Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:27:39 (1073253): wrapper (7.7.26015): starting
12:27:39 (1073253): wrapper: running run_atlas (--nthreads 12)
[2026-03-08 12:27:39] Arguments: --nthreads 12
[2026-03-08 12:27:39] Threads: 12
[2026-03-08 12:27:39] Checking for CVMFS
[2026-03-08 12:27:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 12:27:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 12:27:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 12:27:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 12:27:40] 2.11.5.0 1525032 140496 137924 157051 1 429 39089486 45568000 17616 130560 0 1266795660 99.833 725716278 21006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-08 12:27:40] CVMFS is ok
[2026-03-08 12:27:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 12:27:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 12:27:40] Further information can be found at the LHC@home message board.
[2026-03-08 12:27:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 12:27:40] Checking for apptainer binary...
[2026-03-08 12:27:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 12:27:40] Running /usr/bin/apptainer --version
[2026-03-08 12:27:40] apptainer version 1.4.1-1.el9
[2026-03-08 12:27:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 12:27:41] wns0053.triumf.lcg
[2026-03-08 12:27:41] apptainer works
[2026-03-08 12:27:41] Set ATHENA_PROC_NUMBER=12
[2026-03-08 12:27:41] Set ATHENA_CORE_NUMBER=12
[2026-03-08 12:27:41] Starting ATLAS job with PandaID=7046355548
[2026-03-08 12:27:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 12:32:32]  *** The last 200 lines of the pilot log: ***
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | wrong length of table data, x=[1772998151.0], y=[3630.0] (must be same and length>=4)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | ..............................
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | . Timing measurements:
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . get job = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . initial setup = 18 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . payload setup = 17 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . stage-in = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . payload execution = 41 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . stage-out = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . log creation = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | ..............................
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-08 12:32:32] 2026-03-08 19:31:41,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7046355548/pilotlog.txt
[2026-03-08 12:32:32] 2026-03-08 19:31:41,901 | INFO     | time since job start (195s) is within the limit (349056.0s)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,985 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-08 12:32:32] - Log from pilotlog.txt -
[2026-03-08 12:32:32] 2026-03-08 19:31:41,675 | INFO     | extracted standard info from prmon json
[2026-03-08 12:32:32] 2026-03-08 19:31:41,675 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 12:32:32] 2026-03-08 19:31:41,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | wrong length of table data, x=[1772998151.0], y=[3630.0] (must be same and length>=4)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | ..............................
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | . Timing measurements:
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . get job = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . initial setup = 18 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . payload setup = 17 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . stage-in = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . payload execution = 41 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . stage-out = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . log creation = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | ..............................
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-08 12:32:32] 2026-03-08 19:31:41,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7046355548/pilotlog.txt
[2026-03-08 12:32:32] 2026-03-08 19:31:41,901 | INFO     | time since job start (195s) is within the limit (349056.0s)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,985 | WARNING  | 
[2026-03-08 12:32:32] [begin log extracts]
[2026-03-08 12:32:32] - Log from pilotlog.txt -
[2026-03-08 12:32:32] 2026-03-08 19:31:41,675 | INFO     | extracted standard info from prmon json
[2026-03-08 12:32:32] 2026-03-08 19:31:41,675 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 12:32:32] 2026-03-08 19:31:41,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 12:32:32] 2026-03-08 19:31:41,676 | WARNING  | wrong length of table data, x=[1772998151.0], y=[3630.0] (must be same and length>=4)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | ..............................
[2026-03-08 12:32:32] 2026-03-08 19:31:41,677 | INFO     | . Timing measurements:
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . get job = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . initial setup = 18 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . payload setup = 17 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . stage-in = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . payload execution = 41 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . stage-out = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | . log creation = 0 s
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | ..............................
[2026-03-08 12:32:32] 2026-03-08 19:31:41,689 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-08 12:32:32] 2026-03-08 19:31:41,690 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7046355548/pilotlog.txt
[2026-03-08 12:32:32] 2026-03-08 19:31:41,901 | INFO     | time since job start (195s) is within the limit (349056.0s)
[2026-03-08 12:32:32] [end log extracts]
[2026-03-08 12:32:32] 2026-03-08 19:31:41,985 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-08 12:32:32] 2026-03-08 19:31:41,986 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | 
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | job summary report
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | --------------------------------------------------
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | PanDA job id: 7046355548
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | task id: 48966988
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-08 12:29:33,318 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | pilot state: failed 
[2026-03-08 12:32:32] 2026-03-08 19:31:42,785 | INFO     | transexitcode: 65
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | exeerrorcode: 65
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | exitcode: 65
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | cpuconsumptiontime: 13 s
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | nevents: 0
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | neventsw: 0
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | pid: 1081659
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | pgrp: 1081659
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | corecount: 12
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | event service: False
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | sizes: {0: 2279835, 1: 2279835, 2: 2280324, 13: 2280324, 62: 2303535, 63: 2307827, 65: 2307983, 182: 2308149}
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | --------------------------------------------------
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | 
[2026-03-08 12:32:32] 2026-03-08 19:31:42,786 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-08 12:32:32] 2026-03-08 19:31:43,076 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 12:32:32] 2026-03-08 19:31:43,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,078 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 12:32:32] 2026-03-08 19:31:43,078 | INFO     | job 7046355548 has completed (purged errors)
[2026-03-08 12:32:32] 2026-03-08 19:31:43,078 | INFO     | overall cleanup function is called
[2026-03-08 12:32:32] 2026-03-08 19:31:44,085 | INFO     | --- collectZombieJob: --- 10, [1081659]
[2026-03-08 12:32:32] 2026-03-08 19:31:44,085 | INFO     | zombie collector waiting for pid 1081659
[2026-03-08 12:32:32] 2026-03-08 19:31:44,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 12:32:32] 2026-03-08 19:31:44,085 | INFO     | collected zombie processes
[2026-03-08 12:32:32] 2026-03-08 19:31:44,085 | INFO     | will attempt to kill all subprocesses of pid=1081659
[2026-03-08 12:32:32] 2026-03-08 19:31:44,387 | INFO     | process IDs to be killed: [1081659] (in reverse order)
[2026-03-08 12:32:32] 2026-03-08 19:31:44,649 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 12:32:32] 2026-03-08 19:31:44,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 12:32:32] 2026-03-08 19:31:44,662 | INFO     | did not find any defunct processes belonging to 1081659
[2026-03-08 12:32:32] 2026-03-08 19:31:44,670 | INFO     | did not find any defunct processes belonging to 1081659
[2026-03-08 12:32:32] 2026-03-08 19:31:44,670 | INFO     | ready for new job
[2026-03-08 12:32:32] 2026-03-08 19:31:44,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 12:32:32] 2026-03-08 19:31:44,671 | INFO     | **************************************
[2026-03-08 12:32:32] 2026-03-08 19:31:44,672 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 12:32:32] 2026-03-08 19:31:44,672 | INFO     | **************************************
[2026-03-08 12:32:32] 2026-03-08 19:31:44,672 | INFO     | 
[2026-03-08 12:32:32] 2026-03-08 19:31:44,673 | INFO     | architecture information:
[2026-03-08 12:32:32] 2026-03-08 19:31:44,674 | INFO     | executing command: cat /etc/os-release
[2026-03-08 12:32:32] 2026-03-08 19:31:44,686 | INFO     | cat /etc/os-release:
[2026-03-08 12:32:32] NAME="CentOS Linux"
[2026-03-08 12:32:32] VERSION="7 (Core)"
[2026-03-08 12:32:32] ID="centos"
[2026-03-08 12:32:32] ID_LIKE="rhel fedora"
[2026-03-08 12:32:32] VERSION_ID="7"
[2026-03-08 12:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 12:32:32] ANSI_COLOR="0;31"
[2026-03-08 12:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 12:32:32] HOME_URL="https://www.centos.org/"
[2026-03-08 12:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 12:32:32] 
[2026-03-08 12:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 12:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 12:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 12:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 12:32:32] 
[2026-03-08 12:32:32] 2026-03-08 19:31:44,686 | INFO     | **************************************
[2026-03-08 12:32:32] 2026-03-08 19:31:45,191 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-08 12:32:32] 2026-03-08 19:31:45,204 | INFO     | sufficient remaining disk space (2138235207680 B)
[2026-03-08 12:32:32] 2026-03-08 19:31:45,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 12:32:32] 2026-03-08 19:31:45,204 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 12:32:32] 2026-03-08 19:31:45,204 | INFO     | update_server=False
[2026-03-08 12:32:32] 2026-03-08 19:31:45,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 12:32:32] 2026-03-08 19:31:45,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 12:32:32] 2026-03-08 19:31:45,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 12:32:32] 2026-03-08 19:31:45,205 | INFO     | aborting loop
[2026-03-08 12:32:32] 2026-03-08 19:31:45,949 | INFO     | all data control threads have been joined
[2026-03-08 12:32:32] 2026-03-08 19:31:45,959 | INFO     | all payload control threads have been joined
[2026-03-08 12:32:32] 2026-03-08 19:31:46,210 | INFO     | [job] retrieve thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:46,214 | INFO     | [job] job monitor thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:46,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:46,594 | INFO     | [job] validate thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:46,891 | INFO     | all job control threads have been joined
[2026-03-08 12:32:32] 2026-03-08 19:31:46,955 | INFO     | [data] control thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:46,965 | INFO     | [payload] control thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,066 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,211 | INFO     | [data] copytool_out thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,243 | INFO     | [payload] failed_post thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,329 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,336 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 12:32:32] 2026-03-08 19:31:47,639 | INFO     | [payload] validate_post thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,658 | INFO     | [data] copytool_in thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:47,897 | INFO     | [job] control thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:48,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 12:32:32] 2026-03-08 19:31:48,413 | INFO     | [job] queue monitor thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:31:52,228 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 12:32:32] 2026-03-08 19:32:15,812 | INFO     | PID=1076976 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 12:32:32] 2026-03-08 19:32:15,813 | INFO     | .. there are 28 such processes running
[2026-03-08 12:32:32] 2026-03-08 19:32:15,814 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 12:32:32] 2026-03-08 19:32:15,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 12:32:32] 2026-03-08 19:32:15,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 12:32:32] 2026-03-08 19:32:25,703 | INFO     | [monitor] cgroup control has ended
[2026-03-08 12:32:32] 2026-03-08 19:32:26,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592304174912)>', '<ExcThread(monitor, started 140591912441600)>']
[2026-03-08 12:32:32] 2026-03-08 19:32:26,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 12:32:32] 2026-03-08 19:32:26,880 | INFO     | [monitor] control thread has ended
[2026-03-08 12:32:32] 2026-03-08 19:32:31,741 | INFO     | all workflow threads have been joined
[2026-03-08 12:32:32] 2026-03-08 19:32:31,741 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 12:32:32] 2026-03-08 19:32:31,741 | INFO     | traces error code: 0
[2026-03-08 12:32:32] 2026-03-08 19:32:31,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 12:32:32] 2026-03-08 19:32:31,869 [wrapper] ==== pilot stdout END ====
[2026-03-08 12:32:32] 2026-03-08 19:32:31,870 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 12:32:32] 2026-03-08 19:32:31,879 [wrapper] pilotpid: 1076976
[2026-03-08 12:32:32] 2026-03-08 19:32:31,880 [wrapper] Pilot exit status: 0
[2026-03-08 12:32:32] 2026-03-08 19:32:31,904 [wrapper] pandaids: 7046355548
[2026-03-08 12:32:32] 2026-03-08 19:32:31,945 [wrapper] cleanup supervisor_pilot 1076982 1076977
[2026-03-08 12:32:32] 2026-03-08 19:32:31,951 [wrapper] Test setup, not cleaning
[2026-03-08 12:32:32] 2026-03-08 19:32:31,952 [wrapper] apfmon messages muted
[2026-03-08 12:32:32] 2026-03-08 19:32:31,958 [wrapper] ==== wrapper stdout END ====
[2026-03-08 12:32:32] 2026-03-08 19:32:31,967 [wrapper] ==== wrapper stderr END ====
[2026-03-08 12:32:32]  *** Error codes and diagnostics ***
[2026-03-08 12:32:32]     "exeErrorCode": 65,
[2026-03-08 12:32:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-08 12:32:32]     "pilotErrorCode": 1305,
[2026-03-08 12:32:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-08 12:32:32]  *** Listing of results directory ***
[2026-03-08 12:32:32] total 209592
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc    584627 Mar  8 07:46 pilot3.tar.gz
[2026-03-08 12:32:32] -rwx------. 1 boinc boinc     36322 Mar  8 07:48 runpilot2-wrapper.sh
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc      5111 Mar  8 07:49 queuedata.json
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc       100 Mar  8 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 12:32:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 12:27 run_atlas
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc       105 Mar  8 12:27 job.xml
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc      6593 Mar  8 12:27 init_data.xml
[2026-03-08 12:32:32] -rw-r--r--. 2 boinc boinc 210486969 Mar  8 12:27 EVNT.48966985._000640.pool.root.1
[2026-03-08 12:32:32] -rw-r--r--. 2 boinc boinc     15845 Mar  8 12:27 start_atlas.sh
[2026-03-08 12:32:32] drwxrwx--x. 2 boinc boinc      4096 Mar  8 12:27 shared
[2026-03-08 12:32:32] -rw-r--r--. 2 boinc boinc    597971 Mar  8 12:27 input.tar.gz
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc         0 Mar  8 12:27 boinc_lockfile
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc      2592 Mar  8 12:27 pandaJob.out
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc    999108 Mar  8 12:28 agis_schedconf.cvmfs.json
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc   1511578 Mar  8 12:28 agis_ddmendpoints.agis.ALL.json
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc       444 Mar  8 12:28 workernode_map.json
[2026-03-08 12:32:32] drwx------. 5 boinc boinc      4096 Mar  8 12:28 pilot3
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc       523 Mar  8 12:29 boinc_task_state.xml
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc       949 Mar  8 12:29 memory_monitor_summary.json
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc     21557 Mar  8 12:29 log.48966988._016431.job.log.tgz.1
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc      7013 Mar  8 12:31 heartbeat.json
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc        95 Mar  8 12:32 pilot_heartbeat.json
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc      4819 Mar  8 12:32 pilotlog.txt
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc      8192 Mar  8 12:32 boinc_mmap_file
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc     85555 Mar  8 12:32 log.48966988._016431.job.log.1
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc       188 Mar  8 12:32 output.list
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc       620 Mar  8 12:32 runtime_log
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc    122880 Mar  8 12:32 result.tar.gz
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc        22 Mar  8 12:32 wrapper_checkpoint.txt
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc      8635 Mar  8 12:32 runtime_log.err
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc       643 Mar  8 12:32 07oKDm4bUJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQVZLDm4escgm.diag
[2026-03-08 12:32:32] -rw-r--r--. 1 boinc boinc     21219 Mar  8 12:32 stderr.txt
[2026-03-08 12:32:32] No HITS result produced
[2026-03-08 12:32:32]  *** Contents of shared directory: ***
[2026-03-08 12:32:32] total 206280
[2026-03-08 12:32:32] -rw-r--r--. 2 boinc boinc 210486969 Mar  8 12:27 ATLAS.root_0
[2026-03-08 12:32:32] -rw-r--r--. 2 boinc boinc     15845 Mar  8 12:27 start_atlas.sh
[2026-03-08 12:32:32] -rw-r--r--. 2 boinc boinc    597971 Mar  8 12:27 input.tar.gz
[2026-03-08 12:32:32] -rw-------. 1 boinc boinc    122880 Mar  8 12:32 result.tar.gz
12:32:34 (1073253): run_atlas exited; CPU time 19.548342
12:32:34 (1073253): called boinc_finish(0)

</stderr_txt>
]]>

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