Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:29:36 (214268): wrapper (7.7.26015): starting
17:29:36 (214268): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 17:29:36] Arguments: --nthreads 8
[2026-03-08 17:29:36] Threads: 8
[2026-03-08 17:29:36] Checking for CVMFS
[2026-03-08 17:29:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 17:29:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 17:29:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 17:29:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 17:29:38] 2.13.3.0 1513861 46139 392368 157053 1 335 21225792 32935936 26680 16776704 0 154583587 99.428 223542583 30920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-08 17:29:38] CVMFS is ok
[2026-03-08 17:29:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 17:29:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 17:29:38] Further information can be found at the LHC@home message board.
[2026-03-08 17:29:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 17:29:38] Checking for apptainer binary...
[2026-03-08 17:29:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 17:29:38] Running /usr/bin/apptainer --version
[2026-03-08 17:29:38] apptainer version 1.4.5-2.el9
[2026-03-08 17:29:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 17:29:39] c6-12-29-4.aglt2.org
[2026-03-08 17:29:39] apptainer works
[2026-03-08 17:29:39] Set ATHENA_PROC_NUMBER=8
[2026-03-08 17:29:39] Set ATHENA_CORE_NUMBER=8
[2026-03-08 17:29:39] Starting ATLAS job with PandaID=7033278289
[2026-03-08 17:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 21:08:20]  *** The last 200 lines of the pilot log: ***
[2026-03-08 21:08:20] 2026-03-09 01:07:23,779 | INFO     | job 7033278289 has state=finished
[2026-03-08 21:08:20] 2026-03-09 01:07:23,779 | INFO     | preparing for final server update for job 7033278289 in state='finished'
[2026-03-08 21:08:20] 2026-03-09 01:07:23,780 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7033278289/jobReport.json
[2026-03-08 21:08:20] 2026-03-09 01:07:23,791 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-08 21:08:20] 2026-03-09 01:07:23,791 | INFO     | this job has now completed (state=finished)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,791 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,791 | INFO     | log transfer has been attempted: DONE
[2026-03-08 21:08:20] 2026-03-09 01:07:23,791 | INFO     | job 7033278289 has finished - writing final server update
[2026-03-08 21:08:20] 2026-03-09 01:07:23,792 | INFO     | total number of processed events: 400 (read)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,847 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7033278289/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,852 | INFO     | extracted standard info from prmon json
[2026-03-08 21:08:20] 2026-03-09 01:07:23,852 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 21:08:20] 2026-03-09 01:07:23,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 21:08:20] 2026-03-09 01:07:23,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 21:08:20] 2026-03-09 01:07:23,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 21:08:20] 2026-03-09 01:07:23,862 | INFO     | fitting pss+swap vs Time
[2026-03-08 21:08:20] 2026-03-09 01:07:23,862 | INFO     | sum of square deviations: 2912961108.1516604
[2026-03-08 21:08:20] 2026-03-09 01:07:23,864 | INFO     | sum of deviations: 24629828463.099525
[2026-03-08 21:08:20] 2026-03-09 01:07:23,864 | INFO     | mean x: 1773011966.2369668
[2026-03-08 21:08:20] 2026-03-09 01:07:23,864 | INFO     | mean y: 2447812.218009479
[2026-03-08 21:08:20] 2026-03-09 01:07:23,864 | INFO     | intersect: -14988820169.093369
[2026-03-08 21:08:20] 2026-03-09 01:07:23,864 | INFO     | chi2: 4.372746999752394
[2026-03-08 21:08:20] 2026-03-09 01:07:23,865 | INFO     | sum of square deviations: 2710755287.844667
[2026-03-08 21:08:20] 2026-03-09 01:07:23,870 | INFO     | sum of deviations: 38041961634.446625
[2026-03-08 21:08:20] 2026-03-09 01:07:23,870 | INFO     | mean x: 1773011813.737864
[2026-03-08 21:08:20] 2026-03-09 01:07:23,871 | INFO     | mean y: 2457725.8786407765
[2026-03-08 21:08:20] 2026-03-09 01:07:23,871 | INFO     | intersect: -24879481155.910027
[2026-03-08 21:08:20] 2026-03-09 01:07:23,871 | INFO     | chi2: 3.61672854520097
[2026-03-08 21:08:20] 2026-03-09 01:07:23,871 | INFO     | current chi2=3.61672854520097 (change=17.289325327859892 %)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,871 | INFO     | right removable region: 205
[2026-03-08 21:08:20] 2026-03-09 01:07:23,872 | INFO     | sum of square deviations: 2710737415.364079
[2026-03-08 21:08:20] 2026-03-09 01:07:23,873 | INFO     | sum of deviations: -32707633136.048546
[2026-03-08 21:08:20] 2026-03-09 01:07:23,873 | INFO     | mean x: 1773012118.7427185
[2026-03-08 21:08:20] 2026-03-09 01:07:23,873 | INFO     | mean y: 2490929.300970874
[2026-03-08 21:08:20] 2026-03-09 01:07:23,877 | INFO     | intersect: 21395573710.731575
[2026-03-08 21:08:20] 2026-03-09 01:07:23,878 | INFO     | chi2: 1.3647112958455245
[2026-03-08 21:08:20] 2026-03-09 01:07:23,878 | INFO     | current chi2=1.3647112958455245 (change=68.79052696342136 %)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,878 | INFO     | sum of square deviations: 2518095297.5621896
[2026-03-08 21:08:20] 2026-03-09 01:07:23,879 | INFO     | sum of deviations: -46601002727.159195
[2026-03-08 21:08:20] 2026-03-09 01:07:23,880 | INFO     | mean x: 1773012271.2487562
[2026-03-08 21:08:20] 2026-03-09 01:07:23,880 | INFO     | mean y: 2501847.3631840795
[2026-03-08 21:08:20] 2026-03-09 01:07:23,880 | INFO     | intersect: 32814663391.741524
[2026-03-08 21:08:20] 2026-03-09 01:07:23,880 | INFO     | chi2: 1.0929933149046862
[2026-03-08 21:08:20] 2026-03-09 01:07:23,880 | INFO     | current chi2=1.0929933149046862 (change=19.910290313270394 %)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,880 | INFO     | left removable region: 20
[2026-03-08 21:08:20] 2026-03-09 01:07:23,881 | INFO     | sum of square deviations: 1963344948.0216293
[2026-03-08 21:08:20] 2026-03-09 01:07:23,886 | INFO     | sum of deviations: -31817665207.951374
[2026-03-08 21:08:20] 2026-03-09 01:07:23,886 | INFO     | mean x: 1773012393.264865
[2026-03-08 21:08:20] 2026-03-09 01:07:23,886 | INFO     | mean y: 2513610.345945946
[2026-03-08 21:08:20] 2026-03-09 01:07:23,886 | INFO     | intersect: 28735678811.547573
[2026-03-08 21:08:20] 2026-03-09 01:07:23,887 | INFO     | chi2: 0.26950223380814675
[2026-03-08 21:08:20] 2026-03-09 01:07:23,887 | INFO     | current memory leak: -16.21 B/s (using 185 data points, chi2=0.27)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,887 | INFO     | could have reported an average CPU frequency of 2699 MHz (11 samples)
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | ..............................
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . Timing measurements:
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . get job = 0 s
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . initial setup = 39 s
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . payload setup = 43 s
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . stage-in = 0 s
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . payload execution = 12890 s
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . stage-out = 7 s
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | . log creation = 0 s
[2026-03-08 21:08:20] 2026-03-09 01:07:23,888 | INFO     | ..............................
[2026-03-08 21:08:20] 2026-03-09 01:07:24,199 | INFO     | 
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | job summary report
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | --------------------------------------------------
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | PanDA job id: 7033278289
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | task id: 48700938
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | errors: (none)
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | pilot state: finished 
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | transexitcode: 0
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | exeerrorcode: 0
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | exeerrordiag: 
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | exitcode: 0
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | exitmsg: OK
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | cpuconsumptiontime: 33006 s
[2026-03-08 21:08:20] 2026-03-09 01:07:24,200 | INFO     | nevents: 400
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | neventsw: 0
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | pid: 229404
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | pgrp: 229404
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | corecount: 8
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | event service: False
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | sizes: {0: 2279661, 1: 2279745, 2: 2280206, 13: 2280206, 12938: 2310148, 12947: 2319146, 12951: 2319330, 12953: 2319524}
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | --------------------------------------------------
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | 
[2026-03-08 21:08:20] 2026-03-09 01:07:24,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | job 7033278289 has completed (purged errors)
[2026-03-08 21:08:20] 2026-03-09 01:07:24,374 | INFO     | overall cleanup function is called
[2026-03-08 21:08:20] 2026-03-09 01:07:24,391 | INFO     | PID=221098 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 21:08:20] 2026-03-09 01:07:24,392 | INFO     | .. there are 29 such processes running
[2026-03-08 21:08:20] 2026-03-09 01:07:25,399 | INFO     | --- collectZombieJob: --- 10, [229404]
[2026-03-08 21:08:20] 2026-03-09 01:07:25,400 | INFO     | zombie collector waiting for pid 229404
[2026-03-08 21:08:20] 2026-03-09 01:07:25,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 21:08:20] 2026-03-09 01:07:25,400 | INFO     | collected zombie processes
[2026-03-08 21:08:20] 2026-03-09 01:07:25,400 | INFO     | will attempt to kill all subprocesses of pid=229404
[2026-03-08 21:08:20] 2026-03-09 01:07:28,015 | INFO     | process IDs to be killed: [229404] (in reverse order)
[2026-03-08 21:08:20] 2026-03-09 01:07:28,668 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 21:08:20] 2026-03-09 01:07:28,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 21:08:20] 2026-03-09 01:07:28,735 | INFO     | did not find any defunct processes belonging to 229404
[2026-03-08 21:08:20] 2026-03-09 01:07:28,812 | INFO     | did not find any defunct processes belonging to 229404
[2026-03-08 21:08:20] 2026-03-09 01:07:28,813 | INFO     | ready for new job
[2026-03-08 21:08:20] 2026-03-09 01:07:28,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 21:08:20] 2026-03-09 01:07:28,831 | INFO     | **************************************
[2026-03-08 21:08:20] 2026-03-09 01:07:28,831 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 21:08:20] 2026-03-09 01:07:28,831 | INFO     | **************************************
[2026-03-08 21:08:20] 2026-03-09 01:07:28,831 | INFO     | 
[2026-03-08 21:08:20] 2026-03-09 01:07:28,845 | INFO     | architecture information:
[2026-03-08 21:08:20] 2026-03-09 01:07:28,858 | INFO     | executing command: cat /etc/os-release
[2026-03-08 21:08:20] 2026-03-09 01:07:28,938 | INFO     | cat /etc/os-release:
[2026-03-08 21:08:20] NAME="CentOS Linux"
[2026-03-08 21:08:20] VERSION="7 (Core)"
[2026-03-08 21:08:20] ID="centos"
[2026-03-08 21:08:20] ID_LIKE="rhel fedora"
[2026-03-08 21:08:20] VERSION_ID="7"
[2026-03-08 21:08:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 21:08:20] ANSI_COLOR="0;31"
[2026-03-08 21:08:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 21:08:20] HOME_URL="https://www.centos.org/"
[2026-03-08 21:08:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 21:08:20] 
[2026-03-08 21:08:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 21:08:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 21:08:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 21:08:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 21:08:20] 
[2026-03-08 21:08:20] 2026-03-09 01:07:28,939 | INFO     | **************************************
[2026-03-08 21:08:20] 2026-03-09 01:07:29,443 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-08 21:08:20] 2026-03-09 01:07:29,489 | INFO     | sufficient remaining disk space (93816094720 B)
[2026-03-08 21:08:20] 2026-03-09 01:07:29,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 21:08:20] 2026-03-09 01:07:29,489 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 21:08:20] 2026-03-09 01:07:29,489 | INFO     | update_server=False
[2026-03-08 21:08:20] 2026-03-09 01:07:29,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 21:08:20] 2026-03-09 01:07:29,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 21:08:20] 2026-03-09 01:07:29,493 | INFO     | aborting loop
[2026-03-08 21:08:20] 2026-03-09 01:07:29,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 21:08:20] 2026-03-09 01:07:29,845 | INFO     | all job control threads have been joined
[2026-03-08 21:08:20] 2026-03-09 01:07:30,028 | INFO     | all data control threads have been joined
[2026-03-08 21:08:20] 2026-03-09 01:07:30,495 | INFO     | [job] retrieve thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,498 | INFO     | [job] job monitor thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,513 | INFO     | [job] queue monitor thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,693 | INFO     | all payload control threads have been joined
[2026-03-08 21:08:20] 2026-03-09 01:07:30,716 | INFO     | [payload] failed_post thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,717 | INFO     | [payload] validate_post thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,758 | INFO     | [data] copytool_in thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,794 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,799 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,800 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,851 | INFO     | [job] control thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:30,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 21:08:20] 2026-03-09 01:07:30,991 | INFO     | [job] validate thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:31,034 | INFO     | [data] control thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:31,302 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:31,712 | INFO     | [payload] control thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:32,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 21:08:20] 2026-03-09 01:07:32,878 | INFO     | [data] copytool_out thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:36,143 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 21:08:20] 2026-03-09 01:07:40,053 | INFO     | [monitor] cgroup control has ended
[2026-03-08 21:08:20] 2026-03-09 01:07:40,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139846386349888)>', '<ExcThread(monitor, started 139845812877056)>']
[2026-03-08 21:08:20] 2026-03-09 01:07:45,930 | INFO     | all workflow threads have been joined
[2026-03-08 21:08:20] 2026-03-09 01:07:45,930 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 21:08:20] 2026-03-09 01:07:45,931 | INFO     | traces error code: 0
[2026-03-08 21:08:20] 2026-03-09 01:07:45,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 21:08:20] 2026-03-09 01:07:59,445 | INFO     | PID=221098 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 21:08:20] 2026-03-09 01:07:59,445 | INFO     | .. there are 29 such processes running
[2026-03-08 21:08:20] 2026-03-09 01:07:59,445 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 21:08:20] 2026-03-09 01:07:59,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 21:08:20] 2026-03-09 01:07:59,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 21:08:20] 2026-03-09 01:07:59,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 21:08:20] 2026-03-09 01:07:59,446 | INFO     | [monitor] control thread has ended
[2026-03-08 21:08:20] 2026-03-09 01:07:59,650 [wrapper] ==== pilot stdout END ====
[2026-03-08 21:08:20] 2026-03-09 01:07:59,665 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 21:08:20] 2026-03-09 01:07:59,688 [wrapper] pilotpid: 221098
[2026-03-08 21:08:20] 2026-03-09 01:07:59,719 [wrapper] Pilot exit status: 0
[2026-03-08 21:08:20] 2026-03-09 01:07:59,808 [wrapper] pandaids: 7033278289
[2026-03-08 21:08:20] 2026-03-09 01:08:00,371 [wrapper] cleanup supervisor_pilot  877516 221099
[2026-03-08 21:08:20] 2026-03-09 01:08:00,389 [wrapper] Test setup, not cleaning
[2026-03-08 21:08:20] 2026-03-09 01:08:00,415 [wrapper] apfmon messages muted
[2026-03-08 21:08:20] 2026-03-09 01:08:00,458 [wrapper] ==== wrapper stdout END ====
[2026-03-08 21:08:20] 2026-03-09 01:08:00,490 [wrapper] ==== wrapper stderr END ====
[2026-03-08 21:08:20]  *** Error codes and diagnostics ***
[2026-03-08 21:08:20]     "exeErrorCode": 0,
[2026-03-08 21:08:20]     "exeErrorDiag": "",
[2026-03-08 21:08:20]     "pilotErrorCode": 0,
[2026-03-08 21:08:20]     "pilotErrorDiag": "",
[2026-03-08 21:08:20]  *** Listing of results directory ***
[2026-03-08 21:08:20] total 328736
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 08:52 pilot3.tar.gz
[2026-03-08 21:08:20] -rwx------. 1 boincer umatlas     36322 Feb 28 08:52 runpilot2-wrapper.sh
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 08:53 queuedata.json
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas       100 Mar  8 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 21:08:20] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 17:29 run_atlas
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas       105 Mar  8 17:29 job.xml
[2026-03-08 21:08:20] -rw-r--r--. 2 boincer umatlas 189057629 Mar  8 17:29 EVNT.48700936._000013.pool.root.1
[2026-03-08 21:08:20] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 17:29 start_atlas.sh
[2026-03-08 21:08:20] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 17:29 shared
[2026-03-08 21:08:20] -rw-r--r--. 2 boincer umatlas    597931 Mar  8 17:29 input.tar.gz
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas         0 Mar  8 17:29 boinc_lockfile
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas      2498 Mar  8 17:29 pandaJob.out
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas        57 Mar  8 17:29 setup.sh.local
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas    999108 Mar  8 17:30 agis_schedconf.cvmfs.json
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas       443 Mar  8 17:31 workernode_map.json
[2026-03-08 21:08:20] drwx------. 5 boincer umatlas      4096 Mar  8 17:31 pilot3
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas      6879 Mar  8 21:04 init_data.xml
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas 139476938 Mar  8 21:05 HITS.48700938._000325.pool.root.1
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas       530 Mar  8 21:05 boinc_task_state.xml
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas      1042 Mar  8 21:07 memory_monitor_summary.json
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas        95 Mar  8 21:07 pilot_heartbeat.json
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas   1511578 Mar  8 21:07 agis_ddmendpoints.agis.ALL.json
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas    449673 Mar  8 21:07 log.48700938._000325.job.log.tgz.1
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas      6394 Mar  8 21:07 heartbeat.json
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas       822 Mar  8 21:07 pilotlog.txt
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 21:07 boinc_mmap_file
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas        28 Mar  8 21:08 wrapper_checkpoint.txt
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas   1631252 Mar  8 21:08 log.48700938._000325.job.log.1
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas       357 Mar  8 21:08 output.list
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas       620 Mar  8 21:08 runtime_log
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas   2099200 Mar  8 21:08 result.tar.gz
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas       658 Mar  8 21:08 xbALDm4uZG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkG7KDmnSpB7m.diag
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas      9352 Mar  8 21:08 runtime_log.err
[2026-03-08 21:08:20] -rw-r--r--. 1 boincer umatlas     21424 Mar  8 21:08 stderr.txt
[2026-03-08 21:08:20] HITS file was successfully produced:
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas 139476938 Mar  8 21:05 shared/HITS.pool.root.1
[2026-03-08 21:08:20]  *** Contents of shared directory: ***
[2026-03-08 21:08:20] total 323496
[2026-03-08 21:08:20] -rw-r--r--. 2 boincer umatlas 189057629 Mar  8 17:29 ATLAS.root_0
[2026-03-08 21:08:20] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 17:29 start_atlas.sh
[2026-03-08 21:08:20] -rw-r--r--. 2 boincer umatlas    597931 Mar  8 17:29 input.tar.gz
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas 139476938 Mar  8 21:05 HITS.pool.root.1
[2026-03-08 21:08:20] -rw-------. 1 boincer umatlas   2099200 Mar  8 21:08 result.tar.gz
21:08:22 (214268): run_atlas exited; CPU time 33603.277707
21:08:22 (214268): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN