Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:03:45 (31321): wrapper (7.7.26015): starting
03:03:45 (31321): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 03:03:45] Arguments: --nthreads 8
[2026-03-09 03:03:45] Threads: 8
[2026-03-09 03:03:45] Checking for CVMFS
[2026-03-09 03:03:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 03:03:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 03:03:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 03:03:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 03:03:48] 2.11.2.0 26786 119749 108004 157060 3 94 20333417 25165824 1081 130560 153 42910181 99.829 32109627 1045 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-09 03:03:48] CVMFS is ok
[2026-03-09 03:03:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 03:03:48] Checking for apptainer binary...
[2026-03-09 03:03:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 03:03:48] Running /usr/bin/apptainer --version
[2026-03-09 03:03:49] apptainer version 1.3.2-1.el7
[2026-03-09 03:03:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 03:04:00] cg-vwn410.simple-grid.lan
[2026-03-09 03:04:00] apptainer works
[2026-03-09 03:04:00] Set ATHENA_PROC_NUMBER=8
[2026-03-09 03:04:00] Set ATHENA_CORE_NUMBER=8
[2026-03-09 03:04:00] Starting ATLAS job with PandaID=7039377818
[2026-03-09 03:04:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 05:56:59]  *** The last 200 lines of the pilot log: ***
[2026-03-09 05:56:59] 2026-03-09 04:56:02,817 | INFO     | total number of processed events: 400 (read)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,819 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7039377818/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,819 | INFO     | extracted standard info from prmon json
[2026-03-09 05:56:59] 2026-03-09 04:56:02,820 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 05:56:59] 2026-03-09 04:56:02,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 05:56:59] 2026-03-09 04:56:02,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 05:56:59] 2026-03-09 04:56:02,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 05:56:59] 2026-03-09 04:56:02,824 | INFO     | fitting pss+swap vs Time
[2026-03-09 05:56:59] 2026-03-09 04:56:02,824 | INFO     | sum of square deviations: 1294014960.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,825 | INFO     | sum of deviations: 10044547310.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,825 | INFO     | mean x: 1773027220.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,826 | INFO     | mean y: 2470996.7204968943
[2026-03-09 05:56:59] 2026-03-09 04:56:02,826 | INFO     | intersect: -13760318726.520245
[2026-03-09 05:56:59] 2026-03-09 04:56:02,826 | INFO     | chi2: 2.316698717242623
[2026-03-09 05:56:59] 2026-03-09 04:56:02,827 | INFO     | sum of square deviations: 1177156955.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,828 | INFO     | sum of deviations: 20350947032.5
[2026-03-09 05:56:59] 2026-03-09 04:56:02,828 | INFO     | mean x: 1773027067.5
[2026-03-09 05:56:59] 2026-03-09 04:56:02,828 | INFO     | mean y: 2484096.8012820515
[2026-03-09 05:56:59] 2026-03-09 04:56:02,828 | INFO     | intersect: -30649995833.439888
[2026-03-09 05:56:59] 2026-03-09 04:56:02,828 | INFO     | chi2: 1.5419916690944677
[2026-03-09 05:56:59] 2026-03-09 04:56:02,829 | INFO     | current chi2=1.5419916690944677 (change=33.440129369529146 %)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,829 | INFO     | sum of square deviations: 1067554900.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,830 | INFO     | sum of deviations: 19808269346.999992
[2026-03-09 05:56:59] 2026-03-09 04:56:02,830 | INFO     | mean x: 1773026915.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,830 | INFO     | mean y: 2483341.476821192
[2026-03-09 05:56:59] 2026-03-09 04:56:02,830 | INFO     | intersect: -32895679265.242943
[2026-03-09 05:56:59] 2026-03-09 04:56:02,831 | INFO     | chi2: 1.543388219730488
[2026-03-09 05:56:59] 2026-03-09 04:56:02,831 | INFO     | current chi2=1.543388219730488 (change=-0.09056797543143737 %)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,831 | INFO     | right removable region: 150
[2026-03-09 05:56:59] 2026-03-09 04:56:02,831 | INFO     | sum of square deviations: 1177156955.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,832 | INFO     | sum of deviations: -16015554056.5
[2026-03-09 05:56:59] 2026-03-09 04:56:02,833 | INFO     | mean x: 1773027372.5
[2026-03-09 05:56:59] 2026-03-09 04:56:02,837 | INFO     | mean y: 2504603.4423076925
[2026-03-09 05:56:59] 2026-03-09 04:56:02,837 | INFO     | intersect: 24125044598.90783
[2026-03-09 05:56:59] 2026-03-09 04:56:02,838 | INFO     | chi2: 0.8303495642086232
[2026-03-09 05:56:59] 2026-03-09 04:56:02,838 | INFO     | current chi2=0.8303495642086232 (change=64.15806863324376 %)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,838 | INFO     | sum of square deviations: 1067554900.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,839 | INFO     | sum of deviations: -17670243625.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,839 | INFO     | mean x: 1773027525.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,839 | INFO     | mean y: 2506848.0993377483
[2026-03-09 05:56:59] 2026-03-09 04:56:02,839 | INFO     | intersect: 29349782871.637592
[2026-03-09 05:56:59] 2026-03-09 04:56:02,840 | INFO     | chi2: 0.8094529508982363
[2026-03-09 05:56:59] 2026-03-09 04:56:02,840 | INFO     | current chi2=0.8094529508982363 (change=2.516604356901501 %)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,840 | INFO     | left removable region: 20
[2026-03-09 05:56:59] 2026-03-09 04:56:02,840 | INFO     | sum of square deviations: 681212772.5
[2026-03-09 05:56:59] 2026-03-09 04:56:02,841 | INFO     | sum of deviations: -5513681298.0
[2026-03-09 05:56:59] 2026-03-09 04:56:02,841 | INFO     | mean x: 1773027494.5
[2026-03-09 05:56:59] 2026-03-09 04:56:02,842 | INFO     | mean y: 2520461.476923077
[2026-03-09 05:56:59] 2026-03-09 04:56:02,842 | INFO     | intersect: 14353262156.157124
[2026-03-09 05:56:59] 2026-03-09 04:56:02,842 | INFO     | chi2: 0.007727973530277507
[2026-03-09 05:56:59] 2026-03-09 04:56:02,842 | INFO     | current memory leak: -8.09 B/s (using 130 data points, chi2=0.01)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,843 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-03-09 05:56:59] 2026-03-09 04:56:02,843 | INFO     | ..............................
[2026-03-09 05:56:59] 2026-03-09 04:56:02,843 | INFO     | . Timing measurements:
[2026-03-09 05:56:59] 2026-03-09 04:56:02,843 | INFO     | . get job = 0 s
[2026-03-09 05:56:59] 2026-03-09 04:56:02,843 | INFO     | . initial setup = 125 s
[2026-03-09 05:56:59] 2026-03-09 04:56:02,843 | INFO     | . payload setup = 85 s
[2026-03-09 05:56:59] 2026-03-09 04:56:02,844 | INFO     | . stage-in = 0 s
[2026-03-09 05:56:59] 2026-03-09 04:56:02,844 | INFO     | . payload execution = 9822 s
[2026-03-09 05:56:59] 2026-03-09 04:56:02,844 | INFO     | . stage-out = 3 s
[2026-03-09 05:56:59] 2026-03-09 04:56:02,844 | INFO     | . log creation = 1 s
[2026-03-09 05:56:59] 2026-03-09 04:56:02,844 | INFO     | ..............................
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | 
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | job summary report
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | --------------------------------------------------
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | PanDA job id: 7039377818
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | task id: 48955015
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | errors: (none)
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | pilot state: finished 
[2026-03-09 05:56:59] 2026-03-09 04:56:03,016 | INFO     | transexitcode: 0
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | exeerrorcode: 0
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | exeerrordiag: 
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | exitcode: 0
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | exitmsg: OK
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | cpuconsumptiontime: 53204 s
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | nevents: 400
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | neventsw: 0
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | pid: 7368
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | pgrp: 7368
[2026-03-09 05:56:59] 2026-03-09 04:56:03,017 | INFO     | corecount: 8
[2026-03-09 05:56:59] 2026-03-09 04:56:03,018 | INFO     | event service: False
[2026-03-09 05:56:59] 2026-03-09 04:56:03,018 | INFO     | sizes: {0: 2279743, 1: 2280200, 2: 2280260, 12: 2280288, 9912: 2308821, 9916: 2318003, 9918: 2318205}
[2026-03-09 05:56:59] 2026-03-09 04:56:03,018 | INFO     | --------------------------------------------------
[2026-03-09 05:56:59] 2026-03-09 04:56:03,018 | INFO     | 
[2026-03-09 05:56:59] 2026-03-09 04:56:03,018 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-09 05:56:59] 2026-03-09 04:56:03,524 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,524 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,524 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,524 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,526 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 05:56:59] 2026-03-09 04:56:03,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,526 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 05:56:59] 2026-03-09 04:56:03,526 | INFO     | job 7039377818 has completed (purged errors)
[2026-03-09 05:56:59] 2026-03-09 04:56:03,526 | INFO     | overall cleanup function is called
[2026-03-09 05:56:59] 2026-03-09 04:56:04,535 | INFO     | --- collectZombieJob: --- 10, [7368]
[2026-03-09 05:56:59] 2026-03-09 04:56:04,535 | INFO     | zombie collector waiting for pid 7368
[2026-03-09 05:56:59] 2026-03-09 04:56:04,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 05:56:59] 2026-03-09 04:56:04,535 | INFO     | collected zombie processes
[2026-03-09 05:56:59] 2026-03-09 04:56:04,536 | INFO     | will attempt to kill all subprocesses of pid=7368
[2026-03-09 05:56:59] 2026-03-09 04:56:04,617 | INFO     | process IDs to be killed: [7368] (in reverse order)
[2026-03-09 05:56:59] 2026-03-09 04:56:05,292 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 05:56:59] 2026-03-09 04:56:05,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 05:56:59] 2026-03-09 04:56:05,295 | INFO     | did not find any defunct processes belonging to 7368
[2026-03-09 05:56:59] 2026-03-09 04:56:05,297 | INFO     | did not find any defunct processes belonging to 7368
[2026-03-09 05:56:59] 2026-03-09 04:56:05,297 | INFO     | ready for new job
[2026-03-09 05:56:59] 2026-03-09 04:56:05,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 05:56:59] 2026-03-09 04:56:05,299 | INFO     | **************************************
[2026-03-09 05:56:59] 2026-03-09 04:56:05,299 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 05:56:59] 2026-03-09 04:56:05,299 | INFO     | **************************************
[2026-03-09 05:56:59] 2026-03-09 04:56:05,299 | INFO     | 
[2026-03-09 05:56:59] 2026-03-09 04:56:05,300 | INFO     | pilot is running in a VM
[2026-03-09 05:56:59] 2026-03-09 04:56:05,300 | INFO     | architecture information:
[2026-03-09 05:56:59] 2026-03-09 04:56:05,308 | INFO     | executing command: cat /etc/os-release
[2026-03-09 05:56:59] 2026-03-09 04:56:05,542 | INFO     | cat /etc/os-release:
[2026-03-09 05:56:59] NAME="CentOS Linux"
[2026-03-09 05:56:59] VERSION="7 (Core)"
[2026-03-09 05:56:59] ID="centos"
[2026-03-09 05:56:59] ID_LIKE="rhel fedora"
[2026-03-09 05:56:59] VERSION_ID="7"
[2026-03-09 05:56:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 05:56:59] ANSI_COLOR="0;31"
[2026-03-09 05:56:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 05:56:59] HOME_URL="https://www.centos.org/"
[2026-03-09 05:56:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 05:56:59] 
[2026-03-09 05:56:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 05:56:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 05:56:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 05:56:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 05:56:59] 
[2026-03-09 05:56:59] 2026-03-09 04:56:05,543 | INFO     | **************************************
[2026-03-09 05:56:59] 2026-03-09 04:56:06,046 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-09 05:56:59] 2026-03-09 04:56:06,280 | INFO     | sufficient remaining disk space (496568893440 B)
[2026-03-09 05:56:59] 2026-03-09 04:56:06,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 05:56:59] 2026-03-09 04:56:06,280 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 05:56:59] 2026-03-09 04:56:06,280 | INFO     | update_server=False
[2026-03-09 05:56:59] 2026-03-09 04:56:06,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 05:56:59] 2026-03-09 04:56:06,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 05:56:59] 2026-03-09 04:56:06,327 | INFO     | all payload control threads have been joined
[2026-03-09 05:56:59] 2026-03-09 04:56:06,690 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 05:56:59] 2026-03-09 04:56:06,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 05:56:59] 2026-03-09 04:56:06,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 05:56:59] 2026-03-09 04:56:06,691 | INFO     | will abort loop
[2026-03-09 05:56:59] 2026-03-09 04:56:07,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 05:56:59] 2026-03-09 04:56:07,097 | INFO     | all job control threads have been joined
[2026-03-09 05:56:59] 2026-03-09 04:56:07,173 | INFO     | all data control threads have been joined
[2026-03-09 05:56:59] 2026-03-09 04:56:07,286 | INFO     | [job] retrieve thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:07,333 | INFO     | [payload] control thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:07,402 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:07,609 | INFO     | [job] validate thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:07,696 | INFO     | [job] job monitor thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:07,761 | INFO     | [payload] validate_post thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:07,765 | INFO     | [data] copytool_in thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:07,956 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:08,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 05:56:59] 2026-03-09 04:56:08,103 | INFO     | [job] control thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:08,179 | INFO     | [data] control thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:08,288 | INFO     | [data] copytool_out thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:08,426 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:08,683 | INFO     | [payload] failed_post thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:08,711 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:09,036 | INFO     | [job] queue monitor thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:11,067 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 05:56:59] 2026-03-09 04:56:35,515 | INFO     | PID=2900 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-09 05:56:59] 2026-03-09 04:56:35,515 | INFO     | .. there are 2 such processes running
[2026-03-09 05:56:59] 2026-03-09 04:56:35,516 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 05:56:59] 2026-03-09 04:56:35,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 05:56:59] 2026-03-09 04:56:35,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 05:56:59] 2026-03-09 04:56:48,335 | INFO     | [monitor] cgroup control has ended
[2026-03-09 05:56:59] 2026-03-09 04:56:48,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244430919488)>', '<ExcThread(monitor, started 140243617437440)>']
[2026-03-09 05:56:59] 2026-03-09 04:56:49,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 05:56:59] 2026-03-09 04:56:49,600 | INFO     | [monitor] control thread has ended
[2026-03-09 05:56:59] 2026-03-09 04:56:53,888 | INFO     | all workflow threads have been joined
[2026-03-09 05:56:59] 2026-03-09 04:56:53,888 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 05:56:59] 2026-03-09 04:56:53,888 | INFO     | traces error code: 0
[2026-03-09 05:56:59] 2026-03-09 04:56:53,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 05:56:59] 2026-03-09 04:56:54,403 [wrapper] ==== pilot stdout END ====
[2026-03-09 05:56:59] 2026-03-09 04:56:54,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 05:56:59] 2026-03-09 04:56:54,630 [wrapper] pilotpid: 2900
[2026-03-09 05:56:59] 2026-03-09 04:56:54,758 [wrapper] Pilot exit status: 0
[2026-03-09 05:56:59] 2026-03-09 04:56:55,331 [wrapper] pandaids: 7039377818
[2026-03-09 05:56:59] 2026-03-09 04:56:55,917 [wrapper] cleanup supervisor_pilot  4056 2901
[2026-03-09 05:56:59] 2026-03-09 04:56:56,050 [wrapper] Test setup, not cleaning
[2026-03-09 05:56:59] 2026-03-09 04:56:56,141 [wrapper] apfmon messages muted
[2026-03-09 05:56:59] 2026-03-09 04:56:56,253 [wrapper] ==== wrapper stdout END ====
[2026-03-09 05:56:59] 2026-03-09 04:56:56,356 [wrapper] ==== wrapper stderr END ====
[2026-03-09 05:56:59]  *** Error codes and diagnostics ***
[2026-03-09 05:56:59]     "exeErrorCode": 0,
[2026-03-09 05:56:59]     "exeErrorDiag": "",
[2026-03-09 05:56:59]     "pilotErrorCode": 0,
[2026-03-09 05:56:59]     "pilotErrorDiag": "",
[2026-03-09 05:56:59]  *** Listing of results directory ***
[2026-03-09 05:56:59] total 621196
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc      5111 Mar  8 01:05 queuedata.json
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc    584627 Mar  8 01:05 pilot3.tar.gz
[2026-03-09 05:56:59] -rwx------. 1 boinc boinc     36322 Mar  8 01:06 runpilot2-wrapper.sh
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc       100 Mar  9 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 05:56:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 03:03 run_atlas
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc       105 Mar  9 03:03 job.xml
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc      6391 Mar  9 03:03 init_data.xml
[2026-03-09 05:56:59] -rw-r--r--. 2 boinc boinc 441255185 Mar  9 03:03 EVNT.46701403._002207.pool.root.1
[2026-03-09 05:56:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 03:03 start_atlas.sh
[2026-03-09 05:56:59] drwxrwx--x. 2 boinc boinc        68 Mar  9 03:03 shared
[2026-03-09 05:56:59] -rw-r--r--. 2 boinc boinc    597953 Mar  9 03:03 input.tar.gz
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc         0 Mar  9 03:03 boinc_lockfile
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc      2569 Mar  9 03:04 pandaJob.out
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc   1511578 Mar  9 03:08 agis_ddmendpoints.agis.ALL.json
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc       415 Mar  9 03:10 workernode_map.json
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc    999108 Mar  9 03:10 agis_schedconf.cvmfs.json
[2026-03-09 05:56:59] drwx------. 5 boinc boinc      4096 Mar  9 03:10 pilot3
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc 187326509 Mar  9 05:54 HITS.48955015._007854.pool.root.1
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc       531 Mar  9 05:54 boinc_task_state.xml
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc      1021 Mar  9 05:55 memory_monitor_summary.json
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc    390562 Mar  9 05:55 log.48955015._007854.job.log.tgz.1
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc      6324 Mar  9 05:56 heartbeat.json
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc        95 Mar  9 05:56 pilot_heartbeat.json
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc      8192 Mar  9 05:56 boinc_mmap_file
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc        28 Mar  9 05:56 wrapper_checkpoint.txt
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc      5065 Mar  9 05:56 pilotlog.txt
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc   1409543 Mar  9 05:56 log.48955015._007854.job.log.1
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc       357 Mar  9 05:56 output.list
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc       620 Mar  9 05:56 runtime_log
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc   1822720 Mar  9 05:56 result.tar.gz
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc       654 Mar  9 05:56 ypJLDmGqGJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgYXLDmdGcmpm.diag
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc      8816 Mar  9 05:56 runtime_log.err
[2026-03-09 05:56:59] -rw-r--r--. 1 boinc boinc     20688 Mar  9 05:56 stderr.txt
[2026-03-09 05:56:59] HITS file was successfully produced:
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc 187326509 Mar  9 05:54 shared/HITS.pool.root.1
[2026-03-09 05:56:59]  *** Contents of shared directory: ***
[2026-03-09 05:56:59] total 616236
[2026-03-09 05:56:59] -rw-r--r--. 2 boinc boinc 441255185 Mar  9 03:03 ATLAS.root_0
[2026-03-09 05:56:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 03:03 start_atlas.sh
[2026-03-09 05:56:59] -rw-r--r--. 2 boinc boinc    597953 Mar  9 03:03 input.tar.gz
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc 187326509 Mar  9 05:54 HITS.pool.root.1
[2026-03-09 05:56:59] -rw-------. 1 boinc boinc   1822720 Mar  9 05:56 result.tar.gz
05:57:00 (31321): run_atlas exited; CPU time 53293.878590
05:57:00 (31321): called boinc_finish(0)

</stderr_txt>
]]>

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