Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:11:19 (1586765): wrapper (7.7.26015): starting
08:11:19 (1586765): wrapper: running run_atlas (--nthreads 2)
[2026-03-09 08:11:19] Arguments: --nthreads 2
[2026-03-09 08:11:19] Threads: 2
[2026-03-09 08:11:19] Checking for CVMFS
[2026-03-09 08:11:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 08:11:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 08:11:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 08:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 08:11:20] 2.9.2.0 838544 7690 59684 157068 2 49 26568121 36864000 0 130560 0 2168659 99.977 278679 10550 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-09 08:11:20] CVMFS is ok
[2026-03-09 08:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 08:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 08:11:20] Further information can be found at the LHC@home message board.
[2026-03-09 08:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 08:11:20] Checking for apptainer binary...
[2026-03-09 08:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 08:11:20] Running /usr/bin/apptainer --version
[2026-03-09 08:11:20] apptainer version 1.4.1-1.1
[2026-03-09 08:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 08:11:20] legendA165
[2026-03-09 08:11:20] apptainer works
[2026-03-09 08:11:20] Set ATHENA_PROC_NUMBER=2
[2026-03-09 08:11:20] Set ATHENA_CORE_NUMBER=2
[2026-03-09 08:11:20] Starting ATLAS job with PandaID=7033007711
[2026-03-09 08:11:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 10:36:56]  *** The last 200 lines of the pilot log: ***
[2026-03-09 10:36:56] 2026-03-09 09:36:37,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 10:36:56] 2026-03-09 09:36:37,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 10:36:56] 2026-03-09 09:36:37,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 10:36:56] 2026-03-09 09:36:38,437 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 10:36:56] 2026-03-09 09:36:38,437 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 10:36:56] 2026-03-09 09:36:38,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 10:36:56] 2026-03-09 09:36:38,439 | INFO     | will abort loop
[2026-03-09 10:36:56] 2026-03-09 09:36:38,772 | INFO     | all job control threads have been joined
[2026-03-09 10:36:56] 2026-03-09 09:36:38,987 | INFO     | [job] retrieve thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:38,989 | INFO     | [job] queue monitor thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,069 | INFO     | all data control threads have been joined
[2026-03-09 10:36:56] 2026-03-09 09:36:39,156 | INFO     | all payload control threads have been joined
[2026-03-09 10:36:56] 2026-03-09 09:36:39,274 | INFO     | [payload] failed_post thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,442 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,444 | INFO     | [job] job monitor thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,447 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,460 | INFO     | [job] validate thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,615 | INFO     | [data] copytool_in thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,640 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,778 | INFO     | [job] control thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,827 | INFO     | [payload] validate_post thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:39,989 | INFO     | [data] copytool_out thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:40,075 | INFO     | [data] control thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:40,162 | INFO     | [payload] control thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:41,990 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:48,380 | INFO     | job.realtimelogging is not enabled
[2026-03-09 10:36:56] 2026-03-09 09:36:49,386 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 10:36:56] 2026-03-09 09:36:50,784 | INFO     | [monitor] cgroup control has ended
[2026-03-09 10:36:56] 2026-03-09 09:36:51,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010339149632)>', '<ExcThread(monitor, started 140009474610944)>']
[2026-03-09 10:36:56] 2026-03-09 09:36:52,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 10:36:56] 2026-03-09 09:36:52,058 | INFO     | [monitor] control thread has ended
[2026-03-09 10:36:56] 2026-03-09 09:36:56,406 | INFO     | all workflow threads have been joined
[2026-03-09 10:36:56] 2026-03-09 09:36:56,406 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 10:36:56] 2026-03-09 09:36:56,406 | INFO     | traces error code: 0
[2026-03-09 10:36:56] 2026-03-09 09:36:56,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 10:36:56] 2026-03-09 09:36:56,449 [wrapper] ==== pilot stdout END ====
[2026-03-09 10:36:56] 2026-03-09 09:36:56,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 10:36:56] 2026-03-09 09:36:56,454 [wrapper] pilotpid: 1590790
[2026-03-09 10:36:56] 2026-03-09 09:36:56,456 [wrapper] Pilot exit status: 0
[2026-03-09 10:36:56] 2026-03-09 09:36:56,462 [wrapper] pandaids: 7033007711
[2026-03-09 10:36:56] 2026-03-09 09:36:56,474 [wrapper] cleanup supervisor_pilot 1600147 1590791
[2026-03-09 10:36:56] 2026-03-09 09:36:56,476 [wrapper] Test setup, not cleaning
[2026-03-09 10:36:56] 2026-03-09 09:36:56,478 [wrapper] apfmon messages muted
[2026-03-09 10:36:56] 2026-03-09 09:36:56,480 [wrapper] ==== wrapper stdout END ====
[2026-03-09 10:36:56] 2026-03-09 09:36:56,482 [wrapper] ==== wrapper stderr END ====
[2026-03-09 10:36:56]  *** Error codes and diagnostics ***
[2026-03-09 10:36:56]     "exeErrorCode": 0,
[2026-03-09 10:36:56]     "exeErrorDiag": "",
[2026-03-09 10:36:56]     "pilotErrorCode": 0,
[2026-03-09 10:36:56]     "pilotErrorDiag": "",
[2026-03-09 10:36:56]  *** Listing of results directory ***
[2026-03-09 10:36:56] total 429164
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc    584627 Feb 28 13:40 pilot3.tar.gz
[2026-03-09 10:36:56] -rwx------ 1 boinc boinc     36322 Feb 28 13:44 runpilot2-wrapper.sh
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc      5111 Feb 28 13:47 queuedata.json
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc       100 Mar  9 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 10:36:56] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 08:11 run_atlas
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc       105 Mar  9 08:11 job.xml
[2026-03-09 10:36:56] -rw-r--r-- 2 boinc boinc 255519080 Mar  9 08:11 EVNT.48451352._000003.pool.root.1
[2026-03-09 10:36:56] -rw-r--r-- 2 boinc boinc    597977 Mar  9 08:11 input.tar.gz
[2026-03-09 10:36:56] -rw-r--r-- 2 boinc boinc     15845 Mar  9 08:11 start_atlas.sh
[2026-03-09 10:36:56] drwxrwx--x 2 boinc boinc      4096 Mar  9 08:11 shared
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc         0 Mar  9 08:11 boinc_setup_complete
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc      6209 Mar  9 08:11 init_data.xml
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc         0 Mar  9 08:11 boinc_lockfile
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc      2625 Mar  9 08:11 pandaJob.out
[2026-03-09 10:36:56] -rw------- 1 boinc boinc    999108 Mar  9 08:11 agis_schedconf.cvmfs.json
[2026-03-09 10:36:56] -rw------- 1 boinc boinc   1511578 Mar  9 08:11 agis_ddmendpoints.agis.ALL.json
[2026-03-09 10:36:56] -rw------- 1 boinc boinc       422 Mar  9 08:11 workernode_map.json
[2026-03-09 10:36:56] drwx------ 5 boinc boinc      4096 Mar  9 08:11 pilot3
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc       529 Mar  9 10:36 boinc_task_state.xml
[2026-03-09 10:36:56] -rw------- 1 boinc boinc 176955806 Mar  9 10:36 HITS.48843598._000066.pool.root.1
[2026-03-09 10:36:56] -rw------- 1 boinc boinc      1017 Mar  9 10:36 memory_monitor_summary.json
[2026-03-09 10:36:56] -rw------- 1 boinc boinc        95 Mar  9 10:36 pilot_heartbeat.json
[2026-03-09 10:36:56] -rw------- 1 boinc boinc    296592 Mar  9 10:36 log.48843598._000066.job.log.tgz.1
[2026-03-09 10:36:56] -rw------- 1 boinc boinc      6298 Mar  9 10:36 heartbeat.json
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc      8192 Mar  9 10:36 boinc_mmap_file
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc        27 Mar  9 10:36 wrapper_checkpoint.txt
[2026-03-09 10:36:56] -rw------- 1 boinc boinc      4810 Mar  9 10:36 pilotlog.txt
[2026-03-09 10:36:56] -rw------- 1 boinc boinc   1240053 Mar  9 10:36 log.48843598._000066.job.log.1
[2026-03-09 10:36:56] -rw------- 1 boinc boinc       357 Mar  9 10:36 output.list
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc       620 Mar  9 10:36 runtime_log
[2026-03-09 10:36:56] -rw------- 1 boinc boinc   1556480 Mar  9 10:36 result.tar.gz
[2026-03-09 10:36:56] -rw------- 1 boinc boinc       662 Mar  9 10:36 tHlLDmQrYG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcC7KDmQhIqjm.diag
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc      8916 Mar  9 10:36 runtime_log.err
[2026-03-09 10:36:56] -rw-r--r-- 1 boinc boinc      6968 Mar  9 10:36 stderr.txt
[2026-03-09 10:36:56] HITS file was successfully produced:
[2026-03-09 10:36:56] -rw------- 1 boinc boinc 176955806 Mar  9 10:36 shared/HITS.pool.root.1
[2026-03-09 10:36:56]  *** Contents of shared directory: ***
[2026-03-09 10:36:56] total 424472
[2026-03-09 10:36:56] -rw-r--r-- 2 boinc boinc 255519080 Mar  9 08:11 ATLAS.root_0
[2026-03-09 10:36:56] -rw-r--r-- 2 boinc boinc    597977 Mar  9 08:11 input.tar.gz
[2026-03-09 10:36:56] -rw-r--r-- 2 boinc boinc     15845 Mar  9 08:11 start_atlas.sh
[2026-03-09 10:36:56] -rw------- 1 boinc boinc 176955806 Mar  9 10:36 HITS.pool.root.1
[2026-03-09 10:36:56] -rw------- 1 boinc boinc   1556480 Mar  9 10:36 result.tar.gz
10:37:18 (1586765): run_atlas exited; CPU time 16948.842610
10:37:18 (1586765): called boinc_finish(0)

</stderr_txt>
]]>

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