Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:24:25 (783350): wrapper (7.7.26015): starting
14:24:25 (783350): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 14:24:25] Arguments: --nthreads 8
[2026-03-08 14:24:25] Threads: 8
[2026-03-08 14:24:25] Checking for CVMFS
[2026-03-08 14:24:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 14:24:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 14:24:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 14:24:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 14:24:25] 2.13.3.0 11836 175807 664036 157049 2 581 18173624 32935937 25598 16776704 0 611995468 99.498 786962379 33799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-08 14:24:25] CVMFS is ok
[2026-03-08 14:24:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 14:24:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 14:24:25] Further information can be found at the LHC@home message board.
[2026-03-08 14:24:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 14:24:25] Checking for apptainer binary...
[2026-03-08 14:24:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 14:24:25] Running /usr/bin/apptainer --version
[2026-03-08 14:24:25] apptainer version 1.4.5-2.el9
[2026-03-08 14:24:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 14:24:25] c6-2-11-1.aglt2.org
[2026-03-08 14:24:25] apptainer works
[2026-03-08 14:24:25] Set ATHENA_PROC_NUMBER=8
[2026-03-08 14:24:25] Set ATHENA_CORE_NUMBER=8
[2026-03-08 14:24:25] Starting ATLAS job with PandaID=7039873967
[2026-03-08 14:24:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 20:04:26]  *** The last 200 lines of the pilot log: ***
[2026-03-08 20:04:26] 2026-03-09 00:03:35,156 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7039873967/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:04:26] 2026-03-09 00:03:35,156 | INFO     | extracted standard info from prmon json
[2026-03-08 20:04:26] 2026-03-09 00:03:35,157 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 20:04:26] 2026-03-09 00:03:35,157 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 20:04:26] 2026-03-09 00:03:35,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 20:04:26] 2026-03-09 00:03:35,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 20:04:26] 2026-03-09 00:03:35,306 | INFO     | fitting pss+swap vs Time
[2026-03-08 20:04:26] 2026-03-09 00:03:35,306 | INFO     | sum of square deviations: 11450051758.330343
[2026-03-08 20:04:26] 2026-03-09 00:03:35,327 | INFO     | sum of deviations: -9741028880.72073
[2026-03-08 20:04:26] 2026-03-09 00:03:35,328 | INFO     | mean x: 1773004429.4474475
[2026-03-08 20:04:26] 2026-03-09 00:03:35,328 | INFO     | mean y: 2488129.3873873875
[2026-03-08 20:04:26] 2026-03-09 00:03:35,328 | INFO     | intersect: 1510855752.2960038
[2026-03-08 20:04:26] 2026-03-09 00:03:35,328 | INFO     | chi2: 2.8017286938642076
[2026-03-08 20:04:26] 2026-03-09 00:03:35,347 | INFO     | sum of square deviations: 10942011671.219503
[2026-03-08 20:04:26] 2026-03-09 00:03:35,350 | INFO     | sum of deviations: 31707192826.09755
[2026-03-08 20:04:26] 2026-03-09 00:03:35,350 | INFO     | mean x: 1773004276.9512196
[2026-03-08 20:04:26] 2026-03-09 00:03:35,350 | INFO     | mean y: 2500456.6310975607
[2026-03-08 20:04:26] 2026-03-09 00:03:35,351 | INFO     | intersect: -5135219204.06476
[2026-03-08 20:04:26] 2026-03-09 00:03:35,384 | INFO     | chi2: 1.4033751629194393
[2026-03-08 20:04:26] 2026-03-09 00:03:35,384 | INFO     | current chi2=1.4033751629194393 (change=49.91038332894851 %)
[2026-03-08 20:04:26] 2026-03-09 00:03:35,385 | INFO     | sum of square deviations: 10449187545.90708
[2026-03-08 20:04:26] 2026-03-09 00:03:35,388 | INFO     | sum of deviations: 31267647797.012337
[2026-03-08 20:04:26] 2026-03-09 00:03:35,406 | INFO     | mean x: 1773004124.4489164
[2026-03-08 20:04:26] 2026-03-09 00:03:35,406 | INFO     | mean y: 2500320.6068111453
[2026-03-08 20:04:26] 2026-03-09 00:03:35,406 | INFO     | intersect: -5302952209.779988
[2026-03-08 20:04:26] 2026-03-09 00:03:35,407 | INFO     | chi2: 1.403724951934161
[2026-03-08 20:04:26] 2026-03-09 00:03:35,407 | INFO     | current chi2=1.403724951934161 (change=-0.024924840054461807 %)
[2026-03-08 20:04:26] 2026-03-09 00:03:35,407 | INFO     | right removable region: 322
[2026-03-08 20:04:26] 2026-03-09 00:03:35,408 | INFO     | sum of square deviations: 10941940972.313967
[2026-03-08 20:04:26] 2026-03-09 00:03:35,429 | INFO     | sum of deviations: -60226357290.33843
[2026-03-08 20:04:26] 2026-03-09 00:03:35,430 | INFO     | mean x: 1773004581.9542682
[2026-03-08 20:04:26] 2026-03-09 00:03:35,430 | INFO     | mean y: 2503185.7774390243
[2026-03-08 20:04:26] 2026-03-09 00:03:35,430 | INFO     | intersect: 9761430573.557255
[2026-03-08 20:04:26] 2026-03-09 00:03:35,430 | INFO     | chi2: 1.4452953500878425
[2026-03-08 20:04:26] 2026-03-09 00:03:35,431 | INFO     | current chi2=1.4452953500878425 (change=48.414157543053946 %)
[2026-03-08 20:04:26] 2026-03-09 00:03:35,431 | INFO     | sum of square deviations: 10449106416.18581
[2026-03-08 20:04:26] 2026-03-09 00:03:35,445 | INFO     | sum of deviations: -58899561541.377686
[2026-03-08 20:04:26] 2026-03-09 00:03:35,445 | INFO     | mean x: 1773004734.4582043
[2026-03-08 20:04:26] 2026-03-09 00:03:35,445 | INFO     | mean y: 2502772.93498452
[2026-03-08 20:04:26] 2026-03-09 00:03:35,445 | INFO     | intersect: 9996582391.897686
[2026-03-08 20:04:26] 2026-03-09 00:03:35,446 | INFO     | chi2: 1.4453702327231774
[2026-03-08 20:04:26] 2026-03-09 00:03:35,446 | INFO     | current chi2=1.4453702327231774 (change=-0.0051811303018721 %)
[2026-03-08 20:04:26] 2026-03-09 00:03:35,463 | INFO     | left removable region: 20
[2026-03-08 20:04:26] 2026-03-09 00:03:35,464 | INFO     | sum of square deviations: 8540704544.255011
[2026-03-08 20:04:26] 2026-03-09 00:03:35,466 | INFO     | sum of deviations: -12394635146.639076
[2026-03-08 20:04:26] 2026-03-09 00:03:35,466 | INFO     | mean x: 1773004703.9503312
[2026-03-08 20:04:26] 2026-03-09 00:03:35,466 | INFO     | mean y: 2514030.890728477
[2026-03-08 20:04:26] 2026-03-09 00:03:35,466 | INFO     | intersect: 2575574169.532498
[2026-03-08 20:04:26] 2026-03-09 00:03:35,485 | INFO     | chi2: 0.022975632076493856
[2026-03-08 20:04:26] 2026-03-09 00:03:35,486 | INFO     | current memory leak: -1.45 B/s (using 302 data points, chi2=0.02)
[2026-03-08 20:04:26] 2026-03-09 00:03:35,486 | INFO     | could have reported an average CPU frequency of 2823 MHz (15 samples)
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | ..............................
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . Timing measurements:
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . get job = 0 s
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . initial setup = 6 s
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . payload setup = 5 s
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . stage-in = 0 s
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . payload execution = 20296 s
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . stage-out = 6 s
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | . log creation = 0 s
[2026-03-08 20:04:26] 2026-03-09 00:03:35,487 | INFO     | ..............................
[2026-03-08 20:04:26] 2026-03-09 00:03:35,839 | INFO     | PID=787125 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 20:04:26] 2026-03-09 00:03:35,840 | INFO     | .. there are 30 such processes running
[2026-03-08 20:04:26] 2026-03-09 00:03:36,362 | INFO     | 
[2026-03-08 20:04:26] 2026-03-09 00:03:36,362 | INFO     | job summary report
[2026-03-08 20:04:26] 2026-03-09 00:03:36,362 | INFO     | --------------------------------------------------
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | PanDA job id: 7039873967
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | task id: 48955006
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | errors: (none)
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | pilot state: finished 
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | transexitcode: 0
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | exeerrorcode: 0
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | exeerrordiag: 
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | exitcode: 0
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | exitmsg: OK
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | cpuconsumptiontime: 39818 s
[2026-03-08 20:04:26] 2026-03-09 00:03:36,363 | INFO     | nevents: 400
[2026-03-08 20:04:26] 2026-03-09 00:03:36,388 | INFO     | neventsw: 0
[2026-03-08 20:04:26] 2026-03-09 00:03:36,388 | INFO     | pid: 792339
[2026-03-08 20:04:26] 2026-03-09 00:03:36,388 | INFO     | pgrp: 792339
[2026-03-08 20:04:26] 2026-03-09 00:03:36,388 | INFO     | corecount: 8
[2026-03-08 20:04:26] 2026-03-09 00:03:36,388 | INFO     | event service: False
[2026-03-08 20:04:26] 2026-03-09 00:03:36,389 | INFO     | sizes: {0: 2295372, 1: 2295833, 11: 2295833, 20309: 2329242, 20318: 2333528, 20320: 2333584, 20324: 2333906}
[2026-03-08 20:04:26] 2026-03-09 00:03:36,389 | INFO     | --------------------------------------------------
[2026-03-08 20:04:26] 2026-03-09 00:03:36,389 | INFO     | 
[2026-03-08 20:04:26] 2026-03-09 00:03:36,389 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-08 20:04:26] 2026-03-09 00:03:36,547 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 20:04:26] 2026-03-09 00:03:36,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,550 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 20:04:26] 2026-03-09 00:03:36,550 | INFO     | job 7039873967 has completed (purged errors)
[2026-03-08 20:04:26] 2026-03-09 00:03:36,550 | INFO     | overall cleanup function is called
[2026-03-08 20:04:26] 2026-03-09 00:03:37,584 | INFO     | --- collectZombieJob: --- 10, [792339]
[2026-03-08 20:04:26] 2026-03-09 00:03:37,584 | INFO     | zombie collector waiting for pid 792339
[2026-03-08 20:04:26] 2026-03-09 00:03:37,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 20:04:26] 2026-03-09 00:03:37,584 | INFO     | collected zombie processes
[2026-03-08 20:04:26] 2026-03-09 00:03:37,584 | INFO     | will attempt to kill all subprocesses of pid=792339
[2026-03-08 20:04:26] 2026-03-09 00:03:40,857 | INFO     | process IDs to be killed: [792339] (in reverse order)
[2026-03-08 20:04:26] 2026-03-09 00:03:41,470 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 20:04:26] 2026-03-09 00:03:41,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 20:04:26] 2026-03-09 00:03:41,506 | INFO     | did not find any defunct processes belonging to 792339
[2026-03-08 20:04:26] 2026-03-09 00:03:41,545 | INFO     | did not find any defunct processes belonging to 792339
[2026-03-08 20:04:26] 2026-03-09 00:03:41,546 | INFO     | ready for new job
[2026-03-08 20:04:26] 2026-03-09 00:03:41,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 20:04:26] 2026-03-09 00:03:41,549 | INFO     | **************************************
[2026-03-08 20:04:26] 2026-03-09 00:03:41,549 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 20:04:26] 2026-03-09 00:03:41,550 | INFO     | **************************************
[2026-03-08 20:04:26] 2026-03-09 00:03:41,550 | INFO     | 
[2026-03-08 20:04:26] 2026-03-09 00:03:41,601 | INFO     | architecture information:
[2026-03-08 20:04:26] 2026-03-09 00:03:41,606 | INFO     | executing command: cat /etc/os-release
[2026-03-08 20:04:26] 2026-03-09 00:03:41,680 | INFO     | cat /etc/os-release:
[2026-03-08 20:04:26] NAME="CentOS Linux"
[2026-03-08 20:04:26] VERSION="7 (Core)"
[2026-03-08 20:04:26] ID="centos"
[2026-03-08 20:04:26] ID_LIKE="rhel fedora"
[2026-03-08 20:04:26] VERSION_ID="7"
[2026-03-08 20:04:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 20:04:26] ANSI_COLOR="0;31"
[2026-03-08 20:04:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 20:04:26] HOME_URL="https://www.centos.org/"
[2026-03-08 20:04:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 20:04:26] 
[2026-03-08 20:04:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 20:04:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 20:04:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 20:04:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 20:04:26] 
[2026-03-08 20:04:26] 2026-03-09 00:03:41,680 | INFO     | **************************************
[2026-03-08 20:04:26] 2026-03-09 00:03:42,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-08 20:04:26] 2026-03-09 00:03:42,258 | INFO     | sufficient remaining disk space (92791635968 B)
[2026-03-08 20:04:26] 2026-03-09 00:03:42,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 20:04:26] 2026-03-09 00:03:42,259 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 20:04:26] 2026-03-09 00:03:42,259 | INFO     | update_server=False
[2026-03-08 20:04:26] 2026-03-09 00:03:42,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 20:04:26] 2026-03-09 00:03:42,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:04:26] 2026-03-09 00:03:42,564 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-08 20:04:26] 2026-03-09 00:03:42,564 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-08 20:04:26] 2026-03-09 00:03:42,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:04:26] 2026-03-09 00:03:42,565 | INFO     | will abort loop
[2026-03-08 20:04:26] 2026-03-09 00:03:42,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 20:04:26] 2026-03-09 00:03:42,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 20:04:26] 2026-03-09 00:03:43,191 | INFO     | all data control threads have been joined
[2026-03-08 20:04:26] 2026-03-09 00:03:43,215 | INFO     | all job control threads have been joined
[2026-03-08 20:04:26] 2026-03-09 00:03:43,249 | INFO     | all payload control threads have been joined
[2026-03-08 20:04:26] 2026-03-09 00:03:43,265 | INFO     | [job] retrieve thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:43,267 | INFO     | [job] queue monitor thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:43,322 | INFO     | [payload] failed_post thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:43,570 | INFO     | [job] job monitor thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:43,679 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:43,680 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:43,949 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,159 | INFO     | [payload] validate_post thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,204 | INFO     | [data] control thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,223 | INFO     | [job] control thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,255 | INFO     | [payload] control thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,681 | INFO     | [job] validate thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,682 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,749 | INFO     | [data] copytool_in thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:44,799 | INFO     | [data] copytool_out thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:03:46,720 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 20:04:26] 2026-03-09 00:04:13,021 | INFO     | PID=787125 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 20:04:26] 2026-03-09 00:04:13,021 | INFO     | .. there are 30 such processes running
[2026-03-08 20:04:26] 2026-03-09 00:04:13,039 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 20:04:26] 2026-03-09 00:04:13,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 20:04:26] 2026-03-09 00:04:13,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 20:04:26] 2026-03-09 00:04:17,341 | INFO     | [monitor] cgroup control has ended
[2026-03-08 20:04:26] 2026-03-09 00:04:19,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661916669760)>', '<ExcThread(monitor, started 139661548689152)>']
[2026-03-08 20:04:26] 2026-03-09 00:04:20,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 20:04:26] 2026-03-09 00:04:20,098 | INFO     | [monitor] control thread has ended
[2026-03-08 20:04:26] 2026-03-09 00:04:24,210 | INFO     | all workflow threads have been joined
[2026-03-08 20:04:26] 2026-03-09 00:04:24,210 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 20:04:26] 2026-03-09 00:04:24,210 | INFO     | traces error code: 0
[2026-03-08 20:04:26] 2026-03-09 00:04:24,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 20:04:26] 2026-03-09 00:04:25,535 [wrapper] ==== pilot stdout END ====
[2026-03-08 20:04:26] 2026-03-09 00:04:25,555 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 20:04:26] 2026-03-09 00:04:25,572 [wrapper] pilotpid: 787125
[2026-03-08 20:04:26] 2026-03-09 00:04:25,587 [wrapper] Pilot exit status: 0
[2026-03-08 20:04:26] 2026-03-09 00:04:25,728 [wrapper] pandaids: 7039873967
[2026-03-08 20:04:26] 2026-03-09 00:04:26,076 [wrapper] cleanup supervisor_pilot 1734602 787126
[2026-03-08 20:04:26] 2026-03-09 00:04:26,097 [wrapper] Test setup, not cleaning
[2026-03-08 20:04:26] 2026-03-09 00:04:26,141 [wrapper] apfmon messages muted
[2026-03-08 20:04:26] 2026-03-09 00:04:26,170 [wrapper] ==== wrapper stdout END ====
[2026-03-08 20:04:26] 2026-03-09 00:04:26,183 [wrapper] ==== wrapper stderr END ====
[2026-03-08 20:04:26]  *** Error codes and diagnostics ***
[2026-03-08 20:04:26]     "exeErrorCode": 0,
[2026-03-08 20:04:26]     "exeErrorDiag": "",
[2026-03-08 20:04:26]     "pilotErrorCode": 0,
[2026-03-08 20:04:26]     "pilotErrorDiag": "",
[2026-03-08 20:04:26]  *** Listing of results directory ***
[2026-03-08 20:04:26] total 617284
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas    584627 Mar  8 09:03 pilot3.tar.gz
[2026-03-08 20:04:26] -rwx------. 1 boincer umatlas     36322 Mar  8 09:08 runpilot2-wrapper.sh
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas      5111 Mar  8 09:08 queuedata.json
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas       100 Mar  8 14:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 20:04:26] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 14:24 run_atlas
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas       105 Mar  8 14:24 job.xml
[2026-03-08 20:04:26] -rw-r--r--. 2 boincer umatlas 438419447 Mar  8 14:24 EVNT.46701403._000515.pool.root.1
[2026-03-08 20:04:26] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 14:24 start_atlas.sh
[2026-03-08 20:04:26] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 14:24 shared
[2026-03-08 20:04:26] -rw-r--r--. 2 boincer umatlas    597959 Mar  8 14:24 input.tar.gz
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas         0 Mar  8 14:24 boinc_lockfile
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas      2564 Mar  8 14:24 pandaJob.out
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas        57 Mar  8 14:24 setup.sh.local
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas    999212 Mar  8 14:24 agis_schedconf.cvmfs.json
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas       442 Mar  8 14:24 workernode_map.json
[2026-03-08 20:04:26] drwx------. 5 boincer umatlas      4096 Mar  8 14:24 pilot3
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas 183864538 Mar  8 20:00 HITS.48955006._025737.pool.root.1
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas       531 Mar  8 20:00 boinc_task_state.xml
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas      6877 Mar  8 20:00 init_data.xml
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas      1041 Mar  8 20:03 memory_monitor_summary.json
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas   1511578 Mar  8 20:03 agis_ddmendpoints.agis.ALL.json
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas    527271 Mar  8 20:03 log.48955006._025737.job.log.tgz.1
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas      6395 Mar  8 20:03 heartbeat.json
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas        95 Mar  8 20:04 pilot_heartbeat.json
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 20:04 boinc_mmap_file
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas        28 Mar  8 20:04 wrapper_checkpoint.txt
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas      5005 Mar  8 20:04 pilotlog.txt
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas   2414561 Mar  8 20:04 log.48955006._025737.job.log.1
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas       357 Mar  8 20:04 output.list
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas       620 Mar  8 20:04 runtime_log
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas   2959360 Mar  8 20:04 result.tar.gz
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas      9347 Mar  8 20:04 runtime_log.err
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas       656 Mar  8 20:04 ocyNDme2SJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGGZLDm9r06mn.diag
[2026-03-08 20:04:26] -rw-r--r--. 1 boincer umatlas     21242 Mar  8 20:04 stderr.txt
[2026-03-08 20:04:26] HITS file was successfully produced:
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas 183864538 Mar  8 20:00 shared/HITS.pool.root.1
[2026-03-08 20:04:26]  *** Contents of shared directory: ***
[2026-03-08 20:04:26] total 611200
[2026-03-08 20:04:26] -rw-r--r--. 2 boincer umatlas 438419447 Mar  8 14:24 ATLAS.root_0
[2026-03-08 20:04:26] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 14:24 start_atlas.sh
[2026-03-08 20:04:26] -rw-r--r--. 2 boincer umatlas    597959 Mar  8 14:24 input.tar.gz
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas 183864538 Mar  8 20:00 HITS.pool.root.1
[2026-03-08 20:04:26] -rw-------. 1 boincer umatlas   2959360 Mar  8 20:04 result.tar.gz
20:04:28 (783350): run_atlas exited; CPU time 40801.142562
20:04:28 (783350): called boinc_finish(0)

</stderr_txt>
]]>

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