     | .. there are 61 such processes running
[2026-03-09 18:52:56] 2026-03-09 17:52:21,567 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:52:56] 2026-03-09 17:52:21,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:52:56] 2026-03-09 17:52:21,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:52:56] 2026-03-09 17:52:50,047 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:52:56] 2026-03-09 17:52:50,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23323183490880)>', '<ExcThread(monitor, started 23322876172032)>']
[2026-03-09 18:52:56] 2026-03-09 17:52:51,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:52:56] 2026-03-09 17:52:51,718 | INFO     | [monitor] control thread has ended
[2026-03-09 18:52:56] 2026-03-09 17:52:55,938 | INFO     | all workflow threads have been joined
[2026-03-09 18:52:56] 2026-03-09 17:52:55,938 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:52:56] 2026-03-09 17:52:55,938 | INFO     | traces error code: 0
[2026-03-09 18:52:56] 2026-03-09 17:52:55,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:52:56] 2026-03-09 17:52:56,069 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:52:56] 2026-03-09 17:52:56,072 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:52:56] 2026-03-09 17:52:56,075 [wrapper] pilotpid: 643593
[2026-03-09 18:52:56] 2026-03-09 17:52:56,078 [wrapper] Pilot exit status: 0
[2026-03-09 18:52:56] 2026-03-09 17:52:56,100 [wrapper] pandaids: 7039979366
[2026-03-09 18:52:56] 2026-03-09 17:52:56,207 [wrapper] cleanup supervisor_pilot 1471170 643594
[2026-03-09 18:52:56] 2026-03-09 17:52:56,210 [wrapper] Test setup, not cleaning
[2026-03-09 18:52:56] 2026-03-09 17:52:56,212 [wrapper] apfmon messages muted
[2026-03-09 18:52:56] 2026-03-09 17:52:56,214 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:52:56] 2026-03-09 17:52:56,216 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:52:56]  *** Error codes and diagnostics ***
[2026-03-09 18:52:56]     "exeErrorCode": 0,
[2026-03-09 18:52:56]     "exeErrorDiag": "",
[2026-03-09 18:52:56]     "pilotErrorCode": 0,
[2026-03-09 18:52:56]     "pilotErrorDiag": "",
[2026-03-09 18:52:56]  *** Listing of results directory ***
[2026-03-09 18:52:56] total 616620
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc    584627 Mar  8 16:35 pilot3.tar.gz
[2026-03-09 18:52:56] -rwx------. 1 boinc boinc     36322 Mar  8 16:38 runpilot2-wrapper.sh
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc      5111 Mar  8 16:40 queuedata.json
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc       100 Mar  9 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:52:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 17:29 run_atlas
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc       105 Mar  9 17:29 job.xml
[2026-03-09 18:52:56] -rw-r--r--. 2 boinc boinc    597955 Mar  9 17:29 input.tar.gz
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc      6707 Mar  9 17:29 init_data.xml
[2026-03-09 18:52:56] -rw-r--r--. 2 boinc boinc 436664695 Mar  9 17:29 EVNT.46701403._000547.pool.root.1
[2026-03-09 18:52:56] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:29 start_atlas.sh
[2026-03-09 18:52:56] drwxrwx--x. 2 boinc boinc      4096 Mar  9 17:29 shared
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc         0 Mar  9 17:29 boinc_lockfile
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc      2564 Mar  9 17:29 pandaJob.out
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc   1002608 Mar  9 17:29 agis_schedconf.cvmfs.json
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc   1511578 Mar  9 17:29 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc       443 Mar  9 17:29 workernode_map.json
[2026-03-09 18:52:56] drwx------. 5 boinc boinc      4096 Mar  9 17:29 pilot3
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc 188827197 Mar  9 18:51 HITS.48955006._027338.pool.root.1
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc       530 Mar  9 18:51 boinc_task_state.xml
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc      1031 Mar  9 18:51 memory_monitor_summary.json
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc    276907 Mar  9 18:51 log.48955006._027338.job.log.tgz.1
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc      6355 Mar  9 18:51 heartbeat.json
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc        95 Mar  9 18:52 pilot_heartbeat.json
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc      8192 Mar  9 18:52 boinc_mmap_file
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc        27 Mar  9 18:52 wrapper_checkpoint.txt
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc      5086 Mar  9 18:52 pilotlog.txt
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc    720875 Mar  9 18:52 log.48955006._027338.job.log.1
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc       357 Mar  9 18:52 output.list
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc       620 Mar  9 18:52 runtime_log
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc   1013760 Mar  9 18:52 result.tar.gz
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc      9204 Mar  9 18:52 runtime_log.err
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc       662 Mar  9 18:52 nOlLDmKOVJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDme9WLDm1cai2n.diag
[2026-03-09 18:52:56] -rw-r--r--. 1 boinc boinc     21789 Mar  9 18:52 stderr.txt
[2026-03-09 18:52:56] HITS file was successfully produced:
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc 188827197 Mar  9 18:51 shared/HITS.pool.root.1
[2026-03-09 18:52:56]  *** Contents of shared directory: ***
[2026-03-09 18:52:56] total 612436
[2026-03-09 18:52:56] -rw-r--r--. 2 boinc boinc    597955 Mar  9 17:29 input.tar.gz
[2026-03-09 18:52:56] -rw-r--r--. 2 boinc boinc 436664695 Mar  9 17:29 ATLAS.root_0
[2026-03-09 18:52:56] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:29 start_atlas.sh
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc 188827197 Mar  9 18:51 HITS.pool.root.1
[2026-03-09 18:52:56] -rw-------. 1 boinc boinc   1013760 Mar  9 18:52 result.tar.gz
18:52:58 (639069): run_atlas exited; CPU time 18874.215602
18:52:58 (639069): called boinc_finish(0)

</stderr_txt>
]]>

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