Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:02:33 (246936): wrapper (7.7.26015): starting
11:02:33 (246936): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 11:02:33] Arguments: --nthreads 8
[2026-03-08 11:02:33] Threads: 8
[2026-03-08 11:02:33] Checking for CVMFS
[2026-03-08 11:02:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 11:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 11:02:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 11:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 11:02:33] 2.13.3.0 2252556 45834 387172 157042 3 541 25233113 32935937 31960 16776704 1 133883783 99.464 185170429 13150 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-08 11:02:33] CVMFS is ok
[2026-03-08 11:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 11:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 11:02:33] Further information can be found at the LHC@home message board.
[2026-03-08 11:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 11:02:33] Checking for apptainer binary...
[2026-03-08 11:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 11:02:33] Running /usr/bin/apptainer --version
[2026-03-08 11:02:34] apptainer version 1.4.5-2.el9
[2026-03-08 11:02:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 11:02:34] c6-12-27-3.aglt2.org
[2026-03-08 11:02:34] apptainer works
[2026-03-08 11:02:34] Set ATHENA_PROC_NUMBER=8
[2026-03-08 11:02:34] Set ATHENA_CORE_NUMBER=8
[2026-03-08 11:02:34] Starting ATLAS job with PandaID=7032959804
[2026-03-08 11:02:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 14:04:27]  *** The last 200 lines of the pilot log: ***
[2026-03-08 14:04:27] 2026-03-08 18:03:35,894 | INFO     | monitor loop #640: job 0:7032959804 is in state 'finished'
[2026-03-08 14:04:27] 2026-03-08 18:03:35,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,948 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7032959804/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,953 | INFO     | extracted standard info from prmon json
[2026-03-08 14:04:27] 2026-03-08 18:03:35,953 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 14:04:27] 2026-03-08 18:03:35,953 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 14:04:27] 2026-03-08 18:03:35,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 14:04:27] 2026-03-08 18:03:35,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 14:04:27] 2026-03-08 18:03:35,957 | INFO     | fitting pss+swap vs Time
[2026-03-08 14:04:27] 2026-03-08 18:03:35,964 | INFO     | sum of square deviations: 1748880030.9438248
[2026-03-08 14:04:27] 2026-03-08 18:03:35,965 | INFO     | sum of deviations: 26847819017.02247
[2026-03-08 14:04:27] 2026-03-08 18:03:35,965 | INFO     | mean x: 1772987602.8314607
[2026-03-08 14:04:27] 2026-03-08 18:03:35,965 | INFO     | mean y: 2509015.0674157306
[2026-03-08 14:04:27] 2026-03-08 18:03:35,965 | INFO     | intersect: -27215395837.19088
[2026-03-08 14:04:27] 2026-03-08 18:03:35,966 | INFO     | chi2: 2.279658809248641
[2026-03-08 14:04:27] 2026-03-08 18:03:35,966 | INFO     | sum of square deviations: 1605608748.219656
[2026-03-08 14:04:27] 2026-03-08 18:03:35,967 | INFO     | sum of deviations: 37193005260.89017
[2026-03-08 14:04:27] 2026-03-08 18:03:35,967 | INFO     | mean x: 1772987450.3294797
[2026-03-08 14:04:27] 2026-03-08 18:03:35,967 | INFO     | mean y: 2519752.3352601156
[2026-03-08 14:04:27] 2026-03-08 18:03:35,967 | INFO     | intersect: -41067717091.301605
[2026-03-08 14:04:27] 2026-03-08 18:03:35,970 | INFO     | chi2: 1.5900920612294223
[2026-03-08 14:04:27] 2026-03-08 18:03:35,970 | INFO     | current chi2=1.5900920612294223 (change=30.248682180931052 %)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,970 | INFO     | sum of square deviations: 1470383395.9940424
[2026-03-08 14:04:27] 2026-03-08 18:03:35,971 | INFO     | sum of deviations: 35974816693.624985
[2026-03-08 14:04:27] 2026-03-08 18:03:35,972 | INFO     | mean x: 1772987297.827381
[2026-03-08 14:04:27] 2026-03-08 18:03:35,972 | INFO     | mean y: 2518378.125
[2026-03-08 14:04:27] 2026-03-08 18:03:35,972 | INFO     | intersect: -43375891098.77578
[2026-03-08 14:04:27] 2026-03-08 18:03:35,972 | INFO     | chi2: 1.590433849549802
[2026-03-08 14:04:27] 2026-03-08 18:03:35,972 | INFO     | current chi2=1.590433849549802 (change=-0.02149487622216823 %)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,972 | INFO     | right removable region: 167
[2026-03-08 14:04:27] 2026-03-08 18:03:35,973 | INFO     | sum of square deviations: 1605594232.8786142
[2026-03-08 14:04:27] 2026-03-08 18:03:35,974 | INFO     | sum of deviations: -4460783101.768786
[2026-03-08 14:04:27] 2026-03-08 18:03:35,974 | INFO     | mean x: 1772987755.3410404
[2026-03-08 14:04:27] 2026-03-08 18:03:35,974 | INFO     | mean y: 2542025.8265895955
[2026-03-08 14:04:27] 2026-03-08 18:03:35,974 | INFO     | intersect: 4928390447.995288
[2026-03-08 14:04:27] 2026-03-08 18:03:35,974 | INFO     | chi2: 0.7365461908550675
[2026-03-08 14:04:27] 2026-03-08 18:03:35,974 | INFO     | current chi2=0.7365461908550675 (change=67.69050755021416 %)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,975 | INFO     | sum of square deviations: 1470355097.2797577
[2026-03-08 14:04:27] 2026-03-08 18:03:35,975 | INFO     | sum of deviations: -6008494788.178572
[2026-03-08 14:04:27] 2026-03-08 18:03:35,976 | INFO     | mean x: 1772987907.8511906
[2026-03-08 14:04:27] 2026-03-08 18:03:35,976 | INFO     | mean y: 2543698.3928571427
[2026-03-08 14:04:27] 2026-03-08 18:03:35,976 | INFO     | intersect: 7247724555.409067
[2026-03-08 14:04:27] 2026-03-08 18:03:35,976 | INFO     | chi2: 0.7130824164542772
[2026-03-08 14:04:27] 2026-03-08 18:03:35,976 | INFO     | current chi2=0.7130824164542772 (change=3.1856487335235335 %)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,976 | INFO     | left removable region: 20
[2026-03-08 14:04:27] 2026-03-08 18:03:35,977 | INFO     | sum of square deviations: 985011944.42177
[2026-03-08 14:04:27] 2026-03-08 18:03:35,977 | INFO     | sum of deviations: 2918979742.4966
[2026-03-08 14:04:27] 2026-03-08 18:03:35,978 | INFO     | mean x: 1772987877.3741496
[2026-03-08 14:04:27] 2026-03-08 18:03:35,978 | INFO     | mean y: 2557874.9727891157
[2026-03-08 14:04:27] 2026-03-08 18:03:35,978 | INFO     | intersect: -5251506024.511441
[2026-03-08 14:04:27] 2026-03-08 18:03:35,978 | INFO     | chi2: 0.0015224969242860424
[2026-03-08 14:04:27] 2026-03-08 18:03:35,978 | INFO     | current memory leak: 2.96 B/s (using 147 data points, chi2=0.00)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | could have reported an average CPU frequency of 2747 MHz (9 samples)
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | ..............................
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | . Timing measurements:
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | . get job = 0 s
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | . initial setup = 11 s
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | . payload setup = 9 s
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | . stage-in = 0 s
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | . payload execution = 10810 s
[2026-03-08 14:04:27] 2026-03-08 18:03:35,979 | INFO     | . stage-out = 2 s
[2026-03-08 14:04:27] 2026-03-08 18:03:35,980 | INFO     | . log creation = 0 s
[2026-03-08 14:04:27] 2026-03-08 18:03:35,980 | INFO     | ..............................
[2026-03-08 14:04:27] 2026-03-08 18:03:36,071 | INFO     | 
[2026-03-08 14:04:27] 2026-03-08 18:03:36,071 | INFO     | job summary report
[2026-03-08 14:04:27] 2026-03-08 18:03:36,071 | INFO     | --------------------------------------------------
[2026-03-08 14:04:27] 2026-03-08 18:03:36,071 | INFO     | PanDA job id: 7032959804
[2026-03-08 14:04:27] 2026-03-08 18:03:36,071 | INFO     | task id: 48842595
[2026-03-08 14:04:27] 2026-03-08 18:03:36,071 | INFO     | errors: (none)
[2026-03-08 14:04:27] 2026-03-08 18:03:36,071 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | pilot state: finished 
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | transexitcode: 0
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | exeerrorcode: 0
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | exeerrordiag: 
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | exitcode: 0
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | exitmsg: OK
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | cpuconsumptiontime: 43618 s
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | nevents: 400
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | neventsw: 0
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | pid: 257104
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | pgrp: 257104
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | corecount: 8
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | event service: False
[2026-03-08 14:04:27] 2026-03-08 18:03:36,072 | INFO     | sizes: {0: 2288497, 1: 2295888, 10824: 2324569, 10828: 2333567, 10830: 2333623, 10832: 2333881}
[2026-03-08 14:04:27] 2026-03-08 18:03:36,073 | INFO     | --------------------------------------------------
[2026-03-08 14:04:27] 2026-03-08 18:03:36,073 | INFO     | 
[2026-03-08 14:04:27] 2026-03-08 18:03:36,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 14:04:27] 2026-03-08 18:03:36,094 | INFO     | job 7032959804 has completed (purged errors)
[2026-03-08 14:04:27] 2026-03-08 18:03:36,095 | INFO     | overall cleanup function is called
[2026-03-08 14:04:27] 2026-03-08 18:03:37,104 | INFO     | --- collectZombieJob: --- 10, [257104]
[2026-03-08 14:04:27] 2026-03-08 18:03:37,104 | INFO     | zombie collector waiting for pid 257104
[2026-03-08 14:04:27] 2026-03-08 18:03:37,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 14:04:27] 2026-03-08 18:03:37,104 | INFO     | collected zombie processes
[2026-03-08 14:04:27] 2026-03-08 18:03:37,104 | INFO     | will attempt to kill all subprocesses of pid=257104
[2026-03-08 14:04:27] 2026-03-08 18:03:37,624 | INFO     | process IDs to be killed: [257104] (in reverse order)
[2026-03-08 14:04:27] 2026-03-08 18:03:37,754 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 14:04:27] 2026-03-08 18:03:37,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 14:04:27] 2026-03-08 18:03:37,796 | INFO     | did not find any defunct processes belonging to 257104
[2026-03-08 14:04:27] 2026-03-08 18:03:37,817 | INFO     | did not find any defunct processes belonging to 257104
[2026-03-08 14:04:27] 2026-03-08 18:03:37,818 | INFO     | ready for new job
[2026-03-08 14:04:27] 2026-03-08 18:03:37,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 14:04:27] 2026-03-08 18:03:37,819 | INFO     | **************************************
[2026-03-08 14:04:27] 2026-03-08 18:03:37,820 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 14:04:27] 2026-03-08 18:03:37,820 | INFO     | **************************************
[2026-03-08 14:04:27] 2026-03-08 18:03:37,820 | INFO     | 
[2026-03-08 14:04:27] 2026-03-08 18:03:37,825 | INFO     | architecture information:
[2026-03-08 14:04:27] 2026-03-08 18:03:37,826 | INFO     | executing command: cat /etc/os-release
[2026-03-08 14:04:27] 2026-03-08 18:03:37,844 | INFO     | cat /etc/os-release:
[2026-03-08 14:04:27] NAME="CentOS Linux"
[2026-03-08 14:04:27] VERSION="7 (Core)"
[2026-03-08 14:04:27] ID="centos"
[2026-03-08 14:04:27] ID_LIKE="rhel fedora"
[2026-03-08 14:04:27] VERSION_ID="7"
[2026-03-08 14:04:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 14:04:27] ANSI_COLOR="0;31"
[2026-03-08 14:04:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 14:04:27] HOME_URL="https://www.centos.org/"
[2026-03-08 14:04:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 14:04:27] 
[2026-03-08 14:04:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 14:04:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 14:04:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 14:04:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 14:04:27] 
[2026-03-08 14:04:27] 2026-03-08 18:03:37,845 | INFO     | **************************************
[2026-03-08 14:04:27] 2026-03-08 18:03:38,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-08 14:04:27] 2026-03-08 18:03:38,377 | INFO     | sufficient remaining disk space (93954506752 B)
[2026-03-08 14:04:27] 2026-03-08 18:03:38,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 14:04:27] 2026-03-08 18:03:38,377 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 14:04:27] 2026-03-08 18:03:38,377 | INFO     | update_server=False
[2026-03-08 14:04:27] 2026-03-08 18:03:38,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 14:04:27] 2026-03-08 18:03:38,399 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-08 14:04:27] 2026-03-08 18:03:38,399 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-08 14:04:27] 2026-03-08 18:03:38,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:04:27] 2026-03-08 18:03:38,399 | INFO     | will abort loop
[2026-03-08 14:04:27] 2026-03-08 18:03:38,524 | INFO     | all payload control threads have been joined
[2026-03-08 14:04:27] 2026-03-08 18:03:38,573 | INFO     | all data control threads have been joined
[2026-03-08 14:04:27] 2026-03-08 18:03:39,383 | INFO     | [job] retrieve thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:39,405 | INFO     | [job] job monitor thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:39,524 | INFO     | all job control threads have been joined
[2026-03-08 14:04:27] 2026-03-08 18:03:39,532 | INFO     | [payload] control thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:39,579 | INFO     | [data] control thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:39,629 | INFO     | [data] copytool_in thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:39,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 14:04:27] 2026-03-08 18:03:40,193 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:40,248 | INFO     | [job] validate thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:40,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 14:04:27] 2026-03-08 18:03:40,388 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:40,506 | INFO     | [payload] failed_post thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:40,526 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:40,532 | INFO     | [job] control thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:40,562 | INFO     | [payload] validate_post thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:40,722 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:41,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:04:27] 2026-03-08 18:03:41,713 | INFO     | [data] copytool_out thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:42,103 | INFO     | [job] queue monitor thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:03:44,330 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 14:04:27] 2026-03-08 18:04:08,996 | INFO     | PID=250639 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 14:04:27] 2026-03-08 18:04:08,996 | INFO     | .. there are 35 such processes running
[2026-03-08 14:04:27] 2026-03-08 18:04:08,997 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 14:04:27] 2026-03-08 18:04:08,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 14:04:27] 2026-03-08 18:04:08,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 14:04:27] 2026-03-08 18:04:21,040 | INFO     | [monitor] cgroup control has ended
[2026-03-08 14:04:27] 2026-03-08 18:04:21,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015704041280)>', '<ExcThread(monitor, started 140014985930496)>']
[2026-03-08 14:04:27] 2026-03-08 18:04:22,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 14:04:27] 2026-03-08 18:04:22,075 | INFO     | [monitor] control thread has ended
[2026-03-08 14:04:27] 2026-03-08 18:04:26,575 | INFO     | all workflow threads have been joined
[2026-03-08 14:04:27] 2026-03-08 18:04:26,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 14:04:27] 2026-03-08 18:04:26,575 | INFO     | traces error code: 0
[2026-03-08 14:04:27] 2026-03-08 18:04:26,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 14:04:27] 2026-03-08 18:04:27,029 [wrapper] ==== pilot stdout END ====
[2026-03-08 14:04:27] 2026-03-08 18:04:27,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 14:04:27] 2026-03-08 18:04:27,034 [wrapper] pilotpid: 250639
[2026-03-08 14:04:27] 2026-03-08 18:04:27,036 [wrapper] Pilot exit status: 0
[2026-03-08 14:04:27] 2026-03-08 18:04:27,095 [wrapper] pandaids: 7032959804
[2026-03-08 14:04:27] 2026-03-08 18:04:27,222 [wrapper] cleanup supervisor_pilot  774284 250640
[2026-03-08 14:04:27] 2026-03-08 18:04:27,225 [wrapper] Test setup, not cleaning
[2026-03-08 14:04:27] 2026-03-08 18:04:27,228 [wrapper] apfmon messages muted
[2026-03-08 14:04:27] 2026-03-08 18:04:27,231 [wrapper] ==== wrapper stdout END ====
[2026-03-08 14:04:27] 2026-03-08 18:04:27,233 [wrapper] ==== wrapper stderr END ====
[2026-03-08 14:04:27]  *** Error codes and diagnostics ***
[2026-03-08 14:04:27]     "exeErrorCode": 0,
[2026-03-08 14:04:27]     "exeErrorDiag": "",
[2026-03-08 14:04:27]     "pilotErrorCode": 0,
[2026-03-08 14:04:27]     "pilotErrorDiag": "",
[2026-03-08 14:04:27]  *** Listing of results directory ***
[2026-03-08 14:04:27] total 473920
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 05:26 pilot3.tar.gz
[2026-03-08 14:04:27] -rwx------. 1 boincer umatlas     36322 Feb 28 05:30 runpilot2-wrapper.sh
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 05:31 queuedata.json
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas       100 Mar  8 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 14:04:27] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 11:02 run_atlas
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas       105 Mar  8 11:02 job.xml
[2026-03-08 14:04:27] -rw-r--r--. 2 boincer umatlas 276371832 Mar  8 11:02 EVNT.48448741._000003.pool.root.1
[2026-03-08 14:04:27] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 11:02 start_atlas.sh
[2026-03-08 14:04:27] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 11:02 shared
[2026-03-08 14:04:27] -rw-r--r--. 2 boincer umatlas    597969 Mar  8 11:02 input.tar.gz
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas         0 Mar  8 11:02 boinc_lockfile
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas      2600 Mar  8 11:02 pandaJob.out
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas        57 Mar  8 11:02 setup.sh.local
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas    999212 Mar  8 11:02 agis_schedconf.cvmfs.json
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas       443 Mar  8 11:03 workernode_map.json
[2026-03-08 14:04:27] drwx------. 5 boincer umatlas      4096 Mar  8 11:03 pilot3
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas      6879 Mar  8 14:02 init_data.xml
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas       530 Mar  8 14:02 boinc_task_state.xml
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas 201494264 Mar  8 14:02 HITS.48842595._000055.pool.root.1
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas      1040 Mar  8 14:03 memory_monitor_summary.json
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas   1521291 Mar  8 14:03 agis_ddmendpoints.agis.ALL.json
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas    392232 Mar  8 14:03 log.48842595._000055.job.log.tgz.1
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas      6383 Mar  8 14:03 heartbeat.json
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas        28 Mar  8 14:04 wrapper_checkpoint.txt
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas        95 Mar  8 14:04 pilot_heartbeat.json
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas      5005 Mar  8 14:04 pilotlog.txt
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas   1354096 Mar  8 14:04 log.48842595._000055.job.log.1
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 14:04 boinc_mmap_file
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas       357 Mar  8 14:04 output.list
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas       620 Mar  8 14:04 runtime_log
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas   1761280 Mar  8 14:04 result.tar.gz
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas      9352 Mar  8 14:04 runtime_log.err
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas       656 Mar  8 14:04 8F1LDmQlWG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVG5KDmXAU0ym.diag
[2026-03-08 14:04:27] -rw-r--r--. 1 boincer umatlas     21149 Mar  8 14:04 stderr.txt
[2026-03-08 14:04:27] HITS file was successfully produced:
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas 201494264 Mar  8 14:02 shared/HITS.pool.root.1
[2026-03-08 14:04:27]  *** Contents of shared directory: ***
[2026-03-08 14:04:27] total 468996
[2026-03-08 14:04:27] -rw-r--r--. 2 boincer umatlas 276371832 Mar  8 11:02 ATLAS.root_0
[2026-03-08 14:04:27] -rw-r--r--. 2 boincer umatlas     15845 Mar  8 11:02 start_atlas.sh
[2026-03-08 14:04:27] -rw-r--r--. 2 boincer umatlas    597969 Mar  8 11:02 input.tar.gz
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas 201494264 Mar  8 14:02 HITS.pool.root.1
[2026-03-08 14:04:27] -rw-------. 1 boincer umatlas   1761280 Mar  8 14:04 result.tar.gz
14:04:48 (246936): run_atlas exited; CPU time 44108.940320
14:04:48 (246936): called boinc_finish(0)

</stderr_txt>
]]>

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