Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:16:38 (3024): wrapper (7.7.26015): starting
05:16:38 (3024): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 05:16:38] Arguments: --nthreads 8
[2026-03-09 05:16:38] Threads: 8
[2026-03-09 05:16:38] Checking for CVMFS
[2026-03-09 05:16:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 05:16:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 05:16:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 05:16:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 05:16:43] 2.11.2.0 23641 119882 132576 157063 0 53 17599748 25165825 96 130560 156 38440656 99.831 25436639 929 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-09 05:16:43] CVMFS is ok
[2026-03-09 05:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 05:16:43] Checking for apptainer binary...
[2026-03-09 05:16:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 05:16:43] Running /usr/bin/apptainer --version
[2026-03-09 05:16:43] apptainer version 1.3.2-1.el7
[2026-03-09 05:16:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 05:16:51] cg-vwn478.simple-grid.lan
[2026-03-09 05:16:51] apptainer works
[2026-03-09 05:16:52] Set ATHENA_PROC_NUMBER=8
[2026-03-09 05:16:52] Set ATHENA_CORE_NUMBER=8
[2026-03-09 05:16:52] Starting ATLAS job with PandaID=7045644901
[2026-03-09 05:16:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 14:55:48]  *** The last 200 lines of the pilot log: ***
[2026-03-09 14:55:48] 2026-03-09 13:55:09,831 | INFO     | total number of processed events: 400 (read)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,833 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7045644901/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,833 | INFO     | extracted standard info from prmon json
[2026-03-09 14:55:48] 2026-03-09 13:55:09,833 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 14:55:48] 2026-03-09 13:55:09,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 14:55:48] 2026-03-09 13:55:09,834 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 14:55:48] 2026-03-09 13:55:09,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 14:55:48] 2026-03-09 13:55:09,844 | INFO     | fitting pss+swap vs Time
[2026-03-09 14:55:48] 2026-03-09 13:55:09,845 | INFO     | sum of square deviations: 53874050119.5
[2026-03-09 14:55:48] 2026-03-09 13:55:09,857 | INFO     | sum of deviations: 242142190801.5
[2026-03-09 14:55:48] 2026-03-09 13:55:09,858 | INFO     | mean x: 1773047489.5
[2026-03-09 14:55:48] 2026-03-09 13:55:09,858 | INFO     | mean y: 2501292.5
[2026-03-09 14:55:48] 2026-03-09 13:55:09,858 | INFO     | intersect: -7966634173.467712
[2026-03-09 14:55:48] 2026-03-09 13:55:09,859 | INFO     | chi2: 7.916139004654651
[2026-03-09 14:55:48] 2026-03-09 13:55:09,860 | INFO     | sum of square deviations: 52438758092.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,868 | INFO     | sum of deviations: 276645716663.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,869 | INFO     | mean x: 1773047337.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,869 | INFO     | mean y: 2504929.8788426765
[2026-03-09 14:55:48] 2026-03-09 13:55:09,869 | INFO     | intersect: -9351376990.078749
[2026-03-09 14:55:48] 2026-03-09 13:55:09,870 | INFO     | chi2: 7.182066248452073
[2026-03-09 14:55:48] 2026-03-09 13:55:09,870 | INFO     | current chi2=7.182066248452073 (change=9.273116045220366 %)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,870 | INFO     | right removable region: 552
[2026-03-09 14:55:48] 2026-03-09 13:55:09,871 | INFO     | sum of square deviations: 52438758092.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,879 | INFO     | sum of deviations: 41926976829.00007
[2026-03-09 14:55:48] 2026-03-09 13:55:09,879 | INFO     | mean x: 1773047642.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,879 | INFO     | mean y: 2522559.144665461
[2026-03-09 14:55:48] 2026-03-09 13:55:09,880 | INFO     | intersect: -1415103069.449087
[2026-03-09 14:55:48] 2026-03-09 13:55:09,880 | INFO     | chi2: 3.196528293950424
[2026-03-09 14:55:48] 2026-03-09 13:55:09,881 | INFO     | current chi2=3.196528293950424 (change=59.620109095218254 %)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,881 | INFO     | sum of square deviations: 51029187477.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,890 | INFO     | sum of deviations: -87532915782.49997
[2026-03-09 14:55:48] 2026-03-09 13:55:09,890 | INFO     | mean x: 1773047794.5
[2026-03-09 14:55:48] 2026-03-09 13:55:09,890 | INFO     | mean y: 2536543.541970803
[2026-03-09 14:55:48] 2026-03-09 13:55:09,890 | INFO     | intersect: 3043934044.6146255
[2026-03-09 14:55:48] 2026-03-09 13:55:09,891 | INFO     | chi2: 1.0806494106667617
[2026-03-09 14:55:48] 2026-03-09 13:55:09,891 | INFO     | current chi2=1.0806494106667617 (change=66.19302845803242 %)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,892 | INFO     | sum of square deviations: 49645105712.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,900 | INFO     | sum of deviations: -104114219706.99998
[2026-03-09 14:55:48] 2026-03-09 13:55:09,900 | INFO     | mean x: 1773047947.0
[2026-03-09 14:55:48] 2026-03-09 13:55:09,900 | INFO     | mean y: 2538365.926335175
[2026-03-09 14:55:48] 2026-03-09 13:55:09,900 | INFO     | intersect: 3720921091.8267994
[2026-03-09 14:55:48] 2026-03-09 13:55:09,901 | INFO     | chi2: 1.0317327666967802
[2026-03-09 14:55:48] 2026-03-09 13:55:09,901 | INFO     | current chi2=1.0317327666967802 (change=4.526597015381697 %)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,901 | INFO     | left removable region: 30
[2026-03-09 14:55:48] 2026-03-09 13:55:09,902 | INFO     | sum of square deviations: 44105052070.5
[2026-03-09 14:55:48] 2026-03-09 13:55:09,910 | INFO     | sum of deviations: -24166710746.000004
[2026-03-09 14:55:48] 2026-03-09 13:55:09,910 | INFO     | mean x: 1773048221.5
[2026-03-09 14:55:48] 2026-03-09 13:55:09,910 | INFO     | mean y: 2537375.5977011495
[2026-03-09 14:55:48] 2026-03-09 13:55:09,910 | INFO     | intersect: 974052916.2484275
[2026-03-09 14:55:48] 2026-03-09 13:55:09,911 | INFO     | chi2: 0.18447842044994647
[2026-03-09 14:55:48] 2026-03-09 13:55:09,911 | INFO     | current memory leak: -0.55 B/s (using 522 data points, chi2=0.18)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,912 | INFO     | could have reported an average CPU frequency of 2249 MHz (22 samples)
[2026-03-09 14:55:48] 2026-03-09 13:55:09,912 | INFO     | ..............................
[2026-03-09 14:55:48] 2026-03-09 13:55:09,912 | INFO     | . Timing measurements:
[2026-03-09 14:55:48] 2026-03-09 13:55:09,912 | INFO     | . get job = 0 s
[2026-03-09 14:55:48] 2026-03-09 13:55:09,913 | INFO     | . initial setup = 120 s
[2026-03-09 14:55:48] 2026-03-09 13:55:09,913 | INFO     | . payload setup = 142 s
[2026-03-09 14:55:48] 2026-03-09 13:55:09,913 | INFO     | . stage-in = 0 s
[2026-03-09 14:55:48] 2026-03-09 13:55:09,913 | INFO     | . payload execution = 34139 s
[2026-03-09 14:55:48] 2026-03-09 13:55:09,913 | INFO     | . stage-out = 4 s
[2026-03-09 14:55:48] 2026-03-09 13:55:09,913 | INFO     | . log creation = 1 s
[2026-03-09 14:55:48] 2026-03-09 13:55:09,913 | INFO     | ..............................
[2026-03-09 14:55:48] 2026-03-09 13:55:10,067 | INFO     | 
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | job summary report
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | --------------------------------------------------
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | PanDA job id: 7045644901
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | task id: 48967067
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | errors: (none)
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | pilot state: finished 
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | transexitcode: 0
[2026-03-09 14:55:48] 2026-03-09 13:55:10,068 | INFO     | exeerrorcode: 0
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | exeerrordiag: 
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | exitcode: 0
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | exitmsg: OK
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | cpuconsumptiontime: 133090 s
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | nevents: 400
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | neventsw: 0
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | pid: 11429
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | pgrp: 11429
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | corecount: 8
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | event service: False
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | sizes: {0: 2279187, 1: 2279872, 2: 2280333, 12: 2280333, 34286: 2320211, 34291: 2329209, 34293: 2329393, 34294: 2329587}
[2026-03-09 14:55:48] 2026-03-09 13:55:10,069 | INFO     | --------------------------------------------------
[2026-03-09 14:55:48] 2026-03-09 13:55:10,070 | INFO     | 
[2026-03-09 14:55:48] 2026-03-09 13:55:10,070 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-09 14:55:48] 2026-03-09 13:55:10,635 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,635 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | job 7045644901 has completed (purged errors)
[2026-03-09 14:55:48] 2026-03-09 13:55:10,637 | INFO     | overall cleanup function is called
[2026-03-09 14:55:48] 2026-03-09 13:55:11,652 | INFO     | --- collectZombieJob: --- 10, [11429]
[2026-03-09 14:55:48] 2026-03-09 13:55:11,653 | INFO     | zombie collector waiting for pid 11429
[2026-03-09 14:55:48] 2026-03-09 13:55:11,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 14:55:48] 2026-03-09 13:55:11,653 | INFO     | collected zombie processes
[2026-03-09 14:55:48] 2026-03-09 13:55:11,653 | INFO     | will attempt to kill all subprocesses of pid=11429
[2026-03-09 14:55:48] 2026-03-09 13:55:11,739 | INFO     | process IDs to be killed: [11429] (in reverse order)
[2026-03-09 14:55:48] 2026-03-09 13:55:12,630 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 14:55:48] 2026-03-09 13:55:12,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 14:55:48] 2026-03-09 13:55:12,632 | INFO     | did not find any defunct processes belonging to 11429
[2026-03-09 14:55:48] 2026-03-09 13:55:12,633 | INFO     | did not find any defunct processes belonging to 11429
[2026-03-09 14:55:48] 2026-03-09 13:55:12,634 | INFO     | ready for new job
[2026-03-09 14:55:48] 2026-03-09 13:55:12,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 14:55:48] 2026-03-09 13:55:12,637 | INFO     | **************************************
[2026-03-09 14:55:48] 2026-03-09 13:55:12,637 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 14:55:48] 2026-03-09 13:55:12,637 | INFO     | **************************************
[2026-03-09 14:55:48] 2026-03-09 13:55:12,637 | INFO     | 
[2026-03-09 14:55:48] 2026-03-09 13:55:12,638 | INFO     | pilot is running in a VM
[2026-03-09 14:55:48] 2026-03-09 13:55:12,638 | INFO     | architecture information:
[2026-03-09 14:55:48] 2026-03-09 13:55:12,647 | INFO     | executing command: cat /etc/os-release
[2026-03-09 14:55:48] 2026-03-09 13:55:13,010 | INFO     | cat /etc/os-release:
[2026-03-09 14:55:48] NAME="CentOS Linux"
[2026-03-09 14:55:48] VERSION="7 (Core)"
[2026-03-09 14:55:48] ID="centos"
[2026-03-09 14:55:48] ID_LIKE="rhel fedora"
[2026-03-09 14:55:48] VERSION_ID="7"
[2026-03-09 14:55:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 14:55:48] ANSI_COLOR="0;31"
[2026-03-09 14:55:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 14:55:48] HOME_URL="https://www.centos.org/"
[2026-03-09 14:55:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 14:55:48] 
[2026-03-09 14:55:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 14:55:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 14:55:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 14:55:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 14:55:48] 
[2026-03-09 14:55:48] 2026-03-09 13:55:13,010 | INFO     | **************************************
[2026-03-09 14:55:48] 2026-03-09 13:55:13,514 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-09 14:55:48] 2026-03-09 13:55:13,756 | INFO     | sufficient remaining disk space (495623077888 B)
[2026-03-09 14:55:48] 2026-03-09 13:55:13,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 14:55:48] 2026-03-09 13:55:13,757 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 14:55:48] 2026-03-09 13:55:13,757 | INFO     | update_server=False
[2026-03-09 14:55:48] 2026-03-09 13:55:13,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 14:55:48] 2026-03-09 13:55:13,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:55:48] 2026-03-09 13:55:13,758 | INFO     | aborting loop
[2026-03-09 14:55:48] 2026-03-09 13:55:13,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 14:55:48] 2026-03-09 13:55:14,097 | INFO     | all job control threads have been joined
[2026-03-09 14:55:48] 2026-03-09 13:55:14,734 | INFO     | all data control threads have been joined
[2026-03-09 14:55:48] 2026-03-09 13:55:14,763 | INFO     | [job] retrieve thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:14,764 | INFO     | [job] job monitor thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:14,772 | INFO     | all payload control threads have been joined
[2026-03-09 14:55:48] 2026-03-09 13:55:15,016 | INFO     | [payload] validate_post thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:55:48] 2026-03-09 13:55:15,044 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,104 | INFO     | [job] control thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,128 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,134 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 14:55:48] 2026-03-09 13:55:15,503 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,741 | INFO     | [data] control thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,765 | INFO     | [data] copytool_out thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:15,779 | INFO     | [payload] control thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:16,041 | INFO     | [job] queue monitor thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:16,089 | INFO     | [data] copytool_in thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:16,116 | INFO     | [job] validate thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:16,226 | INFO     | [payload] failed_post thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:19,158 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 14:55:48] 2026-03-09 13:55:22,536 | INFO     | [monitor] cgroup control has ended
[2026-03-09 14:55:48] 2026-03-09 13:55:24,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648206657344)>', '<ExcThread(monitor, started 139647988594432)>']
[2026-03-09 14:55:48] 2026-03-09 13:55:29,437 | INFO     | all workflow threads have been joined
[2026-03-09 14:55:48] 2026-03-09 13:55:29,438 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 14:55:48] 2026-03-09 13:55:29,438 | INFO     | traces error code: 0
[2026-03-09 14:55:48] 2026-03-09 13:55:29,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 14:55:48] 2026-03-09 13:55:41,266 | INFO     | 34429s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-09 14:55:48] 2026-03-09 13:55:42,350 | INFO     | PID=6985 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-09 14:55:48] 2026-03-09 13:55:42,350 | INFO     | .. there are 2 such processes running
[2026-03-09 14:55:48] 2026-03-09 13:55:42,351 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 14:55:48] 2026-03-09 13:55:42,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 14:55:48] 2026-03-09 13:55:42,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 14:55:48] 2026-03-09 13:55:42,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 14:55:48] 2026-03-09 13:55:42,351 | CRITICAL | thread 'MainThread' is not alive
[2026-03-09 14:55:48] 2026-03-09 13:55:42,351 | INFO     | [monitor] control thread has ended
[2026-03-09 14:55:48] 2026-03-09 13:55:42,657 [wrapper] ==== pilot stdout END ====
[2026-03-09 14:55:48] 2026-03-09 13:55:42,744 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 14:55:48] 2026-03-09 13:55:42,830 [wrapper] pilotpid: 6985
[2026-03-09 14:55:48] 2026-03-09 13:55:42,897 [wrapper] Pilot exit status: 0
[2026-03-09 14:55:48] 2026-03-09 13:55:43,408 [wrapper] pandaids: 7045644901
[2026-03-09 14:55:48] 2026-03-09 13:55:44,384 [wrapper] cleanup supervisor_pilot 19842 6986
[2026-03-09 14:55:48] 2026-03-09 13:55:44,495 [wrapper] Test setup, not cleaning
[2026-03-09 14:55:48] 2026-03-09 13:55:44,617 [wrapper] apfmon messages muted
[2026-03-09 14:55:48] 2026-03-09 13:55:44,718 [wrapper] ==== wrapper stdout END ====
[2026-03-09 14:55:48] 2026-03-09 13:55:44,820 [wrapper] ==== wrapper stderr END ====
[2026-03-09 14:55:48]  *** Error codes and diagnostics ***
[2026-03-09 14:55:48]     "exeErrorCode": 0,
[2026-03-09 14:55:48]     "exeErrorDiag": "",
[2026-03-09 14:55:48]     "pilotErrorCode": 0,
[2026-03-09 14:55:48]     "pilotErrorDiag": "",
[2026-03-09 14:55:48]  *** Listing of results directory ***
[2026-03-09 14:55:48] total 517540
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc    584627 Mar  8 00:08 pilot3.tar.gz
[2026-03-09 14:55:48] -rwx------. 1 boinc boinc     36322 Mar  8 00:10 runpilot2-wrapper.sh
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc      5111 Mar  8 00:11 queuedata.json
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc       100 Mar  9 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 14:55:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 05:16 run_atlas
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc       105 Mar  9 05:16 job.xml
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc      6391 Mar  9 05:16 init_data.xml
[2026-03-09 14:55:48] -rw-r--r--. 2 boinc boinc 236209754 Mar  9 05:16 EVNT.48967065._000005.pool.root.1
[2026-03-09 14:55:48] -rw-r--r--. 2 boinc boinc     15845 Mar  9 05:16 start_atlas.sh
[2026-03-09 14:55:48] drwxrwx--x. 2 boinc boinc        68 Mar  9 05:16 shared
[2026-03-09 14:55:48] -rw-r--r--. 2 boinc boinc    597966 Mar  9 05:16 input.tar.gz
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc         0 Mar  9 05:16 boinc_lockfile
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc      2614 Mar  9 05:16 pandaJob.out
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc       415 Mar  9 05:23 workernode_map.json
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc    999108 Mar  9 05:23 agis_schedconf.cvmfs.json
[2026-03-09 14:55:48] drwx------. 5 boinc boinc      4096 Mar  9 05:23 pilot3
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc 278859841 Mar  9 14:53 HITS.48967067._000107.pool.root.1
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc       532 Mar  9 14:54 boinc_task_state.xml
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc      1015 Mar  9 14:54 memory_monitor_summary.json
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc   1511578 Mar  9 14:55 agis_ddmendpoints.agis.ALL.json
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc    729820 Mar  9 14:55 log.48967067._000107.job.log.tgz.1
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc      6313 Mar  9 14:55 heartbeat.json
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc        95 Mar  9 14:55 pilot_heartbeat.json
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc      1005 Mar  9 14:55 pilotlog.txt
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc   4758554 Mar  9 14:55 log.48967067._000107.job.log.1
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc      8192 Mar  9 14:55 boinc_mmap_file
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc       357 Mar  9 14:55 output.list
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc        29 Mar  9 14:55 wrapper_checkpoint.txt
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc       620 Mar  9 14:55 runtime_log
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc   5509120 Mar  9 14:55 result.tar.gz
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc      8816 Mar  9 14:55 runtime_log.err
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc       658 Mar  9 14:55 j61MDmnxFJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmq7ULDmJnZsWn.diag
[2026-03-09 14:55:48] -rw-r--r--. 1 boinc boinc     20718 Mar  9 14:55 stderr.txt
[2026-03-09 14:55:48] HITS file was successfully produced:
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc 278859841 Mar  9 14:53 shared/HITS.pool.root.1
[2026-03-09 14:55:48]  *** Contents of shared directory: ***
[2026-03-09 14:55:48] total 508984
[2026-03-09 14:55:48] -rw-r--r--. 2 boinc boinc 236209754 Mar  9 05:16 ATLAS.root_0
[2026-03-09 14:55:48] -rw-r--r--. 2 boinc boinc     15845 Mar  9 05:16 start_atlas.sh
[2026-03-09 14:55:48] -rw-r--r--. 2 boinc boinc    597966 Mar  9 05:16 input.tar.gz
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc 278859841 Mar  9 14:53 HITS.pool.root.1
[2026-03-09 14:55:48] -rw-------. 1 boinc boinc   5509120 Mar  9 14:55 result.tar.gz
14:55:49 (3024): run_atlas exited; CPU time 133443.548119
14:55:49 (3024): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN