Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:27 (4246): wrapper (7.7.26015): starting
04:32:27 (4246): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 04:32:27] Arguments: --nthreads 8
[2026-03-09 04:32:27] Threads: 8
[2026-03-09 04:32:27] Checking for CVMFS
[2026-03-09 04:32:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 04:32:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 04:32:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 04:32:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 04:32:30] 2.11.2.0 898 119822 130864 157063 2 94 17302080 25165824 1085 130560 154 38634418 99.822 32773443 1162 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-09 04:32:30] CVMFS is ok
[2026-03-09 04:32:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 04:32:30] Checking for apptainer binary...
[2026-03-09 04:32:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 04:32:30] Running /usr/bin/apptainer --version
[2026-03-09 04:32:30] apptainer version 1.3.2-1.el7
[2026-03-09 04:32:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 04:33:03] cg-vwn390.simple-grid.lan
[2026-03-09 04:33:03] apptainer works
[2026-03-09 04:33:03] Set ATHENA_PROC_NUMBER=8
[2026-03-09 04:33:03] Set ATHENA_CORE_NUMBER=8
[2026-03-09 04:33:03] Starting ATLAS job with PandaID=7033279460
[2026-03-09 04:33:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 09:30:37]  *** The last 200 lines of the pilot log: ***
[2026-03-09 09:30:38] 2026-03-09 08:29:59,266 | INFO     | extracted standard info from prmon json
[2026-03-09 09:30:38] 2026-03-09 08:29:59,266 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 09:30:38] 2026-03-09 08:29:59,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 09:30:38] 2026-03-09 08:29:59,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 09:30:38] 2026-03-09 08:29:59,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 09:30:38] 2026-03-09 08:29:59,272 | INFO     | fitting pss+swap vs Time
[2026-03-09 09:30:38] 2026-03-09 08:29:59,273 | INFO     | sum of square deviations: 6953769450.5
[2026-03-09 09:30:38] 2026-03-09 08:29:59,276 | INFO     | sum of deviations: 124503564195.99997
[2026-03-09 09:30:38] 2026-03-09 08:29:59,276 | INFO     | mean x: 1773036396.5
[2026-03-09 09:30:38] 2026-03-09 08:29:59,276 | INFO     | mean y: 2466893.7730496456
[2026-03-09 09:30:38] 2026-03-09 08:29:59,276 | INFO     | intersect: -31742812035.14076
[2026-03-09 09:30:38] 2026-03-09 08:29:59,277 | INFO     | chi2: 7.732099480470655
[2026-03-09 09:30:38] 2026-03-09 08:29:59,277 | INFO     | sum of square deviations: 6590404498.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,280 | INFO     | sum of deviations: 140909945161.00006
[2026-03-09 09:30:38] 2026-03-09 08:29:59,280 | INFO     | mean x: 1773036244.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,283 | INFO     | mean y: 2473664.870036101
[2026-03-09 09:30:38] 2026-03-09 08:29:59,284 | INFO     | intersect: -37906950557.31912
[2026-03-09 09:30:38] 2026-03-09 08:29:59,284 | INFO     | chi2: 7.017238853023011
[2026-03-09 09:30:38] 2026-03-09 08:29:59,284 | INFO     | current chi2=7.017238853023011 (change=9.245362520919482 %)
[2026-03-09 09:30:38] 2026-03-09 08:29:59,284 | INFO     | right removable region: 276
[2026-03-09 09:30:38] 2026-03-09 08:29:59,285 | INFO     | sum of square deviations: 6590404498.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,287 | INFO     | sum of deviations: 25356901632.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,288 | INFO     | mean x: 1773036549.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,288 | INFO     | mean y: 2508481.440433213
[2026-03-09 09:30:38] 2026-03-09 08:29:59,288 | INFO     | intersect: -6819335819.099456
[2026-03-09 09:30:38] 2026-03-09 08:29:59,288 | INFO     | chi2: 2.86958552582219
[2026-03-09 09:30:38] 2026-03-09 08:29:59,288 | INFO     | current chi2=2.86958552582219 (change=62.88736929639816 %)
[2026-03-09 09:30:38] 2026-03-09 08:29:59,289 | INFO     | sum of square deviations: 6239923508.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,291 | INFO     | sum of deviations: -35017538244.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,292 | INFO     | mean x: 1773036701.5
[2026-03-09 09:30:38] 2026-03-09 08:29:59,292 | INFO     | mean y: 2534655.463235294
[2026-03-09 09:30:38] 2026-03-09 08:29:59,292 | INFO     | intersect: 9952557347.75933
[2026-03-09 09:30:38] 2026-03-09 08:29:59,292 | INFO     | chi2: 0.9525941835045466
[2026-03-09 09:30:38] 2026-03-09 08:29:59,292 | INFO     | current chi2=0.9525941835045466 (change=66.8037709650905 %)
[2026-03-09 09:30:38] 2026-03-09 08:29:59,293 | INFO     | sum of square deviations: 5902093918.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,295 | INFO     | sum of deviations: -36975032575.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,296 | INFO     | mean x: 1773036854.0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,296 | INFO     | mean y: 2535503.3258426967
[2026-03-09 09:30:38] 2026-03-09 08:29:59,296 | INFO     | intersect: 11110135000.072027
[2026-03-09 09:30:38] 2026-03-09 08:29:59,296 | INFO     | chi2: 0.9195283394582874
[2026-03-09 09:30:38] 2026-03-09 08:29:59,297 | INFO     | current chi2=0.9195283394582874 (change=3.471136462812699 %)
[2026-03-09 09:30:38] 2026-03-09 08:29:59,297 | INFO     | left removable region: 30
[2026-03-09 09:30:38] 2026-03-09 08:29:59,297 | INFO     | sum of square deviations: 4616114457.5
[2026-03-09 09:30:38] 2026-03-09 08:29:59,299 | INFO     | sum of deviations: 8137247652.499999
[2026-03-09 09:30:38] 2026-03-09 08:29:59,300 | INFO     | mean x: 1773037128.5
[2026-03-09 09:30:38] 2026-03-09 08:29:59,300 | INFO     | mean y: 2530280.1910569104
[2026-03-09 09:30:38] 2026-03-09 08:29:59,300 | INFO     | intersect: -3122964623.480743
[2026-03-09 09:30:38] 2026-03-09 08:29:59,300 | INFO     | chi2: 0.01338050074367231
[2026-03-09 09:30:38] 2026-03-09 08:29:59,301 | INFO     | current memory leak: 1.76 B/s (using 246 data points, chi2=0.01)
[2026-03-09 09:30:38] 2026-03-09 08:29:59,301 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-09 09:30:38] 2026-03-09 08:29:59,301 | INFO     | ..............................
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . Timing measurements:
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . get job = 0 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . initial setup = 108 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . payload setup = 142 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . stage-in = 0 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . payload execution = 17311 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . stage-out = 4 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | . log creation = 1 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,302 | INFO     | ..............................
[2026-03-09 09:30:38] 2026-03-09 08:29:59,418 | INFO     | 
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | job summary report
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | --------------------------------------------------
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | PanDA job id: 7033279460
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | task id: 48838432
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | errors: (none)
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | pilot state: finished 
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | transexitcode: 0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,419 | INFO     | exeerrorcode: 0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | exeerrordiag: 
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | exitcode: 0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | exitmsg: OK
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | cpuconsumptiontime: 63643 s
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | nevents: 400
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | neventsw: 0
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | pid: 12697
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | pgrp: 12697
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | corecount: 8
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | event service: False
[2026-03-09 09:30:38] 2026-03-09 08:29:59,420 | INFO     | sizes: {0: 2279820, 1: 2280281, 17458: 2312322, 17462: 2321320, 17463: 2321376, 17464: 2321570}
[2026-03-09 09:30:38] 2026-03-09 08:29:59,421 | INFO     | --------------------------------------------------
[2026-03-09 09:30:38] 2026-03-09 08:29:59,421 | INFO     | 
[2026-03-09 09:30:38] 2026-03-09 08:29:59,421 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-09 09:30:38] 2026-03-09 08:30:00,149 | INFO     | time since job start (17467s) is within the limit (349056.0s)
[2026-03-09 09:30:38] 2026-03-09 08:30:00,159 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,159 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,159 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,159 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 09:30:38] 2026-03-09 08:30:00,161 | INFO     | job 7033279460 has completed (purged errors)
[2026-03-09 09:30:38] 2026-03-09 08:30:00,162 | INFO     | overall cleanup function is called
[2026-03-09 09:30:38] 2026-03-09 08:30:01,170 | INFO     | --- collectZombieJob: --- 10, [12697]
[2026-03-09 09:30:38] 2026-03-09 08:30:01,171 | INFO     | zombie collector waiting for pid 12697
[2026-03-09 09:30:38] 2026-03-09 08:30:01,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 09:30:38] 2026-03-09 08:30:01,171 | INFO     | collected zombie processes
[2026-03-09 09:30:38] 2026-03-09 08:30:01,171 | INFO     | will attempt to kill all subprocesses of pid=12697
[2026-03-09 09:30:38] 2026-03-09 08:30:01,269 | INFO     | process IDs to be killed: [12697] (in reverse order)
[2026-03-09 09:30:38] 2026-03-09 08:30:02,289 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 09:30:38] 2026-03-09 08:30:02,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 09:30:38] 2026-03-09 08:30:02,291 | INFO     | did not find any defunct processes belonging to 12697
[2026-03-09 09:30:38] 2026-03-09 08:30:02,293 | INFO     | did not find any defunct processes belonging to 12697
[2026-03-09 09:30:38] 2026-03-09 08:30:02,293 | INFO     | ready for new job
[2026-03-09 09:30:38] 2026-03-09 08:30:02,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 09:30:38] 2026-03-09 08:30:02,296 | INFO     | **************************************
[2026-03-09 09:30:38] 2026-03-09 08:30:02,296 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 09:30:38] 2026-03-09 08:30:02,296 | INFO     | **************************************
[2026-03-09 09:30:38] 2026-03-09 08:30:02,296 | INFO     | 
[2026-03-09 09:30:38] 2026-03-09 08:30:02,297 | INFO     | pilot is running in a VM
[2026-03-09 09:30:38] 2026-03-09 08:30:02,297 | INFO     | architecture information:
[2026-03-09 09:30:38] 2026-03-09 08:30:02,303 | INFO     | executing command: cat /etc/os-release
[2026-03-09 09:30:38] 2026-03-09 08:30:02,539 | INFO     | cat /etc/os-release:
[2026-03-09 09:30:38] NAME="CentOS Linux"
[2026-03-09 09:30:38] VERSION="7 (Core)"
[2026-03-09 09:30:38] ID="centos"
[2026-03-09 09:30:38] ID_LIKE="rhel fedora"
[2026-03-09 09:30:38] VERSION_ID="7"
[2026-03-09 09:30:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 09:30:38] ANSI_COLOR="0;31"
[2026-03-09 09:30:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 09:30:38] HOME_URL="https://www.centos.org/"
[2026-03-09 09:30:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 09:30:38] 
[2026-03-09 09:30:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 09:30:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 09:30:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 09:30:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 09:30:38] 
[2026-03-09 09:30:38] 2026-03-09 08:30:02,539 | INFO     | **************************************
[2026-03-09 09:30:38] 2026-03-09 08:30:03,043 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-09 09:30:38] 2026-03-09 08:30:03,288 | INFO     | sufficient remaining disk space (494733885440 B)
[2026-03-09 09:30:38] 2026-03-09 08:30:03,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 09:30:38] 2026-03-09 08:30:03,289 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 09:30:38] 2026-03-09 08:30:03,289 | INFO     | update_server=False
[2026-03-09 09:30:38] 2026-03-09 08:30:03,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 09:30:38] 2026-03-09 08:30:03,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 09:30:38] 2026-03-09 08:30:03,721 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 09:30:38] 2026-03-09 08:30:03,722 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 09:30:38] 2026-03-09 08:30:03,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:30:38] 2026-03-09 08:30:03,722 | INFO     | will abort loop
[2026-03-09 09:30:38] 2026-03-09 08:30:04,295 | INFO     | [job] retrieve thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:04,346 | INFO     | all payload control threads have been joined
[2026-03-09 09:30:38] 2026-03-09 08:30:04,389 | INFO     | all data control threads have been joined
[2026-03-09 09:30:38] 2026-03-09 08:30:04,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:30:38] 2026-03-09 08:30:04,448 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:04,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 09:30:38] 2026-03-09 08:30:04,599 | INFO     | all job control threads have been joined
[2026-03-09 09:30:38] 2026-03-09 08:30:04,601 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:04,727 | INFO     | [job] job monitor thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:04,808 | INFO     | [job] validate thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:04,858 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:04,885 | INFO     | [data] copytool_in thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:04,940 | INFO     | [payload] failed_post thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:05,095 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:05,295 | INFO     | [data] copytool_out thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:05,314 | INFO     | [payload] validate_post thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:05,352 | INFO     | [payload] control thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:05,394 | INFO     | [data] control thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:05,446 | INFO     | [job] queue monitor thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:05,605 | INFO     | [job] control thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:08,500 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 09:30:38] 2026-03-09 08:30:23,087 | INFO     | [monitor] cgroup control has ended
[2026-03-09 09:30:38] 2026-03-09 08:30:24,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698843457344)>', '<ExcThread(monitor, started 139698550851328)>']
[2026-03-09 09:30:38] 2026-03-09 08:30:29,803 | INFO     | all workflow threads have been joined
[2026-03-09 09:30:38] 2026-03-09 08:30:29,804 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 09:30:38] 2026-03-09 08:30:29,804 | INFO     | traces error code: 0
[2026-03-09 09:30:38] 2026-03-09 08:30:29,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 09:30:38] 2026-03-09 08:30:33,264 | INFO     | PID=8238 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-09 09:30:38] 2026-03-09 08:30:33,264 | INFO     | .. there are 2 such processes running
[2026-03-09 09:30:38] 2026-03-09 08:30:33,265 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 09:30:38] 2026-03-09 08:30:33,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 09:30:38] 2026-03-09 08:30:33,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 09:30:38] 2026-03-09 08:30:33,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 09:30:38] 2026-03-09 08:30:33,265 | CRITICAL | thread 'MainThread' is not alive
[2026-03-09 09:30:38] 2026-03-09 08:30:33,269 | INFO     | [monitor] control thread has ended
[2026-03-09 09:30:38] 2026-03-09 08:30:33,476 [wrapper] ==== pilot stdout END ====
[2026-03-09 09:30:38] 2026-03-09 08:30:33,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 09:30:38] 2026-03-09 08:30:33,563 [wrapper] pilotpid: 8238
[2026-03-09 09:30:38] 2026-03-09 08:30:33,623 [wrapper] Pilot exit status: 0
[2026-03-09 09:30:38] 2026-03-09 08:30:33,728 [wrapper] pandaids: 7033279460
[2026-03-09 09:30:38] 2026-03-09 08:30:34,676 [wrapper] cleanup supervisor_pilot 20038 8239
[2026-03-09 09:30:38] 2026-03-09 08:30:34,779 [wrapper] Test setup, not cleaning
[2026-03-09 09:30:38] 2026-03-09 08:30:34,877 [wrapper] apfmon messages muted
[2026-03-09 09:30:38] 2026-03-09 08:30:34,972 [wrapper] ==== wrapper stdout END ====
[2026-03-09 09:30:38] 2026-03-09 08:30:35,037 [wrapper] ==== wrapper stderr END ====
[2026-03-09 09:30:38]  *** Error codes and diagnostics ***
[2026-03-09 09:30:38]     "exeErrorCode": 0,
[2026-03-09 09:30:38]     "exeErrorDiag": "",
[2026-03-09 09:30:38]     "pilotErrorCode": 0,
[2026-03-09 09:30:38]     "pilotErrorDiag": "",
[2026-03-09 09:30:38]  *** Listing of results directory ***
[2026-03-09 09:30:38] total 505152
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc    584627 Feb 28 14:52 pilot3.tar.gz
[2026-03-09 09:30:38] -rwx------. 1 boinc boinc     36322 Feb 28 14:52 runpilot2-wrapper.sh
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc      5111 Feb 28 14:53 queuedata.json
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc       100 Mar  9 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 09:30:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 04:32 run_atlas
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc       105 Mar  9 04:32 job.xml
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc      6391 Mar  9 04:32 init_data.xml
[2026-03-09 09:30:38] -rw-r--r--. 2 boinc boinc 287630238 Mar  9 04:32 EVNT.48220101._000156.pool.root.1
[2026-03-09 09:30:38] -rw-r--r--. 2 boinc boinc     15845 Mar  9 04:32 start_atlas.sh
[2026-03-09 09:30:38] drwxrwx--x. 2 boinc boinc        68 Mar  9 04:32 shared
[2026-03-09 09:30:38] -rw-r--r--. 2 boinc boinc    597975 Mar  9 04:32 input.tar.gz
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc         0 Mar  9 04:32 boinc_lockfile
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc      2580 Mar  9 04:33 pandaJob.out
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc       415 Mar  9 04:38 workernode_map.json
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc    999108 Mar  9 04:38 agis_schedconf.cvmfs.json
[2026-03-09 09:30:38] drwx------. 5 boinc boinc      4096 Mar  9 04:38 pilot3
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc 219846627 Mar  9 09:28 HITS.48838432._004071.pool.root.1
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc       530 Mar  9 09:28 boinc_task_state.xml
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc      1010 Mar  9 09:29 memory_monitor_summary.json
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc   1511578 Mar  9 09:29 agis_ddmendpoints.agis.ALL.json
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc    497943 Mar  9 09:29 log.48838432._004071.job.log.tgz.1
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc        95 Mar  9 09:29 pilot_heartbeat.json
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc      6313 Mar  9 09:29 heartbeat.json
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc      8192 Mar  9 09:30 boinc_mmap_file
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc        28 Mar  9 09:30 wrapper_checkpoint.txt
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc       889 Mar  9 09:30 pilotlog.txt
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc   2445431 Mar  9 09:30 log.48838432._004071.job.log.1
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc       357 Mar  9 09:30 output.list
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc       620 Mar  9 09:30 runtime_log
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc   2959360 Mar  9 09:30 result.tar.gz
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc       655 Mar  9 09:30 xwALDmdvZG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2N7KDmVLxoWn.diag
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc      8816 Mar  9 09:30 runtime_log.err
[2026-03-09 09:30:38] -rw-r--r--. 1 boinc boinc     20570 Mar  9 09:30 stderr.txt
[2026-03-09 09:30:38] HITS file was successfully produced:
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc 219846627 Mar  9 09:28 shared/HITS.pool.root.1
[2026-03-09 09:30:38]  *** Contents of shared directory: ***
[2026-03-09 09:30:38] total 499080
[2026-03-09 09:30:38] -rw-r--r--. 2 boinc boinc 287630238 Mar  9 04:32 ATLAS.root_0
[2026-03-09 09:30:38] -rw-r--r--. 2 boinc boinc     15845 Mar  9 04:32 start_atlas.sh
[2026-03-09 09:30:38] -rw-r--r--. 2 boinc boinc    597975 Mar  9 04:32 input.tar.gz
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc 219846627 Mar  9 09:28 HITS.pool.root.1
[2026-03-09 09:30:38] -rw-------. 1 boinc boinc   2959360 Mar  9 09:30 result.tar.gz
09:30:39 (4246): run_atlas exited; CPU time 63829.746638
09:30:39 (4246): called boinc_finish(0)

</stderr_txt>
]]>

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