Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-09 00:11:50 (106584): vboxwrapper version 26210
2026-03-09 00:11:50 (106584): BOINC client version: 8.2.8
2026-03-09 00:11:55 (106584): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-09 00:11:55 (106584): Successfully copied 'init_data.xml' to the shared directory.
2026-03-09 00:11:55 (106584): Create VM. (boinc_1a56cc6e7e9abc8a, slot#0)
2026-03-09 00:11:56 (106584): Setting Memory Size for VM. (4400MB)
2026-03-09 00:11:56 (106584): Setting CPU Count for VM. (4)
2026-03-09 00:11:56 (106584): Setting Chipset Options for VM.
2026-03-09 00:11:57 (106584): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-09 00:11:57 (106584): Setting Boot Options for VM.
2026-03-09 00:11:57 (106584): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-09 00:11:58 (106584): Enabling VM Network Access.
2026-03-09 00:11:58 (106584): Disabling USB Support for VM.
2026-03-09 00:11:58 (106584): Disabling COM Port Support for VM.
2026-03-09 00:11:58 (106584): Disabling LPT Port Support for VM.
2026-03-09 00:11:59 (106584): Disabling Audio Support for VM.
2026-03-09 00:11:59 (106584): Disabling Clipboard Support for VM.
2026-03-09 00:11:59 (106584): Disabling Drag and Drop Support for VM.
2026-03-09 00:12:00 (106584): Adding storage controller(s) to VM.
2026-03-09 00:12:00 (106584): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-09 00:12:02 (106584): Adding VirtualBox Guest Additions to VM.
2026-03-09 00:12:03 (106584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-09 00:12:03 (106584): forwarding host port 57463 to guest port 80
2026-03-09 00:12:04 (106584): Enabling remote desktop for VM.
2026-03-09 00:12:04 (106584): Required extension pack not installed, remote desktop not enabled.
2026-03-09 00:12:04 (106584): Enabling shared directory for VM.
2026-03-09 00:12:04 (106584): Starting VM using VBoxManage interface. (boinc_1a56cc6e7e9abc8a, slot#0)
2026-03-09 00:12:12 (106584): Successfully started VM. (PID = '129536')
2026-03-09 00:12:12 (106584): Reporting VM Process ID to BOINC.
2026-03-09 00:12:12 (106584): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-09 00:12:12 (106584): Guest Log: CPUID EDX: 0x178bfbff
2026-03-09 00:12:12 (106584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-09 00:12:12 (106584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-09 00:12:12 (106584): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-09 00:12:12 (106584): Detected: Web Application Enabled (http://localhost:57463)
2026-03-09 00:12:12 (106584): Preference change detected
2026-03-09 00:12:12 (106584): Setting CPU throttle for VM. (100%)
2026-03-09 00:12:12 (106584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-09 00:12:14 (106584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-09 00:12:14 (106584): Guest Log: BIOS: Booting from Hard Disk...
2026-03-09 00:12:17 (106584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-09 00:12:17 (106584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-09 00:12:17 (106584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-09 00:12:26 (106584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-09 00:12:26 (106584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-09 00:12:35 (106584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.000248 main     Log opened 2026-03-09T00:12:33.382429000Z
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.000364 main     OS Product: Linux
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.000406 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.000441 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.000475 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.000476 main     Process ID: 1308
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.000477 main     Package type: LINUX_64BITS_GENERIC
2026-03-09 00:12:35 (106584): Guest Log: 00:00:00.002264 main     5.2.32 r132073 started. Verbose level = 0
2026-03-09 00:12:35 (106584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-09 00:12:35 (106584): Guest Log: [INFO] Mounting shared directory
2026-03-09 00:12:35 (106584): Guest Log: [INFO] Checking for init_data.xml
2026-03-09 00:12:40 (106584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-09 00:12:40 (106584): Guest Log: [INFO] Detected branch: prod
2026-03-09 00:12:40 (106584): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-09 00:12:40 (106584): Guest Log: Copying input files
2026-03-09 00:12:41 (106584): Guest Log: Copied input files into RunAtlas.
2026-03-09 00:12:42 (106584): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-09 00:12:42 (106584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-09 00:12:42 (106584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-09 00:12:42 (106584): Guest Log: Further information can be found at the LHC@home message board.
2026-03-09 00:12:45 (106584): Guest Log: 00:00:10.005770 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 254 194 000ns (GuestNow=1 773 011 565 132 366 000 ns GuestLast=1 773 015 153 386 560 000 ns fSetTimeLastLoop=true )
2026-03-09 00:12:50 (106584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-09 00:12:50 (106584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-09 00:12:50 (106584): Guest Log: 2.6.3.0 1583 0 32176 157058 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-09 00:12:52 (106584): Guest Log: copied the webapp to /var/www
2026-03-09 00:12:52 (106584): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-09 00:12:52 (106584): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-09 00:12:53 (106584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-09 00:12:53 (106584): Guest Log:  *** Starting ATLAS job. (PandaID=7046356083 taskID=48966988) ***
2026-03-09 01:56:09 (106584): Status Report: Elapsed Time: '6000.869545'
2026-03-09 01:56:09 (106584): Status Report: CPU Time: '22455.828125'
2026-03-09 03:40:13 (106584): Status Report: Elapsed Time: '12001.366219'
2026-03-09 03:40:13 (106584): Status Report: CPU Time: '47023.421875'
2026-03-09 04:32:21 (106584): Guest Log:  *** Job finished ***
2026-03-09 04:32:21 (106584): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:31:45,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:31:45,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:14,452 | INFO     | [monitor] cgroup control has ended
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:15,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003318785856)>', '<ExcThread(monitor, started 140002436572928)>']
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:15,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:15,500 | INFO     | [monitor] control thread has ended
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,205 | INFO     | all workflow threads have been joined
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,205 | INFO     | end of generic workflow (traces error code: 0)
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,206 | INFO     | traces error code: 0
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,321 [wrapper] ==== pilot stdout END ====
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,330 [wrapper] ==== wrapper stdout RESUME ====
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,337 [wrapper] pilotpid: 5989
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,344 [wrapper] Pilot exit status: 0
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,469 [wrapper] pandaids: 7046356083
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,527 [wrapper] cleanup supervisor_pilot 28592 5990
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,539 [wrapper] Test setup, not cleaning
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,546 [wrapper] apfmon messages muted
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,552 [wrapper] ==== wrapper stdout END ====
2026-03-09 04:32:21 (106584): Guest Log: 2026-03-09 03:32:20,560 [wrapper] ==== wrapper stderr END ====
2026-03-09 04:32:21 (106584): Guest Log:  *** Error codes and diagnostics ***
2026-03-09 04:32:21 (106584): Guest Log:     "exeErrorCode": 0,
2026-03-09 04:32:21 (106584): Guest Log:     "exeErrorDiag": "",
2026-03-09 04:32:21 (106584): Guest Log:     "pilotErrorCode": 0,
2026-03-09 04:32:21 (106584): Guest Log:     "pilotErrorDiag": "",
2026-03-09 04:32:21 (106584): Guest Log:  *** Listing of results directory ***
2026-03-09 04:32:21 (106584): Guest Log: total 208432
2026-03-09 04:32:21 (106584): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  8 14:46 pilot3.tar.gz
2026-03-09 04:32:21 (106584): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  8 14:48 runpilot2-wrapper.sh
2026-03-09 04:32:21 (106584): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  8 14:49 queuedata.json
2026-03-09 04:32:21 (106584): Guest Log: -rwxr-xr-x. 1 atlas atlas      5850 Mar  8 23:12 init_data.xml
2026-03-09 04:32:21 (106584): Guest Log: -rwxr-xr-x. 1 atlas atlas    597970 Mar  8 23:12 input.tar.gz
2026-03-09 04:32:21 (106584): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  8 23:12 start_atlas.sh
2026-03-09 04:32:21 (106584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  8 23:12 EVNT.48966985._000643.pool.root.1 -> /data/./ATLAS.root_0
2026-03-09 04:32:21 (106584): Guest Log: -rw-r--r--. 1 atlas atlas      2592 Mar  8 23:12 pandaJob.out
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas    999108 Mar  8 23:13 agis_schedconf.cvmfs.json
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas       427 Mar  8 23:13 workernode_map.json
2026-03-09 04:32:21 (106584): Guest Log: drwx------. 5 atlas atlas      4096 Mar  8 23:13 pilot3
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas 204476030 Mar  9 03:30 HITS.48966988._016497.pool.root.1
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas        95 Mar  9 03:30 pilot_heartbeat.json
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas      1034 Mar  9 03:31 memory_monitor_summary.json
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar  9 03:31 agis_ddmendpoints.agis.ALL.json
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas    409118 Mar  9 03:31 log.48966988._016497.job.log.tgz.1
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas      6378 Mar  9 03:31 heartbeat.json
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas      4873 Mar  9 03:32 pilotlog.txt
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas   2145782 Mar  9 03:32 log.48966988._016497.job.log.1
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas       357 Mar  9 03:32 output.list
2026-03-09 04:32:21 (106584): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  9 03:32 runtime_log
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas   2570240 Mar  9 03:32 result.tar.gz
2026-03-09 04:32:21 (106584): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Mar  9 03:32 runtime_log.err
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas       661 Mar  9 03:32 oKYLDm4bUJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkVZLDmx6m0Fn.diag
2026-03-09 04:32:21 (106584): Guest Log: Looking for outputfile HITS.48966988._016497.pool.root.1
2026-03-09 04:32:21 (106584): Guest Log: HITS file was successfully produced
2026-03-09 04:32:21 (106584): Guest Log: -rw-------. 1 atlas atlas 204476030 Mar  9 03:30 /home/atlas/RunAtlas/HITS.48966988._016497.pool.root.1
2026-03-09 04:32:26 (106584): Guest Log: Successfully finished the ATLAS job!
2026-03-09 04:32:26 (106584): Guest Log: Copying the results back to the shared directory!
2026-03-09 04:32:26 (106584): Guest Log:  *** Contents of shared directory: ***
2026-03-09 04:32:27 (106584): Guest Log: total 409200
2026-03-09 04:32:27 (106584): Guest Log: -rwxrwxrwx. 1 root root 211348890 Mar  8 23:11 ATLAS.root_0
2026-03-09 04:32:27 (106584): Guest Log: -rwxrwxrwx. 1 root root 204476030 Mar  9 03:32 HITS.pool.root.1
2026-03-09 04:32:27 (106584): Guest Log: -rwxrwxrwx. 1 root root      5850 Mar  8 23:11 init_data.xml
2026-03-09 04:32:27 (106584): Guest Log: -rwxrwxrwx. 1 root root    597970 Mar  8 19:44 input.tar.gz
2026-03-09 04:32:27 (106584): Guest Log: -rwxrwxrwx. 1 root root   2570240 Mar  9 03:32 result.tar.gz
2026-03-09 04:32:27 (106584): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  8 19:44 start_atlas.sh
2026-03-09 04:32:27 (106584): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-09 04:32:27 (106584): VM Completion File Detected.
2026-03-09 04:32:27 (106584): Powering off VM.
2026-03-09 04:32:29 (106584): Successfully stopped VM.
2026-03-09 04:32:29 (106584): Deregistering VM. (boinc_1a56cc6e7e9abc8a, slot#0)
2026-03-09 04:32:29 (106584): Removing network bandwidth throttle group from VM.
2026-03-09 04:32:30 (106584): Removing VM from VirtualBox.
2026-03-09 04:32:35 (106584): called boinc_finish(0)

</stderr_txt>
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