Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:22:06 (997730): wrapper (7.7.26015): starting
21:22:06 (997730): wrapper: running run_atlas (--nthreads 12)
[2026-03-08 21:22:06] Arguments: --nthreads 12
[2026-03-08 21:22:06] Threads: 12
[2026-03-08 21:22:06] Checking for CVMFS
[2026-03-08 21:22:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 21:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 21:22:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 21:22:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 21:22:07] 2.12.7.0 991347 16553 72808 157060 2 132 3276112 4194304 1814 130560 0 38595355 99.997 594564 1870 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-08 21:22:07] CVMFS is ok
[2026-03-08 21:22:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 21:22:07] Checking for apptainer binary...
[2026-03-08 21:22:07] apptainer is not installed, using version from CVMFS
[2026-03-08 21:22:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 21:22:07] Trebeth
[2026-03-08 21:22:07] apptainer works
[2026-03-08 21:22:07] Set ATHENA_PROC_NUMBER=12
[2026-03-08 21:22:07] Set ATHENA_CORE_NUMBER=12
[2026-03-08 21:22:07] Starting ATLAS job with PandaID=7032912002
[2026-03-08 21:22:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 22:27:33]  *** The last 200 lines of the pilot log: ***
[2026-03-08 22:27:33]  scope=mc23_13p6TeV
[2026-03-08 22:27:33]  status=None
[2026-03-08 22:27:33]  status_code=0
[2026-03-08 22:27:33]  storage_token=
[2026-03-08 22:27:33]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-7032912002/log.48838476._000496.job.log.tgz.1
[2026-03-08 22:27:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/30/log.48838476._000496.job.log.tgz.1
[2026-03-08 22:27:33]  workdir=None
[2026-03-08 22:27:33] ]
[2026-03-08 22:27:33] 2026-03-09 02:26:55,168 | INFO     | transferring file log.48838476._000496.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-7032912002/log.48838476._000496.job.log.tgz.1 to /var/lib/boinc
[2026-03-08 22:27:33] 2026-03-09 02:26:55,168 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-7032912002/log.48838476._000496.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.488384
[2026-03-08 22:27:33] 2026-03-09 02:26:55,183 | INFO     | adding to output.list: log.48838476._000496.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/30/log.48838476._000496.job.log.tg
[2026-03-08 22:27:33] 2026-03-09 02:26:55,184 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 22:27:33] 2026-03-09 02:26:55,184 | INFO     | summary of transferred files:
[2026-03-08 22:27:33] 2026-03-09 02:26:55,184 | INFO     |  -- lfn=log.48838476._000496.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 22:27:33] 2026-03-09 02:26:55,185 | INFO     | stage-out finished correctly
[2026-03-08 22:27:33] 2026-03-09 02:26:55,371 | INFO     | time since job start (3874s) is within the limit (349056.0s)
[2026-03-08 22:27:33] 2026-03-09 02:26:55,772 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 22:27:33] 2026-03-09 02:26:56,291 | INFO     | job 7032912002 has state=finished
[2026-03-08 22:27:33] 2026-03-09 02:26:56,291 | INFO     | preparing for final server update for job 7032912002 in state='finished'
[2026-03-08 22:27:33] 2026-03-09 02:26:56,292 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-7032912002/jobReport.json
[2026-03-08 22:27:33] 2026-03-09 02:26:56,295 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-03-08 22:27:33] 2026-03-09 02:26:56,296 | INFO     | this job has now completed (state=finished)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,296 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,296 | INFO     | log transfer has been attempted: DONE
[2026-03-08 22:27:33] 2026-03-09 02:26:56,296 | INFO     | job 7032912002 has finished - writing final server update
[2026-03-08 22:27:33] 2026-03-09 02:26:56,297 | INFO     | total number of processed events: 400 (read)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,329 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-7032912002/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,329 | INFO     | extracted standard info from prmon json
[2026-03-08 22:27:33] 2026-03-09 02:26:56,330 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 22:27:33] 2026-03-09 02:26:56,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 22:27:33] 2026-03-09 02:26:56,330 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 22:27:33] 2026-03-09 02:26:56,330 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 22:27:33] 2026-03-09 02:26:56,332 | INFO     | fitting pss+swap vs Time
[2026-03-08 22:27:33] 2026-03-09 02:26:56,333 | INFO     | sum of square deviations: 57407588.0
[2026-03-08 22:27:33] 2026-03-09 02:26:56,333 | INFO     | sum of deviations: 2455721225.0
[2026-03-08 22:27:33] 2026-03-09 02:26:56,333 | INFO     | mean x: 1773021374.0
[2026-03-08 22:27:33] 2026-03-09 02:26:56,333 | INFO     | mean y: 2810004.8421052634
[2026-03-08 22:27:33] 2026-03-09 02:26:56,333 | INFO     | intersect: -75841627502.45158
[2026-03-08 22:27:33] 2026-03-09 02:26:56,334 | INFO     | chi2: 0.1716892199233118
[2026-03-08 22:27:33] 2026-03-09 02:26:56,334 | INFO     | current memory leak: 42.78 B/s (using 57 data points, chi2=0.17)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,334 | INFO     | could have reported an average CPU frequency of 1345 MHz (6 samples)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,334 | INFO     | ..............................
[2026-03-08 22:27:33] 2026-03-09 02:26:56,334 | INFO     | . Timing measurements:
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | . get job = 0 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | . initial setup = 6 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | . payload setup = 4 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | . stage-in = 0 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | . payload execution = 3853 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | . stage-out = 0 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | . log creation = 0 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,335 | INFO     | ..............................
[2026-03-08 22:27:33] 2026-03-09 02:26:56,428 | INFO     | 
[2026-03-08 22:27:33] 2026-03-09 02:26:56,428 | INFO     | job summary report
[2026-03-08 22:27:33] 2026-03-09 02:26:56,428 | INFO     | --------------------------------------------------
[2026-03-08 22:27:33] 2026-03-09 02:26:56,428 | INFO     | PanDA job id: 7032912002
[2026-03-08 22:27:33] 2026-03-09 02:26:56,428 | INFO     | task id: 48838476
[2026-03-08 22:27:33] 2026-03-09 02:26:56,428 | INFO     | errors: (none)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,428 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | pilot state: finished 
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | transexitcode: 0
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | exeerrorcode: 0
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | exeerrordiag: 
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | exitcode: 0
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | exitmsg: OK
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | cpuconsumptiontime: 40091 s
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | nevents: 400
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | neventsw: 0
[2026-03-08 22:27:33] 2026-03-09 02:26:56,429 | INFO     | pid: 1015546
[2026-03-08 22:27:33] 2026-03-09 02:26:56,430 | INFO     | pgrp: 1015546
[2026-03-08 22:27:33] 2026-03-09 02:26:56,430 | INFO     | corecount: 12
[2026-03-08 22:27:33] 2026-03-09 02:26:56,430 | INFO     | event service: False
[2026-03-08 22:27:33] 2026-03-09 02:26:56,430 | INFO     | sizes: {0: 2279775, 1: 2280236, 11: 2280236, 3862: 2306080, 3863: 2315092, 3864: 2315470}
[2026-03-08 22:27:33] 2026-03-09 02:26:56,430 | INFO     | --------------------------------------------------
[2026-03-08 22:27:33] 2026-03-09 02:26:56,430 | INFO     | 
[2026-03-08 22:27:33] 2026-03-09 02:26:56,430 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-08 22:27:33] 2026-03-09 02:26:56,447 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,447 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,447 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,447 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,448 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,449 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 22:27:33] 2026-03-09 02:26:56,449 | INFO     | job 7032912002 has completed (purged errors)
[2026-03-08 22:27:33] 2026-03-09 02:26:56,449 | INFO     | overall cleanup function is called
[2026-03-08 22:27:33] 2026-03-09 02:26:57,457 | INFO     | --- collectZombieJob: --- 10, [1015546]
[2026-03-08 22:27:33] 2026-03-09 02:26:57,457 | INFO     | zombie collector waiting for pid 1015546
[2026-03-08 22:27:33] 2026-03-09 02:26:57,458 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 22:27:33] 2026-03-09 02:26:57,458 | INFO     | collected zombie processes
[2026-03-08 22:27:33] 2026-03-09 02:26:57,458 | INFO     | will attempt to kill all subprocesses of pid=1015546
[2026-03-08 22:27:33] 2026-03-09 02:26:57,686 | INFO     | process IDs to be killed: [1015546] (in reverse order)
[2026-03-08 22:27:33] 2026-03-09 02:26:57,757 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 22:27:33] 2026-03-09 02:26:57,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 22:27:33] 2026-03-09 02:26:57,764 | INFO     | did not find any defunct processes belonging to 1015546
[2026-03-08 22:27:33] 2026-03-09 02:26:57,769 | INFO     | did not find any defunct processes belonging to 1015546
[2026-03-08 22:27:33] 2026-03-09 02:26:57,770 | INFO     | ready for new job
[2026-03-08 22:27:33] 2026-03-09 02:26:57,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 22:27:33] 2026-03-09 02:26:57,772 | INFO     | **************************************
[2026-03-08 22:27:33] 2026-03-09 02:26:57,772 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 22:27:33] 2026-03-09 02:26:57,772 | INFO     | **************************************
[2026-03-08 22:27:33] 2026-03-09 02:26:57,772 | INFO     | 
[2026-03-08 22:27:33] 2026-03-09 02:26:57,794 | INFO     | architecture information:
[2026-03-08 22:27:33] 2026-03-09 02:26:57,794 | INFO     | executing command: cat /etc/os-release
[2026-03-08 22:27:33] 2026-03-09 02:26:57,807 | INFO     | cat /etc/os-release:
[2026-03-08 22:27:33] NAME="CentOS Linux"
[2026-03-08 22:27:33] VERSION="7 (Core)"
[2026-03-08 22:27:33] ID="centos"
[2026-03-08 22:27:33] ID_LIKE="rhel fedora"
[2026-03-08 22:27:33] VERSION_ID="7"
[2026-03-08 22:27:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 22:27:33] ANSI_COLOR="0;31"
[2026-03-08 22:27:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 22:27:33] HOME_URL="https://www.centos.org/"
[2026-03-08 22:27:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 22:27:33] 
[2026-03-08 22:27:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 22:27:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 22:27:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 22:27:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 22:27:33] 
[2026-03-08 22:27:33] 2026-03-09 02:26:57,807 | INFO     | **************************************
[2026-03-08 22:27:33] 2026-03-09 02:26:58,310 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-08 22:27:33] 2026-03-09 02:26:58,325 | INFO     | sufficient remaining disk space (395696930816 B)
[2026-03-08 22:27:33] 2026-03-09 02:26:58,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 22:27:33] 2026-03-09 02:26:58,326 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 22:27:33] 2026-03-09 02:26:58,326 | INFO     | update_server=False
[2026-03-08 22:27:33] 2026-03-09 02:26:58,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 22:27:33] 2026-03-09 02:26:58,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 22:27:33] 2026-03-09 02:26:58,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 22:27:33] 2026-03-09 02:26:58,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 22:27:33] 2026-03-09 02:26:58,695 | INFO     | all data control threads have been joined
[2026-03-08 22:27:33] 2026-03-09 02:26:58,897 | INFO     | all job control threads have been joined
[2026-03-08 22:27:33] 2026-03-09 02:26:59,304 | INFO     | all payload control threads have been joined
[2026-03-08 22:27:33] 2026-03-09 02:26:59,331 | INFO     | [job] retrieve thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:26:59,332 | INFO     | [job] queue monitor thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:26:59,701 | INFO     | [data] control thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:26:59,841 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:26:59,903 | INFO     | [job] control thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:26:59,954 | WARNING  | process 1015546 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 22:27:33] 2026-03-09 02:27:00,059 | INFO     | [job] validate thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:00,150 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 22:27:33] 2026-03-09 02:27:00,151 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 22:27:33] 2026-03-09 02:27:00,151 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-08 22:27:33] 2026-03-09 02:27:00,152 | WARNING  | maxPSS not found in memory monitor output
[2026-03-08 22:27:33] 2026-03-09 02:27:00,152 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/3/PanDA_Pilot-7032912002/payload.stdout) since it has not been created yet
[2026-03-08 22:27:33] 2026-03-09 02:27:00,152 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-08 22:27:33] 2026-03-09 02:27:00,168 | INFO     | sufficient remaining disk space (395696930816 B)
[2026-03-08 22:27:33] 2026-03-09 02:27:00,168 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-08 22:27:33] 2026-03-09 02:27:00,168 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/3/PanDA_Pilot-7032912002/HITS.48838476._000496.pool.root.1 since it does not exist
[2026-03-08 22:27:33] 2026-03-09 02:27:00,211 | INFO     | [payload] validate_post thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:00,291 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:00,307 | INFO     | [payload] control thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:00,330 | INFO     | [data] copytool_out thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:00,403 | INFO     | number of running child processes to parent process 1015546: 1
[2026-03-08 22:27:33] 2026-03-09 02:27:00,403 | INFO     | maximum number of monitored processes: 6
[2026-03-08 22:27:33] 2026-03-09 02:27:00,404 | INFO     | aborting job monitoring since job object (job id=7032912002) has expired
[2026-03-08 22:27:33] 2026-03-09 02:27:00,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 22:27:33] 2026-03-09 02:27:00,404 | INFO     | will abort loop
[2026-03-08 22:27:33] 2026-03-09 02:27:00,603 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:00,606 | INFO     | [data] copytool_in thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:00,705 | INFO     | [payload] failed_post thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:01,409 | INFO     | [job] job monitor thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:02,333 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:08,642 | INFO     | job.realtimelogging is not enabled
[2026-03-08 22:27:33] 2026-03-09 02:27:09,646 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 22:27:33] 2026-03-09 02:27:26,819 | INFO     | [monitor] cgroup control has ended
[2026-03-08 22:27:33] 2026-03-09 02:27:28,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624221984576)>', '<ExcThread(monitor, started 140623763973888)>']
[2026-03-08 22:27:33] 2026-03-09 02:27:28,726 | INFO     | PID=1003592 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 22:27:33] 2026-03-09 02:27:28,726 | INFO     | .. there are 4 such processes running
[2026-03-08 22:27:33] 2026-03-09 02:27:28,727 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 22:27:33] 2026-03-09 02:27:28,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 22:27:33] 2026-03-09 02:27:28,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 22:27:33] 2026-03-09 02:27:28,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 22:27:33] 2026-03-09 02:27:28,727 | INFO     | [monitor] control thread has ended
[2026-03-08 22:27:33] 2026-03-09 02:27:33,374 | INFO     | all workflow threads have been joined
[2026-03-08 22:27:33] 2026-03-09 02:27:33,374 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 22:27:33] 2026-03-09 02:27:33,375 | INFO     | traces error code: 0
[2026-03-08 22:27:33] 2026-03-09 02:27:33,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 22:27:33] 2026-03-09 02:27:33,478 [wrapper] ==== pilot stdout END ====
[2026-03-08 22:27:33] 2026-03-09 02:27:33,480 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 22:27:33] 2026-03-09 02:27:33,482 [wrapper] pilotpid: 1003592
[2026-03-08 22:27:33] 2026-03-09 02:27:33,484 [wrapper] Pilot exit status: 0
[2026-03-08 22:27:33] 2026-03-09 02:27:33,492 [wrapper] pandaids: 7032912002
[2026-03-08 22:27:33] 2026-03-09 02:27:33,536 [wrapper] cleanup supervisor_pilot 1059508 1003593
[2026-03-08 22:27:33] 2026-03-09 02:27:33,538 [wrapper] Test setup, not cleaning
[2026-03-08 22:27:33] 2026-03-09 02:27:33,540 [wrapper] apfmon messages muted
[2026-03-08 22:27:33] 2026-03-09 02:27:33,542 [wrapper] ==== wrapper stdout END ====
[2026-03-08 22:27:33] 2026-03-09 02:27:33,544 [wrapper] ==== wrapper stderr END ====
[2026-03-08 22:27:33]  *** Error codes and diagnostics ***
[2026-03-08 22:27:33]     "exeErrorCode": 0,
[2026-03-08 22:27:33]     "exeErrorDiag": "",
[2026-03-08 22:27:33]     "pilotErrorCode": 0,
[2026-03-08 22:27:33]     "pilotErrorDiag": "",
[2026-03-08 22:27:33]  *** Listing of results directory ***
[2026-03-08 22:27:33] total 482644
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc      5111 Feb 28 03:11 queuedata.json
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc    584627 Feb 28 03:11 pilot3.tar.gz
[2026-03-08 22:27:33] -rwx------ 1 boinc boinc     36322 Feb 28 03:11 runpilot2-wrapper.sh
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc       100 Mar  8 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 22:27:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 21:22 run_atlas
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc       105 Mar  8 21:22 job.xml
[2026-03-08 22:27:33] -rw-r--r-- 2 boinc boinc     15845 Mar  8 21:22 start_atlas.sh
[2026-03-08 22:27:33] drwxrwx--x 2 boinc boinc      4096 Mar  8 21:22 shared
[2026-03-08 22:27:33] -rw-r--r-- 2 boinc boinc    597977 Mar  8 21:22 input.tar.gz
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc      7579 Mar  8 21:22 init_data.xml
[2026-03-08 22:27:33] -rw-r--r-- 2 boinc boinc 280868554 Mar  8 21:22 EVNT.48220149._000020.pool.root.1
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc         0 Mar  8 21:22 boinc_lockfile
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc      2584 Mar  8 21:22 pandaJob.out
[2026-03-08 22:27:33] -rw------- 1 boinc boinc        50 Mar  8 21:22 setup.sh.local
[2026-03-08 22:27:33] -rw------- 1 boinc boinc    999108 Mar  8 21:22 agis_schedconf.cvmfs.json
[2026-03-08 22:27:33] -rw------- 1 boinc boinc   1511578 Mar  8 21:22 agis_ddmendpoints.agis.ALL.json
[2026-03-08 22:27:33] -rw------- 1 boinc boinc       429 Mar  8 21:22 workernode_map.json
[2026-03-08 22:27:33] drwx------ 5 boinc boinc      4096 Mar  8 21:22 pilot3
[2026-03-08 22:27:33] -rw------- 1 boinc boinc 207516425 Mar  8 22:26 HITS.48838476._000496.pool.root.1
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc       529 Mar  8 22:26 boinc_task_state.xml
[2026-03-08 22:27:33] -rw------- 1 boinc boinc      1030 Mar  8 22:26 memory_monitor_summary.json
[2026-03-08 22:27:33] -rw------- 1 boinc boinc    362324 Mar  8 22:26 log.48838476._000496.job.log.tgz.1
[2026-03-08 22:27:33] -rw------- 1 boinc boinc      6323 Mar  8 22:26 heartbeat.json
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc        27 Mar  8 22:27 wrapper_checkpoint.txt
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc      8192 Mar  8 22:27 boinc_mmap_file
[2026-03-08 22:27:33] -rw------- 1 boinc boinc        95 Mar  8 22:27 pilot_heartbeat.json
[2026-03-08 22:27:33] -rw------- 1 boinc boinc      6420 Mar  8 22:27 pilotlog.txt
[2026-03-08 22:27:33] -rw------- 1 boinc boinc    588734 Mar  8 22:27 log.48838476._000496.job.log.1
[2026-03-08 22:27:33] -rw------- 1 boinc boinc       357 Mar  8 22:27 output.list
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc       620 Mar  8 22:27 runtime_log
[2026-03-08 22:27:33] -rw------- 1 boinc boinc    972800 Mar  8 22:27 result.tar.gz
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc      9403 Mar  8 22:27 runtime_log.err
[2026-03-08 22:27:33] -rw------- 1 boinc boinc       650 Mar  8 22:27 H6RKDmUbUG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUd6KDmIWW9Hn.diag
[2026-03-08 22:27:33] -rw-r--r-- 1 boinc boinc     21865 Mar  8 22:27 stderr.txt
[2026-03-08 22:27:33] HITS file was successfully produced:
[2026-03-08 22:27:33] -rw------- 1 boinc boinc 207516425 Mar  8 22:26 shared/HITS.pool.root.1
[2026-03-08 22:27:33]  *** Contents of shared directory: ***
[2026-03-08 22:27:33] total 478504
[2026-03-08 22:27:33] -rw-r--r-- 2 boinc boinc     15845 Mar  8 21:22 start_atlas.sh
[2026-03-08 22:27:33] -rw-r--r-- 2 boinc boinc    597977 Mar  8 21:22 input.tar.gz
[2026-03-08 22:27:33] -rw-r--r-- 2 boinc boinc 280868554 Mar  8 21:22 ATLAS.root_0
[2026-03-08 22:27:33] -rw------- 1 boinc boinc 207516425 Mar  8 22:26 HITS.pool.root.1
[2026-03-08 22:27:33] -rw------- 1 boinc boinc    972800 Mar  8 22:27 result.tar.gz
22:27:35 (997730): run_atlas exited; CPU time 40163.201636
22:27:35 (997730): called boinc_finish(0)

</stderr_txt>
]]>

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